Cow genome map
Conread name: | mCP1-MI-P-CP1-nwi-c-12-0-UI.s1 |
Conread position: | 25-462 |
Cow position: | chr26:12585272-12584838 (view UCSC Genome Browser custom track) |
Alignm length: | 442 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 146 |
Conread position: | 26-390 |
Cow position: | chr26:1885280-1885645 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 106 |
Conread position: | 26-474 |
Cow position: | chr26:9063354-9063808 (view UCSC Genome Browser custom track) |
Alignm length: | 467 |
Alignm identity: | 320 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 16 |
Conread position: | 30-272 |
Cow position: | chr26:2670546-2670308 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 178 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 39, 75 |
Conread position: | 30-272 |
Cow position: | chr26:20186593-20186812 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 177 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 42, 54 |
Conread position: | 30-335 |
Cow position: | chr26:9841129-9840817 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 221 |
Alignm E-value: | 8e-26 |
Alignm gaps (pig, cow): | 30, 55 |
Conread position: | 30-392 |
Cow position: | chr26:2201801-2202158 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 78 |
Conread position: | 30-398 |
Cow position: | chr26:35191277-35190912 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 141 |
Conread position: | 30-420 |
Cow position: | chr26:3833305-3833692 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 146 |
Conread position: | 30-422 |
Cow position: | chr26:18877078-18877465 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 307 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 8 |
Conread position: | 30-457 |
Cow position: | chr26:9694525-9694103 (view UCSC Genome Browser custom track) |
Alignm length: | 432 |
Alignm identity: | 340 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 133 |
Conread position: | 30-466 |
Cow position: | chr26:10699227-10698810 (view UCSC Genome Browser custom track) |
Alignm length: | 444 |
Alignm identity: | 317 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 186, 46 |
Conread position: | 30-470 |
Cow position: | chr26:13773322-13773751 (view UCSC Genome Browser custom track) |
Alignm length: | 445 |
Alignm identity: | 350 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 130 |
Conread position: | 30-471 |
Cow position: | chr26:12662461-12662041 (view UCSC Genome Browser custom track) |
Alignm length: | 443 |
Alignm identity: | 346 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 112, 15 |
Conread position: | 30-473 |
Cow position: | chr26:386951-387389 (view UCSC Genome Browser custom track) |
Alignm length: | 448 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 141 |
Conread position: | 30-473 |
Cow position: | chr26:1620926-1621358 (view UCSC Genome Browser custom track) |
Alignm length: | 448 |
Alignm identity: | 345 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 85 |
Conread position: | 30-473 |
Cow position: | chr26:3862807-3862368 (view UCSC Genome Browser custom track) |
Alignm length: | 448 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 110 |
Conread position: | 30-474 |
Cow position: | chr26:3027168-3026728 (view UCSC Genome Browser custom track) |
Alignm length: | 449 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 104 |
Conread position: | 30-474 |
Cow position: | chr26:3187030-3187462 (view UCSC Genome Browser custom track) |
Alignm length: | 448 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 79, 37 |
Conread position: | 30-474 |
Cow position: | chr26:3564768-3564330 (view UCSC Genome Browser custom track) |
Alignm length: | 449 |
Alignm identity: | 342 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 141 |
Conread position: | 30-474 |
Cow position: | chr26:7459693-7459255 (view UCSC Genome Browser custom track) |
Alignm length: | 452 |
Alignm identity: | 340 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 90 |
Conread position: | 30-474 |
Cow position: | chr26:7559345-7558906 (view UCSC Genome Browser custom track) |
Alignm length: | 449 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 141 |
Conread position: | 30-474 |
Cow position: | chr26:8084097-8084538 (view UCSC Genome Browser custom track) |
Alignm length: | 449 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 141 |
Conread position: | 30-474 |
Cow position: | chr26:8308493-8308042 (view UCSC Genome Browser custom track) |
Alignm length: | 458 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 60, 101 |
Conread position: | 30-474 |
Cow position: | chr26:8739146-8738705 (view UCSC Genome Browser custom track) |
Alignm length: | 450 |
Alignm identity: | 346 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 141 |
Conread position: | 30-474 |
Cow position: | chr26:8873117-8873557 (view UCSC Genome Browser custom track) |
Alignm length: | 449 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 115 |
Conread position: | 30-474 |
Cow position: | chr26:9100709-9100280 (view UCSC Genome Browser custom track) |
Alignm length: | 450 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 63 |
Conread position: | 30-474 |
Cow position: | chr26:11369966-11370399 (view UCSC Genome Browser custom track) |
Alignm length: | 449 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 130 |
Conread position: | 30-474 |
Cow position: | chr26:13183581-13184022 (view UCSC Genome Browser custom track) |
Alignm length: | 449 |
Alignm identity: | 350 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 141 |
Conread position: | 30-474 |
Cow position: | chr26:14487986-14487553 (view UCSC Genome Browser custom track) |
Alignm length: | 452 |
Alignm identity: | 354 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 82 |
Conread position: | 30-474 |
Cow position: | chr26:17169101-17169534 (view UCSC Genome Browser custom track) |
Alignm length: | 449 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 141 |
Conread position: | 30-474 |
Cow position: | chr26:18857391-18857826 (view UCSC Genome Browser custom track) |
Alignm length: | 449 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 119 |
Conread position: | 30-474 |
Cow position: | chr26:22691661-22692097 (view UCSC Genome Browser custom track) |
Alignm length: | 449 |
Alignm identity: | 346 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 130 |
Conread position: | 30-474 |
Cow position: | chr26:22831765-22831327 (view UCSC Genome Browser custom track) |
Alignm length: | 448 |
Alignm identity: | 346 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 18 |
Conread position: | 30-474 |
Cow position: | chr26:23590966-23591407 (view UCSC Genome Browser custom track) |
Alignm length: | 449 |
Alignm identity: | 345 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 141 |
Conread position: | 30-474 |
Cow position: | chr26:23889683-23890115 (view UCSC Genome Browser custom track) |
Alignm length: | 447 |
Alignm identity: | 346 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 141 |
Conread position: | 30-474 |
Cow position: | chr26:26286130-26286571 (view UCSC Genome Browser custom track) |
Alignm length: | 450 |
Alignm identity: | 345 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 142 |
Conread position: | 30-474 |
Cow position: | chr26:27987318-27986894 (view UCSC Genome Browser custom track) |
Alignm length: | 451 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 115 |
Conread position: | 30-474 |
Cow position: | chr26:28706787-28706351 (view UCSC Genome Browser custom track) |
Alignm length: | 449 |
Alignm identity: | 347 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 82 |
Conread position: | 30-474 |
Cow position: | chr26:29433503-29433944 (view UCSC Genome Browser custom track) |
Alignm length: | 449 |
Alignm identity: | 349 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 141 |
Conread position: | 30-474 |
Cow position: | chr26:30594358-30593928 (view UCSC Genome Browser custom track) |
Alignm length: | 449 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 141 |
Conread position: | 30-474 |
Cow position: | chr26:30725647-30725197 (view UCSC Genome Browser custom track) |
Alignm length: | 457 |
Alignm identity: | 354 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 131 |
Conread position: | 30-474 |
Cow position: | chr26:35423770-35424209 (view UCSC Genome Browser custom track) |
Alignm length: | 448 |
Alignm identity: | 347 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 187, 72 |
Conread position: | 31-213 |
Cow position: | chr26:4548880-4549060 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 143 |
Alignm E-value: | 5e-32 |
Alignm gaps (pig, cow): | 46, 106 |
Conread position: | 31-390 |
Cow position: | chr26:34015115-34015466 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 184, 35 |
Conread position: | 31-474 |
Cow position: | chr26:4324442-4324007 (view UCSC Genome Browser custom track) |
Alignm length: | 450 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 146 |
Conread position: | 32-473 |
Cow position: | chr26:21858870-21859293 (view UCSC Genome Browser custom track) |
Alignm length: | 448 |
Alignm identity: | 318 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 10 |
Conread position: | 33-396 |
Cow position: | chr26:11269496-11269846 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 59 |
Conread position: | 33-428 |
Cow position: | chr26:25340662-25340270 (view UCSC Genome Browser custom track) |
Alignm length: | 405 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 46 |
Conread position: | 33-462 |
Cow position: | chr26:15199302-15199709 (view UCSC Genome Browser custom track) |
Alignm length: | 435 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 59 |
Conread position: | 33-474 |
Cow position: | chr26:20218527-20218953 (view UCSC Genome Browser custom track) |
Alignm length: | 443 |
Alignm identity: | 332 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 60 |
Conread position: | 33-474 |
Cow position: | chr26:30786201-30786638 (view UCSC Genome Browser custom track) |
Alignm length: | 447 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 49 |
Conread position: | 35-474 |
Cow position: | chr26:15145770-15146206 (view UCSC Genome Browser custom track) |
Alignm length: | 445 |
Alignm identity: | 342 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 136 |
Conread position: | 35-474 |
Cow position: | chr26:20255900-20256330 (view UCSC Genome Browser custom track) |
Alignm length: | 445 |
Alignm identity: | 361 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 141 |
Conread position: | 37-334 |
Cow position: | chr26:10490522-10490812 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 205 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 179, 88 |
Conread position: | 41-299 |
Cow position: | chr26:6082842-6082588 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 174 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 17, 89 |
Conread position: | 43-470 |
Cow position: | chr26:30586071-30585652 (view UCSC Genome Browser custom track) |
Alignm length: | 432 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 58 |
Conread position: | 44-390 |
Cow position: | chr26:9835756-9836099 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 127 |
Conread position: | 44-474 |
Cow position: | chr26:7677019-7677446 (view UCSC Genome Browser custom track) |
Alignm length: | 435 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 127 |
Conread position: | 50-472 |
Cow position: | chr26:11362390-11361990 (view UCSC Genome Browser custom track) |
Alignm length: | 425 |
Alignm identity: | 315 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 63 |
Conread position: | 61-474 |
Cow position: | chr26:8810159-8810567 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 324 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 14 |
Conread position: | 67-367 |
Cow position: | chr26:614882-614590 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 189 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 16, 26 |
Conread position: | 68-474 |
Cow position: | chr26:3097339-3096937 (view UCSC Genome Browser custom track) |
Alignm length: | 410 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 147, 102 |
Conread position: | 68-474 |
Cow position: | chr26:11537135-11537537 (view UCSC Genome Browser custom track) |
Alignm length: | 410 |
Alignm identity: | 321 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 147, 102 |
Conread position: | 82-474 |
Cow position: | chr26:15558810-15559198 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 90 |
Conread position: | 90-474 |
Cow position: | chr26:6836951-6837317 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 87 |
Conread position: | 91-397 |
Cow position: | chr26:16905249-16905556 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 219 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 127, 80 |
Conread position: | 92-443 |
Cow position: | chr26:19536398-19536730 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 256 |
Alignm E-value: | 5.00264e-43 |
Alignm gaps (pig, cow): | 124, 24 |
Conread position: | 93-420 |
Cow position: | chr26:16719809-16720135 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 112, 77 |
Conread position: | 97-456 |
Cow position: | chr26:13976766-13976427 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 132, 21 |
Conread position: | 98-474 |
Cow position: | chr26:21538733-21539105 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 287 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 119, 72 |
Conread position: | 104-473 |
Cow position: | chr26:3756550-3756929 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 287 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 112, 66 |
Conread position: | 105-470 |
Cow position: | chr26:30653026-30652671 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 270 |
Alignm E-value: | 6.02558e-44 |
Alignm gaps (pig, cow): | 110, 65 |
Conread position: | 109-470 |
Cow position: | chr26:14897439-14897796 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 287 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 108, 61 |
Conread position: | 110-390 |
Cow position: | chr26:8653772-8653502 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 206 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 30, 46 |
Conread position: | 129-474 |
Cow position: | chr26:23600658-23600323 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 86, 46 |
Conread position: | 131-467 |
Cow position: | chr26:756001-755671 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 84, 44 |
Conread position: | 132-473 |
Cow position: | chr26:799170-798835 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 89, 46 |
Conread position: | 138-474 |
Cow position: | chr26:13556830-13556504 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 0 |
Conread position: | 143-474 |
Cow position: | chr26:14292009-14292348 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 205 |
Conread position: | 146-471 |
Cow position: | chr26:9867956-9867657 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 240 |
Alignm E-value: | 4.99983e-42 |
Alignm gaps (pig, cow): | 70, 26 |
Conread position: | 149-474 |
Cow position: | chr26:33253099-33252775 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 41 |
Conread position: | 163-443 |
Cow position: | chr26:11335464-11335764 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 231 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 145 |
Conread position: | 170-474 |
Cow position: | chr26:18918914-18918607 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 230 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 105 |
Conread position: | 195-474 |
Cow position: | chr26:30569699-30569418 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 238 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 83 |
Conread position: | 205-474 |
Cow position: | chr26:32671304-32671028 (view UCSC Genome Browser custom track) |
Alignm length: | 283 |
Alignm identity: | 216 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 148 |
Conread position: | 216-435 |
Cow position: | chr26:2988526-2988319 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 169 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 216-474 |
Cow position: | chr26:19347972-19347714 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 204 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 173, 43 |
Conread position: | 221-389 |
Cow position: | chr26:21247233-21247399 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 133 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 67, 0 |
Show alignments to all cow chromosomes.