Cow genome map
| Conread name: | mCP0-MI-P-CP0-nvk-b-11-0-UI.s1 |
| Conread position: | 1-447 |
| Cow position: | chr16:48909132-48908696 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 299 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 96, 50 |
| Conread position: | 1-448 |
| Cow position: | chr16:42733752-42733311 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 309 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 88, 45 |
| Conread position: | 44-202 |
| Cow position: | chr16:18286335-18286495 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 44-219 |
| Cow position: | chr16:5164088-5163909 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 44-292 |
| Cow position: | chr16:7648612-7648854 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 58, 116 |
| Conread position: | 44-296 |
| Cow position: | chr16:31504489-31504728 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 47, 32 |
| Conread position: | 44-387 |
| Cow position: | chr16:11219723-11220074 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 238 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 47, 128 |
| Conread position: | 44-443 |
| Cow position: | chr16:12175500-12175089 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 285 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 47, 24 |
| Conread position: | 44-445 |
| Cow position: | chr16:28864642-28864241 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 189 |
| Conread position: | 45-243 |
| Cow position: | chr16:44434848-44435047 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 54, 44 |
| Conread position: | 45-419 |
| Cow position: | chr16:13406760-13407140 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 259 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 44, 72 |
| Conread position: | 45-446 |
| Cow position: | chr16:44219183-44219578 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 273 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 15, 84 |
| Conread position: | 45-448 |
| Cow position: | chr16:18951431-18951029 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 279 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 38, 204 |
| Conread position: | 46-251 |
| Cow position: | chr16:20721279-20721489 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 39, 129 |
| Conread position: | 47-367 |
| Cow position: | chr16:44704185-44704504 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 77 |
| Conread position: | 53-311 |
| Cow position: | chr16:41159860-41160110 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 73, 29 |
| Conread position: | 53-435 |
| Cow position: | chr16:52589033-52588653 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 257 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 189, 158 |
| Conread position: | 54-268 |
| Cow position: | chr16:5632431-5632218 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 51, 41 |
| Conread position: | 69-435 |
| Cow position: | chr16:29539214-29538846 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 254 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 36, 11 |
| Conread position: | 86-366 |
| Cow position: | chr16:49742917-49742640 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 200 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 20, 58 |
| Conread position: | 86-411 |
| Cow position: | chr16:23403426-23403757 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 231 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 20, 59 |
| Conread position: | 86-435 |
| Cow position: | chr16:16540021-16540365 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 244 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 14, 65 |
| Conread position: | 88-436 |
| Cow position: | chr16:40293557-40293202 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 18, 228 |
| Conread position: | 88-436 |
| Cow position: | chr16:45534076-45534421 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 231 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 18, 155 |
| Conread position: | 115-435 |
| Cow position: | chr16:46385906-46385580 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 127, 188 |
Show alignments to all cow chromosomes.