Cow genome map

Conread name: mCP0-MI-P-CP0-nvh-f-02-0-UI.s1

Conread position: 226-500
Cow position: chr11:30764411-30764686 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 184
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 72, 27

Conread position: 245-498
Cow position: chr11:83397845-83398099 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 170
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 153, 23

Conread position: 252-519
Cow position: chr11:17676432-17676163 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 181
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 15, 149

Conread position: 253-508
Cow position: chr11:45619296-45619551 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 169
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 38, 150

Conread position: 254-519
Cow position: chr11:36297735-36297465 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 175
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 128, 8

Conread position: 256-487
Cow position: chr11:75090270-75090039 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 159
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 11, 17

Conread position: 256-490
Cow position: chr11:20238623-20238859 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 157
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 43, 0

Conread position: 256-511
Cow position: chr11:62620323-62620580 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 175
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 32, 0

Conread position: 258-511
Cow position: chr11:953307-953563 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 170
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 37, 41

Conread position: 259-509
Cow position: chr11:32710465-32710716 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 175
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 12, 225

Conread position: 260-513
Cow position: chr11:4323311-4323572 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 173
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 122, 164

Conread position: 262-498
Cow position: chr11:30721053-30721293 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 158
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 120, 0

Conread position: 262-501
Cow position: chr11:19119028-19118788 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 159
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 140, 79

Conread position: 262-502
Cow position: chr11:66326155-66325912 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 161
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 134, 0

Conread position: 262-520
Cow position: chr11:59862162-59862424 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 172
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 136, 0

Conread position: 271-508
Cow position: chr11:7460651-7460429 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 163
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 138, 0

Conread position: 271-521
Cow position: chr11:18425277-18425025 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 163
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 129, 0

Conread position: 276-508
Cow position: chr11:21124638-21124407 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 162
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 122, 38

Conread position: 277-520
Cow position: chr11:1952546-1952792 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 163
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 13, 0

Conread position: 278-495
Cow position: chr11:47311013-47310796 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 151
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 120, 40

Conread position: 282-507
Cow position: chr11:55399177-55398948 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 155
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 109, 0

Conread position: 282-519
Cow position: chr11:3118950-3119187 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 158
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 100, 114

Conread position: 286-478
Cow position: chr11:36981542-36981736 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 134
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 96, 161

Conread position: 286-485
Cow position: chr11:78544262-78544463 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 137
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 96, 0

Conread position: 286-498
Cow position: chr11:7458303-7458089 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 143
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 116, 0

Conread position: 286-503
Cow position: chr11:22874447-22874666 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 146
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 87, 0

Conread position: 286-506
Cow position: chr11:1067461-1067239 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 153
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 88, 197

Conread position: 286-508
Cow position: chr11:55636247-55636022 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 154
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 96, 73

Conread position: 286-509
Cow position: chr11:35665584-35665357 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 156
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 89, 103

Conread position: 286-509
Cow position: chr11:51846276-51846499 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 155
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 33, 39

Conread position: 286-510
Cow position: chr11:33001943-33002170 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 152
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 96, 0

Conread position: 286-511
Cow position: chr11:31024828-31024597 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 161
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 96, 0

Conread position: 286-511
Cow position: chr11:34968635-34968409 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 161
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 114, 66

Conread position: 286-512
Cow position: chr11:14649335-14649105 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 155
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 68, 0

Conread position: 286-512
Cow position: chr11:36940617-36940389 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 157
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 96, 0

Conread position: 286-514
Cow position: chr11:35562698-35562927 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 159
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 96, 198

Conread position: 286-515
Cow position: chr11:40794373-40794140 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 155
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 101, 214

Conread position: 286-517
Cow position: chr11:66289530-66289763 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 150
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 96, 0

Conread position: 286-519
Cow position: chr11:32254238-32254004 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 159
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 111, 0

Conread position: 286-520
Cow position: chr11:6642792-6643028 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 162
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 96, 40

Conread position: 286-520
Cow position: chr11:7315170-7314934 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 161
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 96, 119

Conread position: 286-521
Cow position: chr11:3219944-3220176 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 156
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 176, 116

Conread position: 286-521
Cow position: chr11:68555116-68554878 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 162
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 96, 180

Conread position: 290-493
Cow position: chr11:68913123-68913329 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 146
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 108, 0

Conread position: 290-521
Cow position: chr11:71854296-71854068 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 159
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 110, 74

Conread position: 291-509
Cow position: chr11:62204637-62204856 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 146
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 105, 0

Conread position: 291-513
Cow position: chr11:23297644-23297868 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 150
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 48, 0

Conread position: 292-513
Cow position: chr11:41980220-41979997 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 158
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 27, 13

Conread position: 292-516
Cow position: chr11:70382707-70382480 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 153
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 25, 0

Conread position: 293-510
Cow position: chr11:62239730-62239944 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 147
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 104, 0

Conread position: 294-517
Cow position: chr11:27972437-27972213 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 152
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 88, 20

Conread position: 296-498
Cow position: chr11:30165498-30165702 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 144
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 120, 0

Conread position: 296-517
Cow position: chr11:80893771-80893992 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 155
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 104, 11

Conread position: 297-488
Cow position: chr11:29786509-29786312 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 136
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 101, 0

Conread position: 297-490
Cow position: chr11:41215722-41215916 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 139
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 101, 152

Conread position: 297-490
Cow position: chr11:53778606-53778803 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 139
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 127, 0

Conread position: 297-493
Cow position: chr11:86895366-86895558 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 137
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 104, 0

Conread position: 297-494
Cow position: chr11:78381071-78380882 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 21, 0

Conread position: 297-495
Cow position: chr11:5416874-5417074 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 137
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 85, 0

Conread position: 297-498
Cow position: chr11:25783702-25783907 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 146
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 101, 0

Conread position: 297-498
Cow position: chr11:36520864-36521071 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 148
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 44, 0

Conread position: 297-498
Cow position: chr11:53510510-53510304 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 147
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 106, 17

Conread position: 297-498
Cow position: chr11:60296720-60296929 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 152
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 22, 30

Conread position: 297-501
Cow position: chr11:35182999-35182793 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 141
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 85, 0

Conread position: 297-501
Cow position: chr11:37804564-37804358 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 145
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 106, 0

Conread position: 297-501
Cow position: chr11:41438197-41437993 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 144
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 86, 197

Conread position: 297-501
Cow position: chr11:81138201-81138406 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 140
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 103, 51

Conread position: 297-507
Cow position: chr11:32595447-32595660 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 143
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 99, 0

Conread position: 297-508
Cow position: chr11:63975119-63975335 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 153
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 85, 0

Conread position: 297-508
Cow position: chr11:85571816-85571605 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 150
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 52, 57

Conread position: 297-509
Cow position: chr11:15366983-15366777 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 145
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 103, 0

Conread position: 297-511
Cow position: chr11:29308570-29308783 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 151
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 105, 197

Conread position: 297-513
Cow position: chr11:6857718-6857936 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 152
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 85, 187

Conread position: 297-513
Cow position: chr11:30893710-30893490 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 148
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 85, 0

Conread position: 297-513
Cow position: chr11:58594398-58594180 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 148
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 104, 0

Conread position: 297-514
Cow position: chr11:8496022-8496240 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 151
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 77, 0

Conread position: 297-514
Cow position: chr11:34616248-34616468 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 153
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 35, 0

Conread position: 297-514
Cow position: chr11:59024370-59024146 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 156
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 99, 50

Conread position: 297-515
Cow position: chr11:55744457-55744677 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 152
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 106, 0

Conread position: 297-516
Cow position: chr11:2788383-2788602 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 154
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 103, 197

Conread position: 297-516
Cow position: chr11:3720245-3720464 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 151
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 85, 26

Conread position: 297-516
Cow position: chr11:16314862-16315083 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 165
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 86, 0

Conread position: 297-516
Cow position: chr11:49625927-49625707 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 145
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 89, 49

Conread position: 297-517
Cow position: chr11:21830220-21830001 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 149
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 124, 0

Conread position: 297-517
Cow position: chr11:35444034-35444255 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 151
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 105, 0

Conread position: 297-517
Cow position: chr11:42016649-42016431 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 154
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 103, 27

Conread position: 297-518
Cow position: chr11:15369377-15369602 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 158
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 101, 0

Conread position: 297-518
Cow position: chr11:31417411-31417635 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 148
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 85, 0

Conread position: 297-519
Cow position: chr11:42919235-42919004 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 159
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 73, 0

Conread position: 297-519
Cow position: chr11:46884363-46884591 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 169
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 106, 0

Conread position: 297-519
Cow position: chr11:66733819-66734044 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 151
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 85, 187

Conread position: 297-521
Cow position: chr11:15504102-15504323 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 150
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 67, 0

Conread position: 297-521
Cow position: chr11:37752441-37752213 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 155
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 40, 0

Conread position: 297-521
Cow position: chr11:87172087-87171862 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 158
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 101, 130

Conread position: 298-476
Cow position: chr11:35926914-35926740 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 107, 16

Conread position: 298-484
Cow position: chr11:8461995-8462183 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 130
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 108, 0

Conread position: 298-484
Cow position: chr11:45872320-45872132 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 132
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 104, 0

Conread position: 298-490
Cow position: chr11:35580251-35580444 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 132
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 129, 109

Conread position: 298-506
Cow position: chr11:49396535-49396326 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 145
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 189, 0

Conread position: 298-514
Cow position: chr11:64781077-64781295 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 151
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 99, 0

Conread position: 298-516
Cow position: chr11:55052862-55053071 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 149
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 99, 0

Conread position: 298-517
Cow position: chr11:85723187-85723409 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 147
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 84, 0

Conread position: 298-519
Cow position: chr11:5075237-5075018 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 153
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 104, 92

Conread position: 298-519
Cow position: chr11:45350521-45350298 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 158
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 105, 0

Conread position: 298-521
Cow position: chr11:41123610-41123383 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 155
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 48, 0

Conread position: 299-456
Cow position: chr11:71868611-71868454 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 116
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 97, 128

Conread position: 299-490
Cow position: chr11:35352049-35351850 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 140
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 99, 0

Conread position: 299-498
Cow position: chr11:26144104-26143907 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 143
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 97, 164

Conread position: 299-498
Cow position: chr11:50472308-50472509 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 143
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 16, 26

Conread position: 299-512
Cow position: chr11:52132830-52132615 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 148
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 93, 73

Conread position: 299-518
Cow position: chr11:13500007-13500221 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 153
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 102, 0

Conread position: 299-518
Cow position: chr11:48672704-48672925 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 156
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 84, 0

Conread position: 299-519
Cow position: chr11:30708498-30708717 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 163
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 86, 60

Conread position: 299-521
Cow position: chr11:77017233-77017445 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 156
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 20, 28

Conread position: 301-509
Cow position: chr11:19579022-19578820 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 147
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 74, 0

Conread position: 305-495
Cow position: chr11:6352806-6352996 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 134
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 92, 41

Conread position: 306-498
Cow position: chr11:67614923-67614734 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 137
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 91, 0

Conread position: 307-490
Cow position: chr11:18924745-18924930 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 132
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 102, 0

Conread position: 307-519
Cow position: chr11:5231647-5231432 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 148
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 12, 41

Conread position: 308-486
Cow position: chr11:17721801-17721622 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 124
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 101, 0

Conread position: 308-490
Cow position: chr11:20205851-20205675 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 131
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 68, 80

Conread position: 308-490
Cow position: chr11:50152813-50152630 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 132
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 104, 89

Conread position: 308-490
Cow position: chr11:52380871-52380689 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 126
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 68, 80

Conread position: 308-490
Cow position: chr11:63999091-63998907 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 90, 0

Conread position: 308-493
Cow position: chr11:36917776-36917579 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 140
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 83, 0

Conread position: 308-497
Cow position: chr11:15382502-15382306 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 139
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 90, 192

Conread position: 308-497
Cow position: chr11:80370115-80370303 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 139
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 90, 25

Conread position: 308-497
Cow position: chr11:83043362-83043177 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 132
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 89, 0

Conread position: 308-498
Cow position: chr11:46922885-46922696 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 135
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 68, 81

Conread position: 308-500
Cow position: chr11:3714821-3715015 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 142
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 11, 17

Conread position: 308-500
Cow position: chr11:17638534-17638325 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 151
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 6, 17

Conread position: 308-500
Cow position: chr11:36092916-36092726 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 140
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 32, 94

Conread position: 308-500
Cow position: chr11:52297220-52297027 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 137
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 179, 102

Conread position: 308-501
Cow position: chr11:6423398-6423204 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 134
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 101, 89

Conread position: 308-501
Cow position: chr11:41986045-41985854 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 135
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 93, 0

Conread position: 308-501
Cow position: chr11:45277148-45276954 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 136
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 94, 23

Conread position: 308-511
Cow position: chr11:15772711-15772510 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 156
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 90, 10

Conread position: 308-515
Cow position: chr11:35804909-35805118 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 140
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 74, 0

Conread position: 308-515
Cow position: chr11:57767191-57767397 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 143
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 11, 17

Conread position: 309-486
Cow position: chr11:49149050-49149225 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 126
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 30, 104

Conread position: 309-497
Cow position: chr11:40608592-40608404 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 140
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 86, 25

Conread position: 309-519
Cow position: chr11:1625222-1625007 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 147
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 91, 72

Conread position: 310-511
Cow position: chr11:44032014-44032208 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 144
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 87, 0

Conread position: 311-490
Cow position: chr11:34778440-34778260 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 127
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 87, 172

Conread position: 311-510
Cow position: chr11:25119928-25119734 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 137
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 76, 0

Conread position: 314-510
Cow position: chr11:7250098-7250297 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 136
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 126, 0

Conread position: 319-506
Cow position: chr11:27248502-27248687 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 129
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 78, 0

Conread position: 321-514
Cow position: chr11:76896361-76896166 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 84, 0

Conread position: 323-513
Cow position: chr11:35805674-35805866 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 132
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 323-518
Cow position: chr11:41278201-41278401 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 148
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 75, 0

Conread position: 323-520
Cow position: chr11:2084159-2084359 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 149
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 80, 0

Conread position: 324-475
Cow position: chr11:35960965-35960813 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 112
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 78, 0

Conread position: 324-479
Cow position: chr11:21173421-21173265 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 72, 102

Conread position: 324-479
Cow position: chr11:26343118-26343274 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 80, 0

Conread position: 324-482
Cow position: chr11:13043129-13042973 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 77, 0

Conread position: 324-486
Cow position: chr11:30638933-30638773 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 117
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 77, 0

Conread position: 324-493
Cow position: chr11:3739970-3740150 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 72, 0

Conread position: 324-497
Cow position: chr11:44619971-44620143 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 72, 140

Conread position: 324-498
Cow position: chr11:19148120-19147951 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 125
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 324-507
Cow position: chr11:35733067-35732883 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 132
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 74, 91

Conread position: 324-507
Cow position: chr11:37435971-37435786 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 134
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 72, 90

Conread position: 324-510
Cow position: chr11:36058813-36059001 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 58, 79

Conread position: 324-511
Cow position: chr11:41239174-41238987 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 130
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 74, 137

Conread position: 324-516
Cow position: chr11:12555289-12555096 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 148
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 74, 170

Conread position: 324-520
Cow position: chr11:7652050-7651857 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 139
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 74, 145

Conread position: 324-520
Cow position: chr11:32800642-32800840 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 79, 0

Conread position: 324-520
Cow position: chr11:39462640-39462831 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 143
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 77, 0

Conread position: 324-521
Cow position: chr11:9528012-9527812 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 135
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 74, 0

Conread position: 325-479
Cow position: chr11:60720438-60720282 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 73, 0

Conread position: 325-481
Cow position: chr11:35109521-35109366 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 15, 48

Conread position: 325-489
Cow position: chr11:63407713-63407876 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 73, 19

Conread position: 325-490
Cow position: chr11:6233862-6233695 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 81, 0

Conread position: 325-490
Cow position: chr11:54872742-54872577 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 44, 27

Conread position: 325-491
Cow position: chr11:30830596-30830439 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 129
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 72, 0

Conread position: 325-496
Cow position: chr11:69417419-69417592 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 73, 0

Conread position: 325-497
Cow position: chr11:34747524-34747698 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 125
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 57, 0

Conread position: 325-497
Cow position: chr11:48659952-48660120 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 123
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 76, 0

Conread position: 325-498
Cow position: chr11:15591457-15591289 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 65, 61

Conread position: 325-498
Cow position: chr11:19549498-19549667 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 27, 0

Conread position: 325-498
Cow position: chr11:27746941-27747109 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 126
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 71, 0

Conread position: 325-498
Cow position: chr11:74152737-74152557 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 128
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 325-498
Cow position: chr11:74839628-74839793 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 76, 0

Conread position: 325-498
Cow position: chr11:77241722-77241893 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 78, 0

Conread position: 325-500
Cow position: chr11:33369168-33369344 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 136
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 72, 165

Conread position: 325-501
Cow position: chr11:7385457-7385629 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 127
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 164, 49

Conread position: 325-501
Cow position: chr11:62789148-62789324 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 166, 78

Conread position: 325-507
Cow position: chr11:23407482-23407662 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 130
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 167, 76

Conread position: 325-507
Cow position: chr11:57724807-57724622 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 127
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 325-508
Cow position: chr11:62889876-62889691 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 138
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 78, 173

Conread position: 325-509
Cow position: chr11:30894986-30894800 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 130
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 59, 87

Conread position: 325-509
Cow position: chr11:63484955-63485132 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 75, 0

Conread position: 325-509
Cow position: chr11:66099845-66099655 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 131
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 325-510
Cow position: chr11:63475655-63475472 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 142
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 72, 164

Conread position: 325-511
Cow position: chr11:42206439-42206618 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 135
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 75, 0

Conread position: 325-512
Cow position: chr11:66041296-66041477 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 134
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 76, 0

Conread position: 325-513
Cow position: chr11:18851926-18852104 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 325-513
Cow position: chr11:26057633-26057441 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 139
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 78, 0

Conread position: 325-513
Cow position: chr11:40818609-40818427 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 131
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 72, 0

Conread position: 325-513
Cow position: chr11:81143524-81143338 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 135
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 28, 82

Conread position: 325-514
Cow position: chr11:42066882-42067069 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 133
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 167, 0

Conread position: 325-515
Cow position: chr11:1932474-1932280 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 138
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 36, 0

Conread position: 325-518
Cow position: chr11:39060584-39060397 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 135
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 325-519
Cow position: chr11:18777581-18777378 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 146
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 83, 8

Conread position: 325-519
Cow position: chr11:30370122-30370320 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 143
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 144, 72

Conread position: 325-520
Cow position: chr11:70206338-70206530 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 137
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 162, 26

Conread position: 325-521
Cow position: chr11:4621413-4621226 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 141
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 76, 0

Conread position: 325-521
Cow position: chr11:17517416-17517613 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 73, 141

Conread position: 325-521
Cow position: chr11:18509013-18508816 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 147
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 78, 170

Conread position: 326-478
Cow position: chr11:2835877-2836031 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 72, 0

Conread position: 326-490
Cow position: chr11:27907795-27907953 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 326-493
Cow position: chr11:29677225-29677393 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 122
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 80, 0

Conread position: 326-493
Cow position: chr11:30322474-30322308 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 110, 0

Conread position: 326-493
Cow position: chr11:53816871-53817041 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 122
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 72, 0

Conread position: 326-494
Cow position: chr11:56114959-56115124 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 124
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 130, 75

Conread position: 326-495
Cow position: chr11:26442486-26442315 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 72, 0

Conread position: 326-496
Cow position: chr11:49872869-49872698 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 122
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 72, 0

Conread position: 326-497
Cow position: chr11:13864086-13863910 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 53, 0

Conread position: 326-497
Cow position: chr11:13940204-13940377 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 72, 113

Conread position: 326-497
Cow position: chr11:21885852-21886020 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 69, 22

Conread position: 326-497
Cow position: chr11:72870922-72871087 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 59, 84

Conread position: 326-498
Cow position: chr11:70600810-70600636 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 77, 0

Conread position: 326-500
Cow position: chr11:6245333-6245514 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 72, 0

Conread position: 326-500
Cow position: chr11:47784793-47784973 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 129
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 326-506
Cow position: chr11:79548919-79548732 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 133
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 72, 0

Conread position: 326-508
Cow position: chr11:34644673-34644860 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 37, 0

Conread position: 326-509
Cow position: chr11:5176358-5176178 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 163, 75

Conread position: 326-510
Cow position: chr11:25968835-25968650 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 140
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 77, 20

Conread position: 326-511
Cow position: chr11:47411859-47412047 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 137
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 24, 28

Conread position: 326-511
Cow position: chr11:49210803-49210612 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 134
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 326-512
Cow position: chr11:64334854-64335035 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 131
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 17, 83

Conread position: 326-512
Cow position: chr11:83028012-83028200 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 143
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 72, 119

Conread position: 326-513
Cow position: chr11:62742627-62742441 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 164, 71

Conread position: 326-513
Cow position: chr11:68570362-68570175 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 74, 114

Conread position: 326-515
Cow position: chr11:3728503-3728694 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 133
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 56, 0

Conread position: 326-515
Cow position: chr11:42084657-42084463 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 140
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 72, 0

Conread position: 326-515
Cow position: chr11:81175615-81175803 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 137
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 26, 168

Conread position: 326-520
Cow position: chr11:21590404-21590603 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 146
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 83, 0

Conread position: 326-521
Cow position: chr11:6320114-6319916 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 77, 0

Conread position: 327-513
Cow position: chr11:48296050-48296227 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 135
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 74, 0

Conread position: 327-516
Cow position: chr11:36182714-36182900 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 136
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 49, 61

Conread position: 327-521
Cow position: chr11:38226262-38226458 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 140
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 64, 0

Conread position: 328-490
Cow position: chr11:38223767-38223610 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 328-495
Cow position: chr11:71303599-71303767 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 328-497
Cow position: chr11:63849931-63849760 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 75, 0

Conread position: 328-509
Cow position: chr11:80556241-80556423 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 130
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 160, 6

Conread position: 331-486
Cow position: chr11:43641410-43641567 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 67, 0

Conread position: 331-487
Cow position: chr11:19247176-19247025 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 67, 0

Conread position: 331-493
Cow position: chr11:13592759-13592925 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 67, 0

Conread position: 331-511
Cow position: chr11:17889707-17889523 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 128
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 331-511
Cow position: chr11:62606440-62606625 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 131
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 84, 0

Conread position: 331-516
Cow position: chr11:44176619-44176800 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 74, 117

Conread position: 331-518
Cow position: chr11:46314034-46314221 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 133
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 67, 164

Conread position: 331-519
Cow position: chr11:77013804-77013983 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 166, 56

Conread position: 331-521
Cow position: chr11:76248073-76248264 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 139
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 67, 55

Conread position: 332-500
Cow position: chr11:38334548-38334714 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 123
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 66, 0

Conread position: 332-515
Cow position: chr11:62102423-62102240 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 71, 170

Conread position: 333-486
Cow position: chr11:68326838-68326683 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 65, 0

Conread position: 333-493
Cow position: chr11:5486039-5486202 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 64, 97

Conread position: 333-493
Cow position: chr11:5559307-5559469 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 118
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 65, 0

Conread position: 333-495
Cow position: chr11:7874164-7874329 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 119
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 65, 0

Conread position: 333-495
Cow position: chr11:37100147-37099985 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 128
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 67, 160

Conread position: 333-495
Cow position: chr11:42884760-42884597 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 65, 8

Conread position: 333-498
Cow position: chr11:25603973-25604145 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 76, 62

Conread position: 333-498
Cow position: chr11:25620365-25620199 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 121
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 65, 87

Conread position: 333-510
Cow position: chr11:5961331-5961510 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 124
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 65, 0

Conread position: 333-513
Cow position: chr11:36361617-36361434 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 133
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 65, 0

Conread position: 333-515
Cow position: chr11:664367-664185 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 131
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 49, 92

Conread position: 333-517
Cow position: chr11:2874423-2874612 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 131
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 65, 0

Conread position: 333-517
Cow position: chr11:5328811-5328993 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 61, 31

Conread position: 333-519
Cow position: chr11:4363888-4363703 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 136
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 70, 77

Conread position: 333-521
Cow position: chr11:12079862-12080058 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 137
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 65, 0

Conread position: 334-490
Cow position: chr11:63695819-63695655 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 334-495
Cow position: chr11:75285733-75285568 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 64, 0

Conread position: 334-520
Cow position: chr11:23220389-23220573 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 135
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 67, 0

Conread position: 335-497
Cow position: chr11:41213076-41213242 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 335-498
Cow position: chr11:35544112-35544277 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 335-510
Cow position: chr11:66939565-66939387 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 63, 0

Conread position: 337-515
Cow position: chr11:65436250-65436427 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 130
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 61, 111

Conread position: 337-521
Cow position: chr11:65431548-65431731 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 132
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 39, 51

Conread position: 338-490
Cow position: chr11:30986669-30986819 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 65, 0

Conread position: 338-497
Cow position: chr11:17369561-17369715 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 124
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 61, 0

Conread position: 338-498
Cow position: chr11:51683246-51683408 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 60, 0

Conread position: 338-501
Cow position: chr11:30688506-30688341 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 116
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 338-503
Cow position: chr11:7500779-7500948 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 60, 110

Conread position: 338-516
Cow position: chr11:30874311-30874491 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 124
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 339-501
Cow position: chr11:67931461-67931297 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 116
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 341-488
Cow position: chr11:12742457-12742313 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 69, 0

Conread position: 341-514
Cow position: chr11:70821078-70821249 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 125
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 35, 44

Conread position: 341-519
Cow position: chr11:18119537-18119719 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 57, 17

Conread position: 343-521
Cow position: chr11:68592052-68592234 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 6, 0

Conread position: 344-490
Cow position: chr11:32817780-32817633 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 107
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 344-496
Cow position: chr11:63491054-63491208 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 113
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 65, 0

Conread position: 344-500
Cow position: chr11:28078530-28078682 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 57, 0

Conread position: 344-508
Cow position: chr11:1265507-1265343 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 54, 109

Conread position: 344-511
Cow position: chr11:24551427-24551595 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 123
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 45, 14

Conread position: 344-514
Cow position: chr11:33271467-33271637 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 148, 57

Conread position: 345-495
Cow position: chr11:41134042-41133892 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 110
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 346-498
Cow position: chr11:26823148-26823303 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 113
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 346-500
Cow position: chr11:10992305-10992451 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 346-520
Cow position: chr11:35922159-35921981 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 125
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 347-501
Cow position: chr11:4389941-4390098 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 114
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 349-520
Cow position: chr11:23279116-23278941 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 49, 148

Conread position: 352-517
Cow position: chr11:6784253-6784417 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 121
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 141, 27

Conread position: 390-519
Cow position: chr11:59744079-59744211 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 96, 0

Show alignments to all cow chromosomes.