Cow genome map
| Conread name: | mCP0-MI-P-CP0-nvk-b-11-0-UI.s1 |
| Conread position: | 44-201 |
| Cow position: | chr5:51818664-51818825 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 44-366 |
| Cow position: | chr5:49912090-49912417 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 54, 113 |
| Conread position: | 44-367 |
| Cow position: | chr5:57969841-57970151 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 150 |
| Conread position: | 44-439 |
| Cow position: | chr5:50201910-50201510 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 272 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 45, 92 |
| Conread position: | 44-448 |
| Cow position: | chr5:62143876-62143461 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 277 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 56, 88 |
| Conread position: | 44-449 |
| Cow position: | chr5:28678362-28677957 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 96 |
| Conread position: | 45-447 |
| Cow position: | chr5:28529233-28528842 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 275 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 48, 109 |
| Conread position: | 46-311 |
| Cow position: | chr5:28331536-28331269 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 43, 80 |
| Conread position: | 50-411 |
| Cow position: | chr5:55676967-55677324 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 20, 61 |
| Conread position: | 54-399 |
| Cow position: | chr5:15856129-15855786 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 77, 90 |
| Conread position: | 86-436 |
| Cow position: | chr5:15677192-15677543 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 63, 70 |
| Conread position: | 86-448 |
| Cow position: | chr5:62436254-62436618 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 244 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 19, 125 |
| Conread position: | 88-449 |
| Cow position: | chr5:29763044-29763397 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 206 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 30, 125 |
| Conread position: | 103-400 |
| Cow position: | chr5:25496260-25495963 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 143, 163 |
| Conread position: | 110-368 |
| Cow position: | chr5:54868372-54868626 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 136, 204 |
| Conread position: | 115-422 |
| Cow position: | chr5:49221338-49221024 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 214 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 131, 199 |
| Conread position: | 176-448 |
| Cow position: | chr5:34584963-34584695 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 72, 138 |
Show alignments to all cow chromosomes.