Cow genome map
| Conread name: | mCP1-MI-P-CP1-nwi-c-12-0-UI.s1 |
| Conread position: | 11-454 |
| Cow position: | chr21:48234929-48234493 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 157 |
| Conread position: | 18-390 |
| Cow position: | chr21:13749551-13749921 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 159 |
| Conread position: | 25-467 |
| Cow position: | chr21:12153225-12153651 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 32 |
| Conread position: | 26-470 |
| Cow position: | chr21:25156699-25157126 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 41 |
| Conread position: | 26-474 |
| Cow position: | chr21:2905391-2904947 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 81 |
| Conread position: | 29-474 |
| Cow position: | chr21:13090376-13089956 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 6 |
| Conread position: | 30-166 |
| Cow position: | chr21:34255173-34255036 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 35, 30 |
| Conread position: | 30-228 |
| Cow position: | chr21:33420566-33420374 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 187, 78 |
| Conread position: | 30-250 |
| Cow position: | chr21:18846929-18846712 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 184, 85 |
| Conread position: | 30-258 |
| Cow position: | chr21:25986821-25987046 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 62 |
| Conread position: | 30-276 |
| Cow position: | chr21:13162839-13163060 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 30, 13 |
| Conread position: | 30-279 |
| Cow position: | chr21:18792034-18791782 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 30-297 |
| Cow position: | chr21:34657399-34657661 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 57 |
| Conread position: | 30-310 |
| Cow position: | chr21:24297658-24297393 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 220 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 34, 12 |
| Conread position: | 30-314 |
| Cow position: | chr21:4188941-4189229 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 263 |
| Conread position: | 30-316 |
| Cow position: | chr21:17418233-17417951 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 42, 147 |
| Conread position: | 30-317 |
| Cow position: | chr21:24826729-24826445 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 39, 72 |
| Conread position: | 30-335 |
| Cow position: | chr21:39059914-39059616 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 96 |
| Conread position: | 30-362 |
| Cow position: | chr21:17144093-17144422 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 141 |
| Conread position: | 30-377 |
| Cow position: | chr21:25190056-25190404 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 141 |
| Conread position: | 30-380 |
| Cow position: | chr21:22315932-22316267 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 255 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 39, 110 |
| Conread position: | 30-390 |
| Cow position: | chr21:4791520-4791875 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 142 |
| Conread position: | 30-390 |
| Cow position: | chr21:17720986-17721340 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 47 |
| Conread position: | 30-390 |
| Cow position: | chr21:23501270-23500913 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 97 |
| Conread position: | 30-392 |
| Cow position: | chr21:6966067-6965709 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 141 |
| Conread position: | 30-399 |
| Cow position: | chr21:2928469-2928104 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 142 |
| Conread position: | 30-417 |
| Cow position: | chr21:20244195-20243813 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 141 |
| Conread position: | 30-419 |
| Cow position: | chr21:49655778-49655394 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 141 |
| Conread position: | 30-433 |
| Cow position: | chr21:2503148-2503543 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 133 |
| Conread position: | 30-433 |
| Cow position: | chr21:9895767-9896149 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 55 |
| Conread position: | 30-439 |
| Cow position: | chr21:18819231-18818837 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 112 |
| Conread position: | 30-458 |
| Cow position: | chr21:4812933-4812512 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 72 |
| Conread position: | 30-458 |
| Cow position: | chr21:48530573-48531001 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 12 |
| Conread position: | 30-463 |
| Cow position: | chr21:470699-471124 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 89 |
| Conread position: | 30-465 |
| Cow position: | chr21:4079428-4079850 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 67 |
| Conread position: | 30-466 |
| Cow position: | chr21:22463596-22464027 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 53 |
| Conread position: | 30-467 |
| Cow position: | chr21:18931580-18932012 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 146 |
| Conread position: | 30-470 |
| Cow position: | chr21:31252392-31252840 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 109 |
| Conread position: | 30-471 |
| Cow position: | chr21:2514256-2514690 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 141 |
| Conread position: | 30-471 |
| Cow position: | chr21:29499943-29500378 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 141 |
| Conread position: | 30-473 |
| Cow position: | chr21:17474124-17474559 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 24 |
| Conread position: | 30-473 |
| Cow position: | chr21:19965012-19965441 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 50 |
| Conread position: | 30-473 |
| Cow position: | chr21:47648745-47649188 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 134 |
| Conread position: | 30-474 |
| Cow position: | chr21:149552-149992 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 141 |
| Conread position: | 30-474 |
| Cow position: | chr21:1057867-1058317 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 141 |
| Conread position: | 30-474 |
| Cow position: | chr21:2419602-2420039 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 106 |
| Conread position: | 30-474 |
| Cow position: | chr21:2878435-2877996 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 141 |
| Conread position: | 30-474 |
| Cow position: | chr21:3766365-3765922 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 141 |
| Conread position: | 30-474 |
| Cow position: | chr21:4559665-4559227 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 63 |
| Conread position: | 30-474 |
| Cow position: | chr21:4586274-4585830 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 146 |
| Conread position: | 30-474 |
| Cow position: | chr21:5642434-5641992 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 142 |
| Conread position: | 30-474 |
| Cow position: | chr21:6623216-6623665 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 152 |
| Conread position: | 30-474 |
| Cow position: | chr21:7155791-7156220 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 129 |
| Conread position: | 30-474 |
| Cow position: | chr21:9010703-9010259 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 144 |
| Conread position: | 30-474 |
| Cow position: | chr21:9208718-9209153 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 84 |
| Conread position: | 30-474 |
| Cow position: | chr21:10853670-10854102 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 141 |
| Conread position: | 30-474 |
| Cow position: | chr21:13302614-13303041 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 43 |
| Conread position: | 30-474 |
| Cow position: | chr21:15546283-15545845 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 98 |
| Conread position: | 30-474 |
| Cow position: | chr21:16277807-16278243 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 133 |
| Conread position: | 30-474 |
| Cow position: | chr21:16890433-16889998 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 12 |
| Conread position: | 30-474 |
| Cow position: | chr21:18285211-18285647 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 141 |
| Conread position: | 30-474 |
| Cow position: | chr21:19351456-19351015 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 130 |
| Conread position: | 30-474 |
| Cow position: | chr21:22719693-22719256 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 144 |
| Conread position: | 30-474 |
| Cow position: | chr21:26874997-26875437 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 85 |
| Conread position: | 30-474 |
| Cow position: | chr21:27066194-27065754 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 141 |
| Conread position: | 30-474 |
| Cow position: | chr21:27375511-27375967 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 67 |
| Conread position: | 30-474 |
| Cow position: | chr21:27608297-27607847 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 141 |
| Conread position: | 30-474 |
| Cow position: | chr21:28259074-28259506 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 50 |
| Conread position: | 30-474 |
| Cow position: | chr21:28476707-28477141 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 54 |
| Conread position: | 30-474 |
| Cow position: | chr21:29423468-29423904 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 12 |
| Conread position: | 30-474 |
| Cow position: | chr21:30595685-30595245 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 141 |
| Conread position: | 30-474 |
| Cow position: | chr21:30627674-30627242 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 129 |
| Conread position: | 30-474 |
| Cow position: | chr21:30966538-30966097 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 130 |
| Conread position: | 30-474 |
| Cow position: | chr21:31512865-31512426 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 95 |
| Conread position: | 30-474 |
| Cow position: | chr21:33256961-33257400 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 141 |
| Conread position: | 30-474 |
| Cow position: | chr21:33316961-33316520 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 141 |
| Conread position: | 30-474 |
| Cow position: | chr21:34684454-34684869 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 78 |
| Conread position: | 30-474 |
| Cow position: | chr21:36376395-36376826 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 127 |
| Conread position: | 30-474 |
| Cow position: | chr21:36534803-36534368 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 141 |
| Conread position: | 30-474 |
| Cow position: | chr21:37923592-37924022 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 12 |
| Conread position: | 30-474 |
| Cow position: | chr21:42917198-42917639 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 141 |
| Conread position: | 30-474 |
| Cow position: | chr21:47977672-47978113 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 141 |
| Conread position: | 31-182 |
| Cow position: | chr21:3804374-3804223 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 32, 52 |
| Conread position: | 31-231 |
| Cow position: | chr21:1284540-1284342 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 182, 141 |
| Conread position: | 31-250 |
| Cow position: | chr21:32573386-32573605 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 119, 143 |
| Conread position: | 31-474 |
| Cow position: | chr21:28597998-28598411 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 26 |
| Conread position: | 31-474 |
| Cow position: | chr21:33832573-33832131 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 17 |
| Conread position: | 32-407 |
| Cow position: | chr21:46974323-46973966 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 69 |
| Conread position: | 32-467 |
| Cow position: | chr21:43110-43542 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 143 |
| Conread position: | 32-474 |
| Cow position: | chr21:33934498-33934068 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 94 |
| Conread position: | 32-474 |
| Cow position: | chr21:43404030-43403592 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 54 |
| Conread position: | 33-146 |
| Cow position: | chr21:15398541-15398653 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 94 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 31, 70 |
| Conread position: | 33-390 |
| Cow position: | chr21:31275751-31276099 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 79 |
| Conread position: | 33-390 |
| Cow position: | chr21:32534234-32534574 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 52 |
| Conread position: | 33-474 |
| Cow position: | chr21:81154-81589 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 99 |
| Conread position: | 33-474 |
| Cow position: | chr21:2768435-2767988 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 80 |
| Conread position: | 33-474 |
| Cow position: | chr21:27620094-27619674 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 98 |
| Conread position: | 33-474 |
| Cow position: | chr21:28915567-28915131 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 106 |
| Conread position: | 33-474 |
| Cow position: | chr21:47428750-47429186 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 138 |
| Conread position: | 36-401 |
| Cow position: | chr21:4722063-4722419 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 261 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 185, 34 |
| Conread position: | 40-287 |
| Cow position: | chr21:37323389-37323143 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 30, 134 |
| Conread position: | 41-327 |
| Cow position: | chr21:49647553-49647273 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 21, 131 |
| Conread position: | 42-467 |
| Cow position: | chr21:10570704-10571109 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 129 |
| Conread position: | 42-474 |
| Cow position: | chr21:45119-45561 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 16 |
| Conread position: | 42-474 |
| Cow position: | chr21:13300241-13300660 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 46 |
| Conread position: | 42-474 |
| Cow position: | chr21:26628185-26628613 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 129 |
| Conread position: | 43-474 |
| Cow position: | chr21:4541760-4541341 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 35 |
| Conread position: | 44-390 |
| Cow position: | chr21:30565170-30565496 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 11 |
| Conread position: | 44-466 |
| Cow position: | chr21:44862174-44861754 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 23 |
| Conread position: | 48-474 |
| Cow position: | chr21:40267999-40267591 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 91 |
| Conread position: | 57-458 |
| Cow position: | chr21:4191730-4192122 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 270 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 161, 16 |
| Conread position: | 58-474 |
| Cow position: | chr21:38020619-38021026 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 32 |
| Conread position: | 60-474 |
| Cow position: | chr21:23802003-23801596 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 34 |
| Conread position: | 61-369 |
| Cow position: | chr21:42364376-42364676 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 10 |
| Conread position: | 61-470 |
| Cow position: | chr21:21217037-21216625 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 57 |
| Conread position: | 68-470 |
| Cow position: | chr21:44762236-44761840 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 38 |
| Conread position: | 73-474 |
| Cow position: | chr21:28210318-28210702 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 19 |
| Conread position: | 74-467 |
| Cow position: | chr21:4035829-4035453 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 74-474 |
| Cow position: | chr21:17207628-17208013 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 9 |
| Conread position: | 77-474 |
| Cow position: | chr21:26830110-26829721 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 29 |
| Conread position: | 79-383 |
| Cow position: | chr21:21000924-21000637 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 217 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 28, 96 |
| Conread position: | 82-376 |
| Cow position: | chr21:18979707-18979417 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 88 |
| Conread position: | 91-429 |
| Cow position: | chr21:26240734-26241040 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 252 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 124, 10 |
| Conread position: | 92-473 |
| Cow position: | chr21:38899922-38900291 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 19 |
| Conread position: | 92-474 |
| Cow position: | chr21:20263208-20262820 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 78 |
| Conread position: | 95-322 |
| Cow position: | chr21:36977466-36977245 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 141, 80 |
| Conread position: | 96-458 |
| Cow position: | chr21:42842817-42842459 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 74 |
| Conread position: | 97-470 |
| Cow position: | chr21:19973899-19974266 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 75 |
| Conread position: | 100-458 |
| Cow position: | chr21:31974613-31974972 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 56 |
| Conread position: | 101-474 |
| Cow position: | chr21:13111645-13111281 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 69 |
| Conread position: | 102-474 |
| Cow position: | chr21:1766048-1765690 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 15 |
| Conread position: | 106-474 |
| Cow position: | chr21:4278789-4279152 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 65 |
| Conread position: | 110-474 |
| Cow position: | chr21:744209-743865 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 21 |
| Conread position: | 131-443 |
| Cow position: | chr21:8890388-8890711 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 39 |
| Conread position: | 132-467 |
| Cow position: | chr21:39764032-39764354 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 22 |
| Conread position: | 134-474 |
| Cow position: | chr21:33349875-33350219 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 10 |
| Conread position: | 140-467 |
| Cow position: | chr21:48108667-48108337 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 30 |
| Conread position: | 145-474 |
| Cow position: | chr21:12076214-12075886 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 118 |
| Conread position: | 151-474 |
| Cow position: | chr21:3586379-3586054 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 42 |
| Conread position: | 161-474 |
| Cow position: | chr21:1463438-1463751 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 187 |
| Conread position: | 166-390 |
| Cow position: | chr21:48486233-48486011 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 169 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 166-474 |
| Cow position: | chr21:27864319-27864004 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 112 |
| Conread position: | 168-379 |
| Cow position: | chr21:940480-940263 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 49, 13 |
| Conread position: | 171-414 |
| Cow position: | chr21:21267697-21267455 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 58, 169 |
| Conread position: | 174-369 |
| Cow position: | chr21:451181-451380 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 43, 100 |
| Conread position: | 174-443 |
| Cow position: | chr21:28872354-28872613 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 44, 95 |
| Conread position: | 176-474 |
| Cow position: | chr21:10668779-10668497 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 99 |
| Conread position: | 190-445 |
| Cow position: | chr21:451438-451697 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 84 |
| Conread position: | 192-474 |
| Cow position: | chr21:37518132-37517848 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 83 |
| Conread position: | 195-474 |
| Cow position: | chr21:29214918-29214639 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 89 |
| Conread position: | 195-474 |
| Cow position: | chr21:33947835-33947561 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 205 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 23, 9 |
| Conread position: | 198-438 |
| Cow position: | chr21:30894254-30894495 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 24, 105 |
| Conread position: | 215-470 |
| Cow position: | chr21:3923500-3923753 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 215-474 |
| Cow position: | chr21:28616875-28617122 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 60 |
| Conread position: | 216-444 |
| Cow position: | chr21:28428638-28428864 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 217-390 |
| Cow position: | chr21:3629205-3629035 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 65, 55 |
| Conread position: | 221-474 |
| Cow position: | chr21:39429215-39429465 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 224-474 |
| Cow position: | chr21:2366623-2366863 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 0 |
Show alignments to all cow chromosomes.