Cow genome map

Conread name: mCP0-MI-P-CP0-nvg-d-03-0-UI.s2

Conread position: 20-559
Cow position: chr20:11176648-11176089 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 50

Conread position: 31-436
Cow position: chr20:19410755-19410338 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 189

Conread position: 32-640
Cow position: chr20:20983637-20984239 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 31

Conread position: 32-653
Cow position: chr20:29844654-29845310 (view UCSC Genome Browser custom track)
Alignm length: 670
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 288

Conread position: 33-402
Cow position: chr20:31845969-31845570 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 69

Conread position: 33-403
Cow position: chr20:31077148-31077544 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 285

Conread position: 33-404
Cow position: chr20:14756457-14756076 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 203

Conread position: 33-404
Cow position: chr20:23679541-23679156 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 278

Conread position: 33-405
Cow position: chr20:10178483-10178106 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 57

Conread position: 33-407
Cow position: chr20:581309-580929 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 202

Conread position: 33-407
Cow position: chr20:12048020-12048388 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 201

Conread position: 33-407
Cow position: chr20:17734164-17733780 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 205

Conread position: 33-407
Cow position: chr20:18185185-18185561 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 269

Conread position: 33-407
Cow position: chr20:24391607-24391974 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 148

Conread position: 33-407
Cow position: chr20:34001777-34001398 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 268

Conread position: 33-407
Cow position: chr20:34597511-34597106 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 279
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 48, 131

Conread position: 33-434
Cow position: chr20:10538934-10539339 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 231

Conread position: 33-521
Cow position: chr20:12442084-12441571 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 112

Conread position: 33-555
Cow position: chr20:6096872-6096335 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 233

Conread position: 33-574
Cow position: chr20:9536749-9537311 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 272

Conread position: 33-574
Cow position: chr20:23871208-23870640 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 206

Conread position: 33-575
Cow position: chr20:17845560-17846136 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 215

Conread position: 33-582
Cow position: chr20:23065231-23064648 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 289

Conread position: 33-603
Cow position: chr20:40781589-40782172 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 163

Conread position: 33-623
Cow position: chr20:9433224-9433807 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 87

Conread position: 33-626
Cow position: chr20:10468687-10469273 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 99

Conread position: 33-636
Cow position: chr20:3599785-3599164 (view UCSC Genome Browser custom track)
Alignm length: 643
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 64

Conread position: 33-637
Cow position: chr20:24399014-24398404 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 84

Conread position: 33-640
Cow position: chr20:8429363-8429984 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 197

Conread position: 33-640
Cow position: chr20:40423483-40422856 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 32

Conread position: 33-644
Cow position: chr20:13493349-13493972 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 264

Conread position: 33-650
Cow position: chr20:21019178-21019811 (view UCSC Genome Browser custom track)
Alignm length: 654
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 64

Conread position: 33-652
Cow position: chr20:4945633-4944995 (view UCSC Genome Browser custom track)
Alignm length: 651
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 256

Conread position: 33-655
Cow position: chr20:4756210-4755577 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 226

Conread position: 33-655
Cow position: chr20:6239035-6238371 (view UCSC Genome Browser custom track)
Alignm length: 665
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 33-655
Cow position: chr20:32846965-32847601 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 273

Conread position: 33-657
Cow position: chr20:13652751-13652116 (view UCSC Genome Browser custom track)
Alignm length: 655
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 111

Conread position: 33-657
Cow position: chr20:35145619-35146273 (view UCSC Genome Browser custom track)
Alignm length: 665
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 554

Conread position: 33-659
Cow position: chr20:31927846-31927198 (view UCSC Genome Browser custom track)
Alignm length: 657
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 331

Conread position: 33-661
Cow position: chr20:12996401-12995733 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 280

Conread position: 33-662
Cow position: chr20:10199978-10200614 (view UCSC Genome Browser custom track)
Alignm length: 659
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 72

Conread position: 33-662
Cow position: chr20:36780123-36779454 (view UCSC Genome Browser custom track)
Alignm length: 680
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 128

Conread position: 34-649
Cow position: chr20:23792215-23792851 (view UCSC Genome Browser custom track)
Alignm length: 657
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 202

Conread position: 34-660
Cow position: chr20:14806499-14807147 (view UCSC Genome Browser custom track)
Alignm length: 665
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 29

Conread position: 35-543
Cow position: chr20:19363747-19363215 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 95

Conread position: 35-558
Cow position: chr20:9473999-9473468 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 272

Conread position: 35-661
Cow position: chr20:746574-747195 (view UCSC Genome Browser custom track)
Alignm length: 656
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 174

Conread position: 36-404
Cow position: chr20:3781817-3781435 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 278

Conread position: 36-404
Cow position: chr20:33176815-33177181 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 146

Conread position: 36-619
Cow position: chr20:10818609-10818019 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 93

Conread position: 36-621
Cow position: chr20:7806947-7806343 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 326

Conread position: 36-621
Cow position: chr20:31747008-31746413 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 202

Conread position: 36-638
Cow position: chr20:8577863-8578495 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 200

Conread position: 36-648
Cow position: chr20:20353299-20352660 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 213

Conread position: 36-651
Cow position: chr20:398674-398059 (view UCSC Genome Browser custom track)
Alignm length: 643
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 28

Conread position: 36-655
Cow position: chr20:39418266-39417646 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 72

Conread position: 36-656
Cow position: chr20:10235467-10236076 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 322

Conread position: 36-660
Cow position: chr20:10913719-10913079 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 217

Conread position: 37-404
Cow position: chr20:3034719-3035095 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 200

Conread position: 37-404
Cow position: chr20:35958288-35958637 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 46

Conread position: 37-428
Cow position: chr20:19146484-19146893 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 33

Conread position: 37-621
Cow position: chr20:6423584-6424177 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 40

Conread position: 37-640
Cow position: chr20:34202265-34202884 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 287

Conread position: 37-649
Cow position: chr20:2819191-2819797 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 421
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 74, 29

Conread position: 39-396
Cow position: chr20:41977041-41977398 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 263
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 69, 194

Conread position: 39-467
Cow position: chr20:5104816-5104378 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 195

Conread position: 39-573
Cow position: chr20:18321176-18320615 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 317

Conread position: 39-634
Cow position: chr20:40176871-40177480 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 117

Conread position: 39-657
Cow position: chr20:20966975-20967581 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 137

Conread position: 40-652
Cow position: chr20:5702367-5702976 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 318

Conread position: 43-636
Cow position: chr20:30817158-30817758 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 271

Conread position: 45-632
Cow position: chr20:4621717-4621107 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 219

Conread position: 46-407
Cow position: chr20:33170246-33169878 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 187

Conread position: 46-511
Cow position: chr20:6501426-6501910 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 17

Conread position: 47-636
Cow position: chr20:33531936-33532528 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 235

Conread position: 48-644
Cow position: chr20:13877082-13876463 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 293

Conread position: 49-407
Cow position: chr20:40256617-40256965 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 20

Conread position: 54-407
Cow position: chr20:19313432-19313069 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 154

Conread position: 56-636
Cow position: chr20:40304213-40303644 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 232

Conread position: 60-654
Cow position: chr20:28982341-28982958 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 170

Conread position: 64-555
Cow position: chr20:39415398-39415910 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 41

Conread position: 66-407
Cow position: chr20:17903804-17904154 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 236

Conread position: 66-537
Cow position: chr20:41119568-41120036 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 247
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 41, 157

Conread position: 73-613
Cow position: chr20:22959691-22959130 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 157

Conread position: 76-408
Cow position: chr20:12334038-12334370 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 81

Conread position: 76-577
Cow position: chr20:19750967-19751489 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 89

Conread position: 76-657
Cow position: chr20:38817671-38818248 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 128

Conread position: 101-555
Cow position: chr20:33144865-33144393 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 113

Conread position: 102-658
Cow position: chr20:31740523-31739957 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 144

Conread position: 103-406
Cow position: chr20:18399451-18399757 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 123

Conread position: 103-640
Cow position: chr20:33435472-33434917 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 106

Conread position: 103-659
Cow position: chr20:19328092-19328659 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 123

Conread position: 106-407
Cow position: chr20:7132052-7132348 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 106-407
Cow position: chr20:15068841-15069135 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 217
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 60, 233

Conread position: 106-659
Cow position: chr20:24069508-24070063 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 105

Conread position: 106-660
Cow position: chr20:17251404-17251981 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 121

Conread position: 108-403
Cow position: chr20:24002024-24002303 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 117

Conread position: 109-572
Cow position: chr20:9412192-9412664 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 119

Conread position: 109-636
Cow position: chr20:5998978-5998423 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 199

Conread position: 110-407
Cow position: chr20:35797304-35797603 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 18

Conread position: 110-639
Cow position: chr20:21345099-21345680 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 110-652
Cow position: chr20:39398177-39398736 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 125

Conread position: 110-656
Cow position: chr20:19236788-19237330 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 115

Conread position: 112-402
Cow position: chr20:31069341-31069627 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 216
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 51, 116

Conread position: 112-629
Cow position: chr20:13751945-13752444 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 109

Conread position: 113-661
Cow position: chr20:6054805-6054244 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 106

Conread position: 115-636
Cow position: chr20:6240827-6240282 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 238

Conread position: 123-574
Cow position: chr20:39728161-39728630 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 101

Conread position: 123-629
Cow position: chr20:7426479-7425967 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 20

Conread position: 124-569
Cow position: chr20:38579025-38578594 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 320
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 285, 44

Conread position: 127-579
Cow position: chr20:10884652-10884169 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 229

Conread position: 127-638
Cow position: chr20:25009926-25009393 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 336

Conread position: 130-577
Cow position: chr20:42469484-42469941 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 95

Conread position: 134-648
Cow position: chr20:36997437-36997945 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 217

Conread position: 147-559
Cow position: chr20:6903071-6903479 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 268
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 24, 7

Conread position: 155-404
Cow position: chr20:20312986-20312755 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 157-407
Cow position: chr20:13967507-13967265 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 134

Conread position: 157-463
Cow position: chr20:24521503-24521817 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 116

Conread position: 157-640
Cow position: chr20:22064825-22065303 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 44

Conread position: 157-648
Cow position: chr20:21714504-21715039 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 23

Conread position: 157-662
Cow position: chr20:22235064-22235563 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 135

Conread position: 163-640
Cow position: chr20:15549140-15548650 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 115

Conread position: 164-403
Cow position: chr20:15582276-15582047 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 164-561
Cow position: chr20:40127577-40127177 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 128

Conread position: 164-573
Cow position: chr20:31799435-31799025 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 54

Conread position: 164-636
Cow position: chr20:12582188-12581718 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 109

Conread position: 165-658
Cow position: chr20:7659449-7658965 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 239, 39

Conread position: 166-647
Cow position: chr20:11341044-11340556 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 180

Conread position: 167-648
Cow position: chr20:39517774-39518261 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 30

Conread position: 168-402
Cow position: chr20:32636802-32636579 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 180
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 122, 0

Conread position: 168-421
Cow position: chr20:21016243-21016498 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 198
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 175, 38

Conread position: 168-549
Cow position: chr20:35999451-35999846 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 69

Conread position: 168-653
Cow position: chr20:10208568-10209062 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 6

Conread position: 170-662
Cow position: chr20:32512748-32513269 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 186

Conread position: 171-662
Cow position: chr20:5950866-5950375 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 47

Conread position: 172-406
Cow position: chr20:3331527-3331294 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 0

Conread position: 173-410
Cow position: chr20:41703922-41704163 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 216

Conread position: 174-662
Cow position: chr20:8556504-8556006 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 33

Conread position: 174-662
Cow position: chr20:35177004-35176511 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 79

Conread position: 175-407
Cow position: chr20:38873239-38873013 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 172
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 140, 9

Conread position: 177-660
Cow position: chr20:13023707-13023240 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 114

Conread position: 177-660
Cow position: chr20:17584187-17584688 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 336
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 50, 65

Conread position: 180-377
Cow position: chr20:8910699-8910886 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 154
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 102, 0

Conread position: 180-417
Cow position: chr20:4205738-4205973 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 162

Conread position: 180-424
Cow position: chr20:34918055-34918283 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 178
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 12, 0

Conread position: 180-635
Cow position: chr20:14572579-14572140 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 12

Conread position: 180-644
Cow position: chr20:14620497-14620060 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 346, 38

Conread position: 181-404
Cow position: chr20:40185897-40185690 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 171
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 43, 0

Conread position: 181-407
Cow position: chr20:8020670-8020892 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 172
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 12, 42

Conread position: 181-407
Cow position: chr20:14735453-14735670 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 181-543
Cow position: chr20:21928674-21929053 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 270
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 39, 107

Conread position: 181-553
Cow position: chr20:42459075-42458698 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 260
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 228, 42

Conread position: 181-569
Cow position: chr20:34776962-34777350 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 109

Conread position: 181-638
Cow position: chr20:14759888-14759433 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 139

Conread position: 181-640
Cow position: chr20:12420845-12420377 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 116

Conread position: 181-640
Cow position: chr20:22007280-22007727 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 306, 96

Conread position: 181-649
Cow position: chr20:7442348-7441891 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 108

Conread position: 181-654
Cow position: chr20:18551139-18551619 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 72

Conread position: 181-660
Cow position: chr20:13829043-13829522 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 27

Conread position: 182-407
Cow position: chr20:11923464-11923248 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 177
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 11, 102

Conread position: 182-407
Cow position: chr20:37200137-37200353 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 169
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 26, 0

Conread position: 182-657
Cow position: chr20:26996311-26996794 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 36

Conread position: 184-403
Cow position: chr20:40511978-40511768 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 169
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 128, 34

Conread position: 185-407
Cow position: chr20:35009960-35009749 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 165
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 176, 21

Conread position: 185-574
Cow position: chr20:5826717-5827119 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 156

Conread position: 185-660
Cow position: chr20:1139993-1139505 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 113

Conread position: 185-661
Cow position: chr20:11741523-11741053 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 35

Conread position: 186-407
Cow position: chr20:23936635-23936413 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 43

Conread position: 189-648
Cow position: chr20:14879570-14880035 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 96

Conread position: 192-404
Cow position: chr20:5025515-5025313 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 164
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 100, 0

Conread position: 192-404
Cow position: chr20:26469276-26469072 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 167
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 118, 16

Conread position: 192-407
Cow position: chr20:26679911-26680120 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 170
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 29, 0

Conread position: 192-555
Cow position: chr20:11482352-11481975 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 150

Conread position: 192-657
Cow position: chr20:382339-381871 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 6

Conread position: 192-657
Cow position: chr20:28296077-28296557 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 85

Conread position: 192-662
Cow position: chr20:39675606-39675139 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 70

Conread position: 193-378
Cow position: chr20:24902684-24902497 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 157
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 20, 154

Conread position: 193-407
Cow position: chr20:6848410-6848620 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 166
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 134, 30

Conread position: 193-544
Cow position: chr20:15235552-15235901 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 254
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 42, 19

Conread position: 194-404
Cow position: chr20:32069069-32068861 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 149

Conread position: 194-407
Cow position: chr20:35907257-35907057 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 166
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 24, 0

Conread position: 195-401
Cow position: chr20:34251888-34251689 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 168
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 143, 78

Conread position: 195-403
Cow position: chr20:35760461-35760660 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 156
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 109, 0

Conread position: 195-637
Cow position: chr20:11007990-11008412 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 43

Conread position: 196-407
Cow position: chr20:9379200-9379404 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 0

Conread position: 197-455
Cow position: chr20:38415180-38414926 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 182
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 26, 94

Conread position: 197-655
Cow position: chr20:16935512-16935049 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 145

Conread position: 198-654
Cow position: chr20:38551167-38551634 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 67

Conread position: 200-620
Cow position: chr20:38486753-38486335 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 118

Conread position: 200-655
Cow position: chr20:39325180-39325649 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 148

Conread position: 201-380
Cow position: chr20:5116508-5116334 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 147
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 17, 0

Conread position: 201-647
Cow position: chr20:29754582-29755027 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 305
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 82, 223

Conread position: 202-568
Cow position: chr20:15566034-15565654 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 162

Conread position: 208-662
Cow position: chr20:34098155-34097684 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 69

Conread position: 209-407
Cow position: chr20:5269265-5269078 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 152
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 75, 0

Conread position: 209-574
Cow position: chr20:20739485-20739108 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 81

Conread position: 210-543
Cow position: chr20:11542479-11542139 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 241
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 15, 96

Conread position: 210-551
Cow position: chr20:31323602-31323943 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 239
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 33, 83

Conread position: 210-653
Cow position: chr20:23846867-23846408 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 102

Conread position: 211-640
Cow position: chr20:27408069-27407653 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 17

Conread position: 212-402
Cow position: chr20:11043689-11043513 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 144
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 69, 0

Conread position: 212-551
Cow position: chr20:34107923-34108261 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 233
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 197, 39

Conread position: 212-662
Cow position: chr20:6602848-6603293 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 312
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 197, 74

Conread position: 213-644
Cow position: chr20:12239872-12239444 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 269

Conread position: 214-400
Cow position: chr20:13994618-13994801 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 158
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 0

Conread position: 214-568
Cow position: chr20:9923406-9923740 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 237
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 56, 0

Conread position: 217-403
Cow position: chr20:36207614-36207795 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 141
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 124, 0

Conread position: 220-375
Cow position: chr20:37165541-37165688 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 126
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 72, 0

Conread position: 221-388
Cow position: chr20:35741569-35741729 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 129
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 145, 59

Conread position: 221-407
Cow position: chr20:34240340-34240529 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 146
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 7, 0

Conread position: 221-428
Cow position: chr20:11864320-11864113 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 162
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 188, 72

Conread position: 221-640
Cow position: chr20:14980698-14980265 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 6

Conread position: 222-649
Cow position: chr20:11045495-11045925 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 292
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 188, 59

Conread position: 223-648
Cow position: chr20:3740183-3739759 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 287
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 11, 60

Conread position: 227-403
Cow position: chr20:37272538-37272704 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 140
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 28, 0

Conread position: 232-647
Cow position: chr20:3569233-3568838 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 235-619
Cow position: chr20:3321308-3320911 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 288
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 174, 55

Conread position: 235-639
Cow position: chr20:3254878-3255275 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 107

Conread position: 236-407
Cow position: chr20:28831794-28831963 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 139
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 33, 107

Conread position: 244-407
Cow position: chr20:41403408-41403571 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 94, 52

Conread position: 244-558
Cow position: chr20:42197166-42197476 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 215
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 102, 117

Conread position: 244-572
Cow position: chr20:14100599-14100260 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 241
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 164, 23

Conread position: 244-658
Cow position: chr20:5814409-5814825 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 98

Conread position: 245-400
Cow position: chr20:9701735-9701588 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 126
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 144, 20

Conread position: 245-401
Cow position: chr20:15312499-15312652 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 123
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 66, 97

Conread position: 245-587
Cow position: chr20:271583-271231 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 244
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 126, 47

Conread position: 246-387
Cow position: chr20:7210877-7211014 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 95, 0

Conread position: 246-616
Cow position: chr20:283088-282733 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 251
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 254, 100

Conread position: 246-650
Cow position: chr20:34221314-34221737 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 99

Conread position: 248-400
Cow position: chr20:10348593-10348734 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 248-407
Cow position: chr20:32988989-32988845 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 125
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 128, 34

Conread position: 248-547
Cow position: chr20:13025765-13025458 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 220
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 148, 22

Conread position: 248-569
Cow position: chr20:2169865-2169551 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 216
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 84, 94

Conread position: 248-600
Cow position: chr20:5755266-5755616 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 242
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 153, 42

Conread position: 248-659
Cow position: chr20:29990596-29990188 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 251-403
Cow position: chr20:31080889-31081031 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 251-574
Cow position: chr20:5636326-5636661 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 238
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 158, 94

Conread position: 251-644
Cow position: chr20:15569104-15568717 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 281
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 155, 91

Conread position: 252-407
Cow position: chr20:41309383-41309532 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 121
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 73, 0

Conread position: 253-652
Cow position: chr20:5025095-5024713 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 286
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 155, 39

Conread position: 255-559
Cow position: chr20:36010639-36010959 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 232
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 154, 91

Conread position: 257-412
Cow position: chr20:18500071-18500213 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 123
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 109, 25

Conread position: 257-532
Cow position: chr20:40449859-40450159 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 218
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 65, 16

Conread position: 257-640
Cow position: chr20:30710798-30710401 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 86

Conread position: 258-636
Cow position: chr20:4334667-4334300 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 274
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 143, 44

Conread position: 258-657
Cow position: chr20:41089941-41089533 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 284
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 108, 83

Conread position: 259-382
Cow position: chr20:9729939-9730055 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 107
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 33, 0

Conread position: 259-400
Cow position: chr20:20934909-20934768 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 80, 33

Conread position: 259-403
Cow position: chr20:39247763-39247901 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 52, 0

Conread position: 261-650
Cow position: chr20:14917156-14917525 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 27

Conread position: 261-655
Cow position: chr20:2298926-2298541 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 85

Conread position: 267-571
Cow position: chr20:40446191-40446506 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 220
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 136, 23

Conread position: 272-627
Cow position: chr20:4892959-4892591 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 244
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 145, 74

Conread position: 276-649
Cow position: chr20:38847368-38846976 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 207

Conread position: 277-555
Cow position: chr20:4332005-4332294 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 208
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 8, 49

Conread position: 277-593
Cow position: chr20:22484727-22485057 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 226
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 5, 70

Conread position: 277-638
Cow position: chr20:7438984-7438617 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 253
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 64, 46

Conread position: 279-652
Cow position: chr20:16941407-16941027 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 250
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 11, 29

Conread position: 280-538
Cow position: chr20:3069208-3068962 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 178
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 61, 0

Conread position: 281-659
Cow position: chr20:17470606-17470972 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 264
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 125, 63

Conread position: 284-407
Cow position: chr20:27003854-27003739 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 284-569
Cow position: chr20:36633692-36633984 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 199
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 125, 59

Conread position: 286-595
Cow position: chr20:8098159-8098486 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 219
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 120, 60

Conread position: 287-640
Cow position: chr20:28594162-28594534 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 261
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 102, 16

Conread position: 288-406
Cow position: chr20:22721900-22722017 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 19, 56

Conread position: 289-387
Cow position: chr20:5633478-5633382 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 87
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 54, 0

Conread position: 289-407
Cow position: chr20:361441-361324 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 57, 0

Conread position: 289-641
Cow position: chr20:5009611-5009975 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 247
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 16, 104

Conread position: 294-640
Cow position: chr20:18379267-18379619 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 244
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 111, 47

Conread position: 294-647
Cow position: chr20:20099708-20099353 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 254
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 108, 18

Conread position: 294-651
Cow position: chr20:28249068-28249436 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 50

Conread position: 294-653
Cow position: chr20:11188920-11188568 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 253
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 38, 208

Conread position: 294-662
Cow position: chr20:11611566-11611945 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 52

Conread position: 305-644
Cow position: chr20:18622478-18622821 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 239
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 104, 8

Conread position: 307-624
Cow position: chr20:10188173-10188501 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 229
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 88, 43

Conread position: 309-640
Cow position: chr20:23358565-23358252 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 221
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 124, 33

Conread position: 312-647
Cow position: chr20:7738323-7737985 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 29

Conread position: 321-555
Cow position: chr20:26077745-26077508 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 169
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 84, 20

Conread position: 321-657
Cow position: chr20:36741388-36741721 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 228
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 89, 20

Conread position: 326-661
Cow position: chr20:11135842-11135489 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 241
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 45, 20

Conread position: 331-661
Cow position: chr20:35192697-35193025 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 231
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 78, 15

Conread position: 336-571
Cow position: chr20:19091195-19090966 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 166
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 77, 10

Conread position: 336-660
Cow position: chr20:4892168-4891856 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 232
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 57, 10

Conread position: 339-662
Cow position: chr20:16548350-16548004 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 239
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 66, 7

Conread position: 341-640
Cow position: chr20:21721164-21721462 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 211
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 214, 52

Conread position: 341-641
Cow position: chr20:21428094-21428401 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 211
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 35, 190

Conread position: 345-640
Cow position: chr20:6248663-6248357 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 215
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 45, 271

Conread position: 345-647
Cow position: chr20:28518239-28517929 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 208
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 64, 19

Conread position: 345-662
Cow position: chr20:11359691-11359375 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 222
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 61, 115

Conread position: 345-662
Cow position: chr20:27477088-27476748 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 228
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 61, 219

Conread position: 346-624
Cow position: chr20:12085491-12085204 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 197
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 59, 133

Conread position: 348-625
Cow position: chr20:354961-354671 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 213
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 53, 115

Conread position: 348-640
Cow position: chr20:38670694-38671008 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 210
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 61, 0

Conread position: 355-652
Cow position: chr20:20892725-20892421 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 202
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 46, 175

Conread position: 371-662
Cow position: chr20:14897710-14898004 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 198
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 42, 0

Conread position: 394-652
Cow position: chr20:24096998-24097249 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 179
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 21, 157

Conread position: 396-579
Cow position: chr20:21815562-21815747 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 133
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 170, 0

Conread position: 398-660
Cow position: chr20:30744718-30744459 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 189
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 158, 0

Conread position: 399-657
Cow position: chr20:37919366-37919117 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 174
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 134, 0

Conread position: 401-653
Cow position: chr20:15529866-15530117 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 185
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 12, 87

Conread position: 402-653
Cow position: chr20:3148689-3148936 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 155

Conread position: 403-624
Cow position: chr20:40818930-40818707 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 152
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 54, 29

Conread position: 403-650
Cow position: chr20:14739812-14739567 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 178
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 5, 98

Conread position: 404-616
Cow position: chr20:39962583-39962791 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 146
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 10, 187

Conread position: 404-647
Cow position: chr20:23850630-23850871 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 168
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 137, 69

Conread position: 404-648
Cow position: chr20:20125023-20124781 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 175
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 70, 0

Conread position: 404-652
Cow position: chr20:35589681-35589429 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 174
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 53, 147

Conread position: 404-656
Cow position: chr20:40157909-40158167 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 172
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 187, 193

Conread position: 404-658
Cow position: chr20:11002404-11002664 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 183
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 38, 155

Conread position: 404-660
Cow position: chr20:11548713-11548466 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 186
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 65, 0

Conread position: 404-660
Cow position: chr20:20926613-20926360 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 184
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 229, 55

Conread position: 404-660
Cow position: chr20:22937303-22937050 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 183
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 229, 55

Conread position: 404-662
Cow position: chr20:25953274-25953531 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 185
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 94, 9

Conread position: 406-573
Cow position: chr20:7709771-7709604 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 120
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 11, 28

Conread position: 406-640
Cow position: chr20:14282931-14283165 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 406-640
Cow position: chr20:33067350-33067117 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 164
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 9, 144

Conread position: 406-649
Cow position: chr20:33623542-33623306 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 172
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 7, 104

Conread position: 406-659
Cow position: chr20:14433412-14433158 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 187
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 8, 129

Conread position: 406-660
Cow position: chr20:1294018-1293766 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 170
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 146, 54

Conread position: 406-661
Cow position: chr20:16818430-16818681 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 170
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 146, 0

Conread position: 406-662
Cow position: chr20:4999101-4998843 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 182
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 95, 0

Conread position: 406-662
Cow position: chr20:38514789-38515052 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 195
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 11, 117

Conread position: 407-616
Cow position: chr20:34849784-34849575 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 137
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 407-640
Cow position: chr20:23590735-23590509 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 164
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 55, 0

Conread position: 407-640
Cow position: chr20:39016863-39016627 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 167
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 10, 0

Conread position: 407-656
Cow position: chr20:31289522-31289760 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 165
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 96, 0

Conread position: 407-659
Cow position: chr20:36239259-36239511 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 172
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 408-652
Cow position: chr20:11751667-11751908 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 176
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 74, 0

Conread position: 410-634
Cow position: chr20:20898575-20898353 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 155
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 150, 0

Conread position: 410-636
Cow position: chr20:28605225-28605444 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 156
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 63, 0

Conread position: 410-639
Cow position: chr20:5703486-5703713 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 167
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 92, 206

Conread position: 410-640
Cow position: chr20:12126289-12126059 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 158
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 410-644
Cow position: chr20:20934717-20934488 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 157
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 143, 0

Conread position: 410-648
Cow position: chr20:10246038-10245813 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 165
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 145, 0

Conread position: 410-648
Cow position: chr20:32583332-32583571 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 162
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 135, 0

Conread position: 410-654
Cow position: chr20:38089928-38090172 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 169
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 410-656
Cow position: chr20:42166764-42166530 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 171
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 227, 66

Conread position: 410-662
Cow position: chr20:23384314-23384560 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 166
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 410-662
Cow position: chr20:24711855-24712104 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 179
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 58, 193

Conread position: 411-611
Cow position: chr20:2743121-2742921 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 143
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 155, 142

Conread position: 411-649
Cow position: chr20:36806537-36806770 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 165
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 136, 152

Conread position: 412-607
Cow position: chr20:32463503-32463317 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 141
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 42, 0

Conread position: 412-640
Cow position: chr20:15766128-15766358 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 161
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 62, 9

Conread position: 412-659
Cow position: chr20:8547085-8547322 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 174
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 99, 77

Conread position: 413-653
Cow position: chr20:35445085-35444847 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 171
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 226, 144

Conread position: 413-655
Cow position: chr20:31148181-31148408 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 166
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 413-657
Cow position: chr20:20158154-20158388 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 178
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 144, 0

Conread position: 413-660
Cow position: chr20:14490269-14490504 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 186
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 8, 0

Conread position: 414-616
Cow position: chr20:18831860-18831662 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 144
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 12, 146

Conread position: 414-640
Cow position: chr20:5364949-5365170 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 164
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 28, 0

Conread position: 414-661
Cow position: chr20:25021447-25021694 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 183
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 127, 90

Conread position: 415-660
Cow position: chr20:3564180-3564415 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 177
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 54, 0

Conread position: 415-662
Cow position: chr20:23548768-23549021 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 178
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 42, 97

Conread position: 422-625
Cow position: chr20:32386983-32387187 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 136
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 7, 0

Conread position: 422-633
Cow position: chr20:39269058-39268847 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 154
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 184, 124

Conread position: 423-640
Cow position: chr20:17370223-17370003 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 160
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 139, 66

Conread position: 427-637
Cow position: chr20:37090655-37090877 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 154
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 32, 5

Conread position: 427-640
Cow position: chr20:7417134-7416918 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 161
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 128, 5

Conread position: 427-650
Cow position: chr20:30755312-30755535 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 156
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 39, 11

Conread position: 428-629
Cow position: chr20:10219672-10219872 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 135
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 83, 0

Conread position: 428-651
Cow position: chr20:21291693-21291922 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 161
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 131, 0

Conread position: 429-660
Cow position: chr20:21941468-21941688 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 157
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 121, 0

Conread position: 432-643
Cow position: chr20:26061068-26060848 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 166
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 25, 186

Conread position: 432-644
Cow position: chr20:19636139-19635932 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 153
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 174, 131

Conread position: 432-656
Cow position: chr20:37609659-37609881 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 158
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 66, 0

Conread position: 432-662
Cow position: chr20:30639746-30639514 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 166
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 121, 0

Conread position: 434-661
Cow position: chr20:26041059-26040838 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 163
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 119, 0

Conread position: 435-654
Cow position: chr20:34349172-34348956 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 156
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 10, 0

Conread position: 436-650
Cow position: chr20:31845244-31845035 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 203, 120

Conread position: 436-657
Cow position: chr20:24883326-24883101 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 163
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 39, 0

Conread position: 436-659
Cow position: chr20:11920689-11920472 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 155
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 53, 0

Conread position: 437-659
Cow position: chr20:20590261-20590046 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 160
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 9, 122

Conread position: 442-625
Cow position: chr20:14607864-14607686 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 114, 0

Conread position: 442-645
Cow position: chr20:35442235-35442034 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 145
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 114, 0

Conread position: 442-651
Cow position: chr20:19201578-19201786 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 162
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 200, 0

Conread position: 442-654
Cow position: chr20:28935593-28935386 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 158
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 11, 49

Conread position: 442-660
Cow position: chr20:23936137-23935915 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 153
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 121, 62

Conread position: 442-661
Cow position: chr20:3035380-3035602 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 157
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 106, 0

Conread position: 442-662
Cow position: chr20:37273045-37273257 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 156
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 103, 0

Conread position: 443-649
Cow position: chr20:19834782-19834581 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 148
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 106, 0

Conread position: 444-635
Cow position: chr20:11499059-11499240 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 143
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 23, 0

Conread position: 444-640
Cow position: chr20:8679613-8679418 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 11, 5

Conread position: 446-629
Cow position: chr20:16291739-16291922 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 139
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 447-639
Cow position: chr20:33076771-33076581 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 145
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 102, 84

Conread position: 447-651
Cow position: chr20:25713404-25713194 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 143
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 447-661
Cow position: chr20:2316373-2316164 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 152
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 143, 110

Conread position: 449-662
Cow position: chr20:8021180-8021402 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 157
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 116, 0

Conread position: 451-650
Cow position: chr20:37242324-37242522 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 141
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 187, 0

Conread position: 452-636
Cow position: chr20:34847963-34848141 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 139
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 108, 0

Conread position: 454-662
Cow position: chr20:26850727-26850519 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 139
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 456-661
Cow position: chr20:37357917-37358122 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 155
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 457-626
Cow position: chr20:38664154-38664321 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 122
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 31, 0

Conread position: 458-636
Cow position: chr20:5078335-5078515 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 97, 137

Conread position: 458-637
Cow position: chr20:17544687-17544866 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 458-654
Cow position: chr20:22851541-22851732 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 141
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 51, 0

Conread position: 458-657
Cow position: chr20:4931149-4931338 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 147
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 34, 0

Conread position: 462-658
Cow position: chr20:24491961-24491767 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 150
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 46, 14

Conread position: 463-611
Cow position: chr20:25474621-25474769 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 99, 68

Conread position: 463-616
Cow position: chr20:34207037-34207190 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 463-623
Cow position: chr20:32146833-32146993 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 112
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 463-626
Cow position: chr20:6848963-6849123 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 84, 0

Conread position: 463-640
Cow position: chr20:19919748-19919576 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 32, 99

Conread position: 463-643
Cow position: chr20:27323334-27323514 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 463-647
Cow position: chr20:15760505-15760317 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 70, 55

Conread position: 463-648
Cow position: chr20:7132694-7132876 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 134
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 78, 0

Conread position: 463-648
Cow position: chr20:9034148-9033966 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 50, 0

Conread position: 463-648
Cow position: chr20:16977776-16977586 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 144
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 84, 0

Conread position: 463-654
Cow position: chr20:20459660-20459848 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 140
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 45, 0

Conread position: 463-656
Cow position: chr20:18763207-18763397 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 141
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 176, 40

Conread position: 463-656
Cow position: chr20:31734132-31734319 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 138
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 71, 23

Conread position: 463-658
Cow position: chr20:7934351-7934538 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 141
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 18, 0

Conread position: 463-661
Cow position: chr20:2798923-2798732 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 84, 0

Conread position: 463-662
Cow position: chr20:23543832-23543634 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 133
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 112, 0

Conread position: 463-662
Cow position: chr20:24026028-24025830 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 133
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 112, 0

Conread position: 463-662
Cow position: chr20:25464977-25464782 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 97, 0

Conread position: 463-662
Cow position: chr20:33359405-33359198 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 149
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 111, 125

Conread position: 465-653
Cow position: chr20:26387531-26387711 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 78, 0

Conread position: 472-662
Cow position: chr20:27315055-27315244 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 152
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 165, 77

Conread position: 473-573
Cow position: chr20:35727852-35727752 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 82
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 473-637
Cow position: chr20:23880029-23879867 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 76, 0

Conread position: 473-647
Cow position: chr20:1824550-1824383 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 136
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 74, 0

Conread position: 473-652
Cow position: chr20:24960015-24960196 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 125
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 166, 0

Conread position: 473-659
Cow position: chr20:4789773-4789599 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 139
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 155, 33

Conread position: 473-661
Cow position: chr20:17840823-17841005 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 143
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 27, 83

Conread position: 473-662
Cow position: chr20:6501965-6502154 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 129
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 473-662
Cow position: chr20:35130409-35130597 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 129
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 474-640
Cow position: chr20:35310404-35310572 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 13, 0

Conread position: 474-641
Cow position: chr20:8245798-8245960 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 121
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 474-651
Cow position: chr20:6370373-6370547 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 79, 35

Conread position: 474-651
Cow position: chr20:31468583-31468407 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 128
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 81, 167

Conread position: 474-655
Cow position: chr20:8409378-8409202 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 137
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 21, 0

Conread position: 474-657
Cow position: chr20:20202298-20202479 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 137
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 86, 0

Conread position: 474-658
Cow position: chr20:29768582-29768778 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 139
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 88, 0

Conread position: 476-651
Cow position: chr20:41313468-41313635 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 139
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 162, 36

Conread position: 479-648
Cow position: chr20:36097604-36097773 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 479-652
Cow position: chr20:297924-297748 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 74, 0

Conread position: 481-613
Cow position: chr20:38414327-38414196 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 100
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 71, 0

Conread position: 481-629
Cow position: chr20:34334960-34334812 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 481-636
Cow position: chr20:5104140-5103985 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 481-636
Cow position: chr20:39229851-39229696 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 112
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 481-640
Cow position: chr20:33462312-33462471 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 481-640
Cow position: chr20:34271413-34271572 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 481-643
Cow position: chr20:39136901-39136740 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 68, 0

Conread position: 481-649
Cow position: chr20:39037342-39037510 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 122
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 152, 107

Conread position: 481-652
Cow position: chr20:15432801-15432631 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 68, 0

Conread position: 481-652
Cow position: chr20:15898185-15898364 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 28, 146

Conread position: 481-653
Cow position: chr20:21344553-21344725 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 481-654
Cow position: chr20:23428456-23428296 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 481-659
Cow position: chr20:600392-600560 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 127
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 481-660
Cow position: chr20:23966844-23967022 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 157, 14

Conread position: 481-660
Cow position: chr20:35827439-35827609 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 128
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 66, 0

Conread position: 481-662
Cow position: chr20:21018510-21018688 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 157, 63

Conread position: 481-662
Cow position: chr20:40442381-40442200 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 131
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 69, 158

Conread position: 482-644
Cow position: chr20:17606880-17606718 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 127
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 482-650
Cow position: chr20:38061679-38061521 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 76, 0

Conread position: 482-657
Cow position: chr20:26596234-26596409 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 121
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 483-653
Cow position: chr20:14755752-14755588 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 137
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 64, 0

Conread position: 483-657
Cow position: chr20:10715272-10715442 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 156, 25

Conread position: 486-628
Cow position: chr20:12033531-12033396 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 486-640
Cow position: chr20:34881306-34881161 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 61, 0

Conread position: 486-649
Cow position: chr20:23506026-23506185 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 67, 78

Conread position: 486-655
Cow position: chr20:26424497-26424664 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 130
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 73, 0

Conread position: 486-658
Cow position: chr20:17733468-17733299 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 137
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 149, 0

Conread position: 486-661
Cow position: chr20:13994905-13995073 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 89, 0

Conread position: 486-662
Cow position: chr20:18500618-18500794 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 136
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 487-660
Cow position: chr20:30028026-30027855 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 126
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 66, 118

Conread position: 487-662
Cow position: chr20:5172704-5172874 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 150, 74

Conread position: 488-660
Cow position: chr20:6473826-6473997 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 140
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 52, 0

Conread position: 488-661
Cow position: chr20:17524365-17524539 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 135
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 153, 0

Conread position: 489-654
Cow position: chr20:35605301-35605459 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 68, 0

Conread position: 489-661
Cow position: chr20:11661229-11661065 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 68, 0

Conread position: 492-648
Cow position: chr20:14460478-14460634 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 494-640
Cow position: chr20:42897878-42897730 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 108
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 83, 0

Conread position: 494-657
Cow position: chr20:5268744-5268581 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 118
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 494-658
Cow position: chr20:21169663-21169510 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 128
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 55, 0

Conread position: 496-653
Cow position: chr20:11368261-11368109 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 498-649
Cow position: chr20:27208299-27208147 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 92, 51

Conread position: 500-626
Cow position: chr20:34410601-34410476 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 98
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 58, 46

Conread position: 501-661
Cow position: chr20:41704261-41704424 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 57, 145

Conread position: 502-660
Cow position: chr20:17755305-17755154 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 7, 48

Conread position: 503-662
Cow position: chr20:41323256-41323098 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 108, 0

Conread position: 504-659
Cow position: chr20:36135470-36135623 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 51, 0

Conread position: 507-660
Cow position: chr20:19623132-19622984 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 37, 57

Conread position: 508-657
Cow position: chr20:10486245-10486099 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 41, 0

Conread position: 511-662
Cow position: chr20:684742-684591 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 108
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 514-651
Cow position: chr20:34918524-34918661 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 515-640
Cow position: chr20:11909567-11909443 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 107, 0

Conread position: 516-659
Cow position: chr20:33557514-33557656 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 98, 0

Conread position: 516-662
Cow position: chr20:34397316-34397170 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 517-635
Cow position: chr20:2070010-2069894 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 519-636
Cow position: chr20:26055103-26054986 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 524-653
Cow position: chr20:6363075-6362945 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 114, 73

Conread position: 526-635
Cow position: chr20:6048435-6048327 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 91
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 23, 0

Conread position: 526-662
Cow position: chr20:31059730-31059865 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 102
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 79, 0

Conread position: 532-662
Cow position: chr20:26562080-26561950 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 98
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 534-640
Cow position: chr20:6765110-6765213 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 536-659
Cow position: chr20:31311670-31311793 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 94
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 537-662
Cow position: chr20:2827919-2828040 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 82, 20

Conread position: 538-658
Cow position: chr20:13490249-13490134 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 539-652
Cow position: chr20:18400078-18400191 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 548-657
Cow position: chr20:36365969-36366077 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 94, 0

Conread position: 553-655
Cow position: chr20:25351271-25351170 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 89, 0

Conread position: 561-662
Cow position: chr20:1009267-1009167 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 86
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 54, 0

Show alignments to all cow chromosomes.