Cow genome map
| Conread name: | mCP0-MI-P-CP0-nvh-f-02-0-UI.s1 |
| Conread position: | 241-521 |
| Cow position: | chr29:1933621-1933341 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 191 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 54, 8 |
| Conread position: | 246-488 |
| Cow position: | chr29:34745705-34745465 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 31, 14 |
| Conread position: | 254-511 |
| Cow position: | chr29:32799748-32799486 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 144, 21 |
| Conread position: | 256-518 |
| Cow position: | chr29:20527199-20526936 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 126, 83 |
| Conread position: | 257-517 |
| Cow position: | chr29:28204230-28204487 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 130, 14 |
| Conread position: | 258-517 |
| Cow position: | chr29:25814870-25814610 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 178 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 124, 75 |
| Conread position: | 259-515 |
| Cow position: | chr29:34297601-34297347 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 244, 142 |
| Conread position: | 271-460 |
| Cow position: | chr29:29795403-29795212 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 271-497 |
| Cow position: | chr29:28420734-28420963 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 13, 58 |
| Conread position: | 275-520 |
| Cow position: | chr29:32713144-32713392 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 280-520 |
| Cow position: | chr29:8629111-8628869 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 283-509 |
| Cow position: | chr29:28674718-28674485 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 283-518 |
| Cow position: | chr29:21933130-21932894 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 115, 157 |
| Conread position: | 286-467 |
| Cow position: | chr29:29974020-29973838 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 119, 9 |
| Conread position: | 286-471 |
| Cow position: | chr29:23876840-23876653 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 286-498 |
| Cow position: | chr29:16290720-16290929 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 103, 116 |
| Conread position: | 286-506 |
| Cow position: | chr29:32656427-32656650 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 286-514 |
| Cow position: | chr29:28478321-28478554 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 95, 110 |
| Conread position: | 286-516 |
| Cow position: | chr29:23577794-23577560 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 91, 172 |
| Conread position: | 286-521 |
| Cow position: | chr29:27524841-27524605 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 96, 188 |
| Conread position: | 287-516 |
| Cow position: | chr29:30089060-30088831 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 95, 54 |
| Conread position: | 289-497 |
| Cow position: | chr29:1614926-1615132 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 95, 99 |
| Conread position: | 290-482 |
| Cow position: | chr29:21443340-21443151 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 106, 169 |
| Conread position: | 290-501 |
| Cow position: | chr29:2744269-2744060 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 116, 84 |
| Conread position: | 290-507 |
| Cow position: | chr29:19363709-19363925 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 198, 44 |
| Conread position: | 290-514 |
| Cow position: | chr29:20087382-20087157 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 92, 36 |
| Conread position: | 294-514 |
| Cow position: | chr29:30021121-30021343 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 296-512 |
| Cow position: | chr29:25874467-25874249 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 296-521 |
| Cow position: | chr29:8163825-8163599 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 162 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 107, 194 |
| Conread position: | 297-460 |
| Cow position: | chr29:24051376-24051210 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 101, 55 |
| Conread position: | 297-480 |
| Cow position: | chr29:4423434-4423262 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 297-489 |
| Cow position: | chr29:17222418-17222613 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 88, 147 |
| Conread position: | 297-490 |
| Cow position: | chr29:501202-501398 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 101, 152 |
| Conread position: | 297-490 |
| Cow position: | chr29:17297141-17297336 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 297-490 |
| Cow position: | chr29:19420608-19420422 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 297-490 |
| Cow position: | chr29:20167429-20167621 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 101, 160 |
| Conread position: | 297-493 |
| Cow position: | chr29:24188060-24187862 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 297-493 |
| Cow position: | chr29:24292873-24293071 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 84, 149 |
| Conread position: | 297-498 |
| Cow position: | chr29:38754934-38754732 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 42, 108 |
| Conread position: | 297-500 |
| Cow position: | chr29:33321356-33321557 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 108, 8 |
| Conread position: | 297-500 |
| Cow position: | chr29:35292097-35292294 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 35, 101 |
| Conread position: | 297-508 |
| Cow position: | chr29:8979569-8979356 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 137, 0 |
| Conread position: | 297-508 |
| Cow position: | chr29:18450133-18449925 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 18, 28 |
| Conread position: | 297-509 |
| Cow position: | chr29:465394-465177 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 85, 137 |
| Conread position: | 297-509 |
| Cow position: | chr29:23844843-23845057 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 297-509 |
| Cow position: | chr29:23951576-23951358 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 297-509 |
| Cow position: | chr29:44684104-44684314 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 297-510 |
| Cow position: | chr29:14576864-14577072 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 297-511 |
| Cow position: | chr29:14501598-14501814 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 144 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 297-512 |
| Cow position: | chr29:31489324-31489547 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 22, 37 |
| Conread position: | 297-515 |
| Cow position: | chr29:5831015-5830794 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 297-516 |
| Cow position: | chr29:18878476-18878256 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 101, 167 |
| Conread position: | 297-517 |
| Cow position: | chr29:16272747-16272969 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 297-521 |
| Cow position: | chr29:5046658-5046883 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 101, 168 |
| Conread position: | 297-521 |
| Cow position: | chr29:36586572-36586798 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 41, 46 |
| Conread position: | 297-521 |
| Cow position: | chr29:37618310-37618537 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 162 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 298-486 |
| Cow position: | chr29:26539241-26539425 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 298-490 |
| Cow position: | chr29:22613436-22613619 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 298-490 |
| Cow position: | chr29:32656086-32655896 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 48, 107 |
| Conread position: | 298-512 |
| Cow position: | chr29:36249043-36249258 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 298-513 |
| Cow position: | chr29:14375875-14375658 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 298-521 |
| Cow position: | chr29:32894269-32894486 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 299-515 |
| Cow position: | chr29:4648202-4647985 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 193, 99 |
| Conread position: | 300-508 |
| Cow position: | chr29:16200470-16200261 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 103, 197 |
| Conread position: | 300-519 |
| Cow position: | chr29:35677535-35677314 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 149 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 18, 25 |
| Conread position: | 301-517 |
| Cow position: | chr29:33511720-33511500 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 303-513 |
| Cow position: | chr29:28948985-28949204 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 71, 33 |
| Conread position: | 307-508 |
| Cow position: | chr29:35084207-35084007 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 144, 0 |
| Conread position: | 307-515 |
| Cow position: | chr29:22127885-22128090 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 182, 91 |
| Conread position: | 308-471 |
| Cow position: | chr29:23825194-23825033 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 308-490 |
| Cow position: | chr29:32215725-32215902 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 308-510 |
| Cow position: | chr29:36781288-36781092 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 308-518 |
| Cow position: | chr29:40351059-40350853 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 177, 18 |
| Conread position: | 309-508 |
| Cow position: | chr29:36530884-36531081 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 309-521 |
| Cow position: | chr29:34355984-34356203 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 153 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 11, 78 |
| Conread position: | 319-521 |
| Cow position: | chr29:29265055-29264849 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 321-498 |
| Cow position: | chr29:28066516-28066686 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 321-504 |
| Cow position: | chr29:33143325-33143146 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 55, 67 |
| Conread position: | 324-471 |
| Cow position: | chr29:38582000-38582149 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 324-476 |
| Cow position: | chr29:23991798-23991645 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 64, 20 |
| Conread position: | 324-488 |
| Cow position: | chr29:10203804-10203965 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 324-490 |
| Cow position: | chr29:15947199-15947367 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 324-497 |
| Cow position: | chr29:22577147-22576973 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 324-498 |
| Cow position: | chr29:936239-936409 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 52, 64 |
| Conread position: | 324-501 |
| Cow position: | chr29:44895370-44895192 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 73, 63 |
| Conread position: | 324-507 |
| Cow position: | chr29:26211084-26211268 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 324-508 |
| Cow position: | chr29:24181670-24181854 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 324-508 |
| Cow position: | chr29:34359789-34359609 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 155, 74 |
| Conread position: | 324-509 |
| Cow position: | chr29:38732185-38732375 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 324-514 |
| Cow position: | chr29:16609780-16609972 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 324-514 |
| Cow position: | chr29:23874492-23874684 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 324-515 |
| Cow position: | chr29:5520453-5520261 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 145 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 74, 94 |
| Conread position: | 324-521 |
| Cow position: | chr29:3549635-3549835 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 324-521 |
| Cow position: | chr29:4120886-4121085 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 325-476 |
| Cow position: | chr29:36632827-36632676 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 73, 87 |
| Conread position: | 325-486 |
| Cow position: | chr29:5892878-5893040 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 78, 141 |
| Conread position: | 325-495 |
| Cow position: | chr29:26631074-26631252 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 325-495 |
| Cow position: | chr29:28813941-28813769 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 69, 62 |
| Conread position: | 325-495 |
| Cow position: | chr29:40117605-40117768 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 325-498 |
| Cow position: | chr29:11081363-11081186 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 325-498 |
| Cow position: | chr29:26017469-26017294 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 325-500 |
| Cow position: | chr29:27911624-27911800 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 73, 27 |
| Conread position: | 325-507 |
| Cow position: | chr29:9378670-9378848 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 325-507 |
| Cow position: | chr29:27961934-27961749 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 78, 63 |
| Conread position: | 325-508 |
| Cow position: | chr29:11894731-11894917 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 325-510 |
| Cow position: | chr29:23678742-23678920 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 165, 76 |
| Conread position: | 325-517 |
| Cow position: | chr29:22729600-22729786 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 325-520 |
| Cow position: | chr29:3662100-3661897 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 325-520 |
| Cow position: | chr29:17436784-17436980 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 78, 27 |
| Conread position: | 325-520 |
| Cow position: | chr29:41223198-41223389 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 76, 40 |
| Conread position: | 326-486 |
| Cow position: | chr29:41422877-41422715 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 326-486 |
| Cow position: | chr29:43088342-43088500 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 326-488 |
| Cow position: | chr29:42404981-42405145 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 326-490 |
| Cow position: | chr29:17109991-17110151 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 59, 63 |
| Conread position: | 326-493 |
| Cow position: | chr29:396440-396603 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 326-498 |
| Cow position: | chr29:2414718-2414548 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 70, 143 |
| Conread position: | 326-500 |
| Cow position: | chr29:22533995-22534171 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 326-501 |
| Cow position: | chr29:19187060-19187235 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 326-507 |
| Cow position: | chr29:22028921-22028748 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 50, 62 |
| Conread position: | 326-513 |
| Cow position: | chr29:14746814-14746999 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 326-514 |
| Cow position: | chr29:4484130-4484319 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 72, 92 |
| Conread position: | 326-516 |
| Cow position: | chr29:19949341-19949527 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 59, 63 |
| Conread position: | 326-519 |
| Cow position: | chr29:6819648-6819844 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 326-521 |
| Cow position: | chr29:16735258-16735457 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 327-517 |
| Cow position: | chr29:6517264-6517453 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 78, 41 |
| Conread position: | 328-506 |
| Cow position: | chr29:22776115-22776289 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 328-520 |
| Cow position: | chr29:4624963-4624770 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 54, 156 |
| Conread position: | 331-506 |
| Cow position: | chr29:7040833-7040654 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 21, 35 |
| Conread position: | 331-511 |
| Cow position: | chr29:30227242-30227061 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 74, 34 |
| Conread position: | 331-520 |
| Cow position: | chr29:22019148-22018957 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 147, 0 |
| Conread position: | 331-521 |
| Cow position: | chr29:1007860-1008049 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 45, 54 |
| Conread position: | 332-517 |
| Cow position: | chr29:25432493-25432679 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 66, 117 |
| Conread position: | 333-490 |
| Cow position: | chr29:17462739-17462581 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 129, 81 |
| Conread position: | 333-494 |
| Cow position: | chr29:20626608-20626772 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 333-495 |
| Cow position: | chr29:24065727-24065887 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 333-495 |
| Cow position: | chr29:24604937-24605099 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 76, 70 |
| Conread position: | 333-498 |
| Cow position: | chr29:16438738-16438565 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 333-517 |
| Cow position: | chr29:11685208-11685395 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 333-517 |
| Cow position: | chr29:22690266-22690452 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 333-517 |
| Cow position: | chr29:24319923-24319737 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 334-495 |
| Cow position: | chr29:17085640-17085478 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 335-490 |
| Cow position: | chr29:36357169-36357326 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 335-507 |
| Cow position: | chr29:36546739-36546567 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 74, 62 |
| Conread position: | 335-513 |
| Cow position: | chr29:22447914-22448094 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 335-516 |
| Cow position: | chr29:37316359-37316177 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 67, 154 |
| Conread position: | 335-519 |
| Cow position: | chr29:40112425-40112608 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 63, 88 |
| Conread position: | 335-521 |
| Cow position: | chr29:20256261-20256449 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 338-489 |
| Cow position: | chr29:23735042-23734889 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 339-517 |
| Cow position: | chr29:3584069-3583890 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 70, 25 |
| Conread position: | 340-514 |
| Cow position: | chr29:42887017-42887193 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 341-518 |
| Cow position: | chr29:24119451-24119272 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 343-498 |
| Cow position: | chr29:35281515-35281678 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 346-515 |
| Cow position: | chr29:22720589-22720421 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 151, 55 |
| Conread position: | 349-498 |
| Cow position: | chr29:4741334-4741182 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 365-521 |
| Cow position: | chr29:26777081-26777239 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 415-501 |
| Cow position: | chr29:27640347-27640261 (view UCSC Genome Browser custom track) |
| Alignm length: | 87 |
| Alignm identity: | 76 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.