Cow genome map

Conread name: mCP1-MI-P-CP1-nwi-c-12-0-UI.s1

Conread position: 13-473
Cow position: chr20:31846550-31846086 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 150

Conread position: 17-470
Cow position: chr20:18322275-18321840 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 150

Conread position: 26-356
Cow position: chr20:14756975-14756639 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 185

Conread position: 26-474
Cow position: chr20:9707840-9707398 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 107

Conread position: 26-474
Cow position: chr20:37154675-37154230 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 62

Conread position: 29-272
Cow position: chr20:21338808-21338578 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 187
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 41, 140

Conread position: 30-157
Cow position: chr20:7810547-7810419 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 106
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 39, 0

Conread position: 30-249
Cow position: chr20:35145100-35145312 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 167
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 56, 49

Conread position: 30-258
Cow position: chr20:32351895-32352117 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 168
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 40, 109

Conread position: 30-262
Cow position: chr20:18092605-18092376 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 178
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 39, 110

Conread position: 30-291
Cow position: chr20:27994227-27993970 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 197
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 60, 37

Conread position: 30-304
Cow position: chr20:6239840-6239580 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 62

Conread position: 30-304
Cow position: chr20:32164809-32164539 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 52

Conread position: 30-311
Cow position: chr20:16106743-16107023 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 179
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 39, 141

Conread position: 30-323
Cow position: chr20:25856470-25856750 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 31

Conread position: 30-338
Cow position: chr20:9589070-9589375 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 128

Conread position: 30-356
Cow position: chr20:9996829-9997154 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 234
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 37, 146

Conread position: 30-356
Cow position: chr20:10921629-10921308 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 25

Conread position: 30-387
Cow position: chr20:35112326-35112678 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 109

Conread position: 30-388
Cow position: chr20:40255958-40256299 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 132

Conread position: 30-401
Cow position: chr20:20439674-20439306 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 141

Conread position: 30-405
Cow position: chr20:14925347-14924975 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 141

Conread position: 30-436
Cow position: chr20:15527040-15527444 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 141

Conread position: 30-444
Cow position: chr20:15780905-15780504 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 57

Conread position: 30-465
Cow position: chr20:12332978-12333395 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 54

Conread position: 30-466
Cow position: chr20:6055429-6054994 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 54

Conread position: 30-467
Cow position: chr20:35844138-35843698 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 146

Conread position: 30-469
Cow position: chr20:33731049-33731476 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 73

Conread position: 30-470
Cow position: chr20:10035444-10035019 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 13

Conread position: 30-470
Cow position: chr20:19155867-19155436 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 63

Conread position: 30-471
Cow position: chr20:34598064-34597623 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 64

Conread position: 30-473
Cow position: chr20:22185718-22185287 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 43

Conread position: 30-473
Cow position: chr20:28725056-28725494 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 12

Conread position: 30-473
Cow position: chr20:29371126-29370683 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 130

Conread position: 30-473
Cow position: chr20:30384950-30384511 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 141

Conread position: 30-474
Cow position: chr20:753736-754177 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 141

Conread position: 30-474
Cow position: chr20:6135696-6135255 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 141

Conread position: 30-474
Cow position: chr20:6258998-6258559 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 25

Conread position: 30-474
Cow position: chr20:6550703-6550262 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 141

Conread position: 30-474
Cow position: chr20:8970598-8970174 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 141

Conread position: 30-474
Cow position: chr20:9223147-9223588 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 141

Conread position: 30-474
Cow position: chr20:12177195-12176754 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 141

Conread position: 30-474
Cow position: chr20:12435104-12434664 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 13

Conread position: 30-474
Cow position: chr20:12568021-12567591 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 137

Conread position: 30-474
Cow position: chr20:13654039-13653609 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 101

Conread position: 30-474
Cow position: chr20:13766187-13766618 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 132

Conread position: 30-474
Cow position: chr20:15090077-15089637 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 130

Conread position: 30-474
Cow position: chr20:16515618-16516060 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 141

Conread position: 30-474
Cow position: chr20:17657937-17657497 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 141

Conread position: 30-474
Cow position: chr20:22208916-22209357 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 141

Conread position: 30-474
Cow position: chr20:23466354-23465918 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 141

Conread position: 30-474
Cow position: chr20:23802445-23802886 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 141

Conread position: 30-474
Cow position: chr20:24399570-24399130 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 146

Conread position: 30-474
Cow position: chr20:27876781-27877219 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 130

Conread position: 30-474
Cow position: chr20:28165143-28165571 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 39

Conread position: 30-474
Cow position: chr20:34458978-34458538 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 144

Conread position: 30-474
Cow position: chr20:37271565-37272002 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 12

Conread position: 31-389
Cow position: chr20:12489849-12489499 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 247
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 39, 92

Conread position: 31-458
Cow position: chr20:9536198-9536616 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 51

Conread position: 31-461
Cow position: chr20:10839160-10838737 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 36

Conread position: 31-473
Cow position: chr20:17668037-17668478 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 266

Conread position: 31-473
Cow position: chr20:28560593-28560159 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 24

Conread position: 31-474
Cow position: chr20:5958849-5958409 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 63

Conread position: 31-474
Cow position: chr20:28294617-28295053 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 125

Conread position: 31-474
Cow position: chr20:35159289-35158855 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 53

Conread position: 32-316
Cow position: chr20:7568668-7568390 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 210
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 183, 88

Conread position: 32-316
Cow position: chr20:7593155-7592876 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 209
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 183, 88

Conread position: 32-473
Cow position: chr20:41111124-41110693 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 57

Conread position: 33-444
Cow position: chr20:6097367-6096974 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 117

Conread position: 33-474
Cow position: chr20:826078-826521 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 138

Conread position: 33-474
Cow position: chr20:15295316-15295753 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 138

Conread position: 34-474
Cow position: chr20:19145931-19146364 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 97

Conread position: 35-459
Cow position: chr20:29314158-29314570 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 292
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 94, 43

Conread position: 36-474
Cow position: chr20:11516739-11516306 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 140

Conread position: 36-474
Cow position: chr20:24567968-24567536 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 66

Conread position: 36-474
Cow position: chr20:35093838-35094259 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 135

Conread position: 37-459
Cow position: chr20:24507777-24507353 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 58

Conread position: 37-474
Cow position: chr20:9339316-9339751 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 100

Conread position: 40-447
Cow position: chr20:16526602-16527006 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 131

Conread position: 42-474
Cow position: chr20:11454296-11453865 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 129

Conread position: 42-474
Cow position: chr20:21398123-21398537 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 130

Conread position: 44-474
Cow position: chr20:10405003-10405432 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 127

Conread position: 45-467
Cow position: chr20:9700633-9701041 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 39

Conread position: 48-390
Cow position: chr20:35037067-35036728 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 123

Conread position: 54-473
Cow position: chr20:31220606-31221006 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 13

Conread position: 58-390
Cow position: chr20:9511486-9511166 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 53

Conread position: 58-470
Cow position: chr20:35128285-35128707 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 114

Conread position: 60-332
Cow position: chr20:10494517-10494786 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 194
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 159, 122

Conread position: 60-444
Cow position: chr20:21768287-21767906 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 33

Conread position: 71-474
Cow position: chr20:31260845-31261233 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 64

Conread position: 76-474
Cow position: chr20:15234959-15235336 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 19

Conread position: 79-257
Cow position: chr20:6474517-6474681 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 143
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 7, 97

Conread position: 81-474
Cow position: chr20:21018664-21019061 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 68

Conread position: 85-474
Cow position: chr20:20779435-20779044 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 87

Conread position: 86-470
Cow position: chr20:40423976-40423602 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 57

Conread position: 90-426
Cow position: chr20:21015638-21015311 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 5

Conread position: 92-408
Cow position: chr20:17845072-17845381 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 32

Conread position: 92-474
Cow position: chr20:22274754-22274373 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 36

Conread position: 92-474
Cow position: chr20:28323836-28324214 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 83

Conread position: 96-445
Cow position: chr20:31564850-31564511 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 233
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 41, 81

Conread position: 96-474
Cow position: chr20:13619426-13619058 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 74

Conread position: 97-474
Cow position: chr20:40781101-40781475 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 73

Conread position: 98-470
Cow position: chr20:5077314-5077687 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 77

Conread position: 100-473
Cow position: chr20:6017943-6017576 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 70

Conread position: 101-467
Cow position: chr20:12996876-12996527 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 74

Conread position: 102-390
Cow position: chr20:33563785-33564068 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 68

Conread position: 102-474
Cow position: chr20:39375794-39375430 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 34

Conread position: 110-474
Cow position: chr20:16584377-16584734 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 49

Conread position: 116-474
Cow position: chr20:40587967-40588318 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 54

Conread position: 118-474
Cow position: chr20:16942255-16941910 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 24

Conread position: 118-474
Cow position: chr20:30737259-30736907 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 57

Conread position: 121-474
Cow position: chr20:30816685-30817031 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 33

Conread position: 124-275
Cow position: chr20:6500809-6500958 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 91, 48

Conread position: 130-474
Cow position: chr20:39391746-39391406 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 40

Conread position: 131-474
Cow position: chr20:18099362-18099696 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 23

Conread position: 132-321
Cow position: chr20:25844935-25844752 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 139
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 88, 38

Conread position: 133-474
Cow position: chr20:1024859-1024517 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 158

Conread position: 149-474
Cow position: chr20:20983188-20983524 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 142

Conread position: 160-444
Cow position: chr20:20353719-20353441 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 209
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 55, 115

Conread position: 161-443
Cow position: chr20:10538057-10538340 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 182

Conread position: 165-474
Cow position: chr20:12421449-12421142 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 113

Conread position: 166-466
Cow position: chr20:16448898-16449195 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 126

Conread position: 166-474
Cow position: chr20:2881421-2881112 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 125

Conread position: 170-390
Cow position: chr20:14093981-14094202 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 168
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 47, 105

Conread position: 170-471
Cow position: chr20:9987580-9987874 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 218
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 51, 45

Conread position: 174-474
Cow position: chr20:40057946-40058239 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 99

Conread position: 176-474
Cow position: chr20:19314117-19313828 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 12

Conread position: 180-474
Cow position: chr20:3405784-3405482 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 169

Conread position: 183-474
Cow position: chr20:38123167-38123468 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 15

Conread position: 196-473
Cow position: chr20:28714773-28714491 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 147

Conread position: 200-474
Cow position: chr20:10288139-10288419 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 144

Conread position: 200-474
Cow position: chr20:27339301-27339570 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 26

Conread position: 206-458
Cow position: chr20:21925777-21925523 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 72

Conread position: 216-474
Cow position: chr20:26826380-26826126 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 0

Conread position: 221-390
Cow position: chr20:8577029-8577188 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 132
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 45, 0

Conread position: 221-470
Cow position: chr20:34776380-34776623 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 221-474
Cow position: chr20:7399959-7399713 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 50

Conread position: 222-470
Cow position: chr20:5785859-5786107 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 118

Conread position: 222-473
Cow position: chr20:21324359-21324601 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 224-474
Cow position: chr20:12241637-12241379 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 114

Show alignments to all cow chromosomes.