Cow genome map
| Conread name: | mCP0-MI-P-CP0-nvk-b-11-0-UI.s1 |
| Conread position: | 27-366 |
| Cow position: | chr1:29606762-29606417 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 232 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 18, 67 |
| Conread position: | 43-243 |
| Cow position: | chr1:41463941-41464149 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 44-232 |
| Cow position: | chr1:81838063-81837870 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 44-264 |
| Cow position: | chr1:32624587-32624812 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 44-308 |
| Cow position: | chr1:1257589-1257853 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 201, 45 |
| Conread position: | 44-319 |
| Cow position: | chr1:86669879-86669618 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 85, 45 |
| Conread position: | 44-366 |
| Cow position: | chr1:73554543-73554869 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 74 |
| Conread position: | 44-426 |
| Cow position: | chr1:7200409-7200796 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 265 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 54, 93 |
| Conread position: | 44-439 |
| Cow position: | chr1:52539941-52539540 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 280 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 40, 72 |
| Conread position: | 44-440 |
| Cow position: | chr1:51313477-51313082 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 45 |
| Conread position: | 44-445 |
| Cow position: | chr1:93413555-93413146 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 279 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 60, 74 |
| Conread position: | 46-202 |
| Cow position: | chr1:35246628-35246788 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 46-210 |
| Cow position: | chr1:44083014-44083178 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 88, 98 |
| Conread position: | 46-288 |
| Cow position: | chr1:71676774-71676537 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 52, 102 |
| Conread position: | 47-445 |
| Cow position: | chr1:50939714-50939310 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 279 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 103, 42 |
| Conread position: | 47-448 |
| Cow position: | chr1:34362953-34363354 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 88 |
| Conread position: | 52-367 |
| Cow position: | chr1:71920379-71920700 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 226 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 37, 271 |
| Conread position: | 60-447 |
| Cow position: | chr1:30883338-30882945 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 270 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 33, 83 |
| Conread position: | 86-367 |
| Cow position: | chr1:89186116-89185842 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 79, 175 |
| Conread position: | 86-448 |
| Cow position: | chr1:56425258-56425628 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 246 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 20, 209 |
| Conread position: | 86-448 |
| Cow position: | chr1:76749044-76748679 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 251 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 20, 175 |
| Conread position: | 88-447 |
| Cow position: | chr1:61331613-61331247 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 245 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 18, 227 |
Show alignments to all cow chromosomes.