Cow genome map

Conread name: mCP1-MI-P-CP1-nwi-c-12-0-UI.s1

Conread position: 24-444
Cow position:
Alignm length: 425
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 135

Conread position: 25-474
Cow position:
Alignm length: 457
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 137

Conread position: 25-474
Cow position:
Alignm length: 461
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 67

Conread position: 30-168
Cow position:
Alignm length: 141
Alignm identity: 110
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 41, 0

Conread position: 30-257
Cow position:
Alignm length: 245
Alignm identity: 191
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 43, 12

Conread position: 30-276
Cow position:
Alignm length: 251
Alignm identity: 195
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 40, 76

Conread position: 30-279
Cow position:
Alignm length: 251
Alignm identity: 184
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 171, 52

Conread position: 30-306
Cow position:
Alignm length: 282
Alignm identity: 198
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 33, 52

Conread position: 30-307
Cow position:
Alignm length: 281
Alignm identity: 194
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 41, 55

Conread position: 30-339
Cow position:
Alignm length: 321
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 252

Conread position: 30-339
Cow position:
Alignm length: 314
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 130

Conread position: 30-390
Cow position:
Alignm length: 365
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 125

Conread position: 30-390
Cow position:
Alignm length: 366
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 141

Conread position: 30-396
Cow position:
Alignm length: 372
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 141

Conread position: 30-407
Cow position:
Alignm length: 383
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 141

Conread position: 30-408
Cow position:
Alignm length: 384
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 27

Conread position: 30-435
Cow position:
Alignm length: 410
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 142

Conread position: 30-436
Cow position:
Alignm length: 412
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 82

Conread position: 30-443
Cow position:
Alignm length: 418
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 141

Conread position: 30-444
Cow position:
Alignm length: 419
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 19

Conread position: 30-445
Cow position:
Alignm length: 421
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 51

Conread position: 30-465
Cow position:
Alignm length: 441
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 143

Conread position: 30-470
Cow position:
Alignm length: 455
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 133

Conread position: 30-473
Cow position:
Alignm length: 448
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 141

Conread position: 30-473
Cow position:
Alignm length: 455
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 12

Conread position: 30-474
Cow position:
Alignm length: 446
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 98

Conread position: 30-474
Cow position:
Alignm length: 449
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 54

Conread position: 30-474
Cow position:
Alignm length: 450
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 96

Conread position: 30-474
Cow position:
Alignm length: 451
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 143

Conread position: 30-474
Cow position:
Alignm length: 451
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 34

Conread position: 30-474
Cow position:
Alignm length: 449
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 141

Conread position: 30-474
Cow position:
Alignm length: 449
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 141

Conread position: 30-474
Cow position:
Alignm length: 459
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 117

Conread position: 30-474
Cow position:
Alignm length: 449
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 146

Conread position: 30-474
Cow position:
Alignm length: 449
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 130

Conread position: 30-474
Cow position:
Alignm length: 449
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 142

Conread position: 30-474
Cow position:
Alignm length: 449
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 146

Conread position: 30-474
Cow position:
Alignm length: 451
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 141

Conread position: 30-474
Cow position:
Alignm length: 449
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 130

Conread position: 30-474
Cow position:
Alignm length: 449
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 107

Conread position: 30-474
Cow position:
Alignm length: 449
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 141

Conread position: 30-474
Cow position:
Alignm length: 450
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 51

Conread position: 30-474
Cow position:
Alignm length: 449
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 141

Conread position: 30-474
Cow position:
Alignm length: 450
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 43

Conread position: 30-474
Cow position:
Alignm length: 449
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 66

Conread position: 30-474
Cow position:
Alignm length: 449
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 141

Conread position: 30-474
Cow position:
Alignm length: 454
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 67

Conread position: 30-474
Cow position:
Alignm length: 449
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 141

Conread position: 30-474
Cow position:
Alignm length: 449
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 141

Conread position: 30-474
Cow position:
Alignm length: 449
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 141

Conread position: 30-474
Cow position:
Alignm length: 450
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 30

Conread position: 30-474
Cow position:
Alignm length: 450
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 142

Conread position: 30-474
Cow position:
Alignm length: 450
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 131

Conread position: 30-474
Cow position:
Alignm length: 453
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 76

Conread position: 30-474
Cow position:
Alignm length: 445
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 30-474
Cow position:
Alignm length: 449
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 141

Conread position: 30-474
Cow position:
Alignm length: 449
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 130

Conread position: 30-474
Cow position:
Alignm length: 449
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 130

Conread position: 31-276
Cow position:
Alignm length: 252
Alignm identity: 188
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 22, 48

Conread position: 31-459
Cow position:
Alignm length: 442
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 31

Conread position: 31-470
Cow position:
Alignm length: 442
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 7

Conread position: 31-473
Cow position:
Alignm length: 463
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 72

Conread position: 31-474
Cow position:
Alignm length: 451
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 47

Conread position: 31-474
Cow position:
Alignm length: 449
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 108

Conread position: 31-474
Cow position:
Alignm length: 454
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 59

Conread position: 31-474
Cow position:
Alignm length: 445
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 140

Conread position: 33-282
Cow position:
Alignm length: 254
Alignm identity: 187
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 36, 138

Conread position: 33-387
Cow position:
Alignm length: 359
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 142

Conread position: 33-471
Cow position:
Alignm length: 442
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 85

Conread position: 33-474
Cow position:
Alignm length: 446
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 138

Conread position: 33-474
Cow position:
Alignm length: 450
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 139

Conread position: 34-414
Cow position:
Alignm length: 384
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 48

Conread position: 35-474
Cow position:
Alignm length: 450
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 26

Conread position: 40-283
Cow position:
Alignm length: 248
Alignm identity: 171
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 181, 46

Conread position: 42-473
Cow position:
Alignm length: 452
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 135

Conread position: 46-474
Cow position:
Alignm length: 433
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 9

Conread position: 48-474
Cow position:
Alignm length: 432
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 91

Conread position: 58-474
Cow position:
Alignm length: 420
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 53

Conread position: 62-474
Cow position:
Alignm length: 420
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 43

Conread position: 65-470
Cow position:
Alignm length: 410
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 105

Conread position: 68-301
Cow position:
Alignm length: 237
Alignm identity: 177
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 147, 102

Conread position: 73-431
Cow position:
Alignm length: 359
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 0

Conread position: 77-455
Cow position:
Alignm length: 383
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 24

Conread position: 78-308
Cow position:
Alignm length: 237
Alignm identity: 165
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 39, 98

Conread position: 81-336
Cow position:
Alignm length: 259
Alignm identity: 179
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 144, 94

Conread position: 85-474
Cow position:
Alignm length: 397
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 85

Conread position: 91-458
Cow position:
Alignm length: 371
Alignm identity: 249
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 125, 15

Conread position: 92-471
Cow position:
Alignm length: 386
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 46

Conread position: 92-474
Cow position:
Alignm length: 394
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 78

Conread position: 92-474
Cow position:
Alignm length: 386
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 26

Conread position: 94-474
Cow position:
Alignm length: 387
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 84

Conread position: 95-474
Cow position:
Alignm length: 384
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 21

Conread position: 95-474
Cow position:
Alignm length: 388
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 75

Conread position: 97-348
Cow position:
Alignm length: 256
Alignm identity: 178
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 40, 10

Conread position: 97-390
Cow position:
Alignm length: 298
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 25

Conread position: 97-474
Cow position:
Alignm length: 381
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 73

Conread position: 101-346
Cow position:
Alignm length: 249
Alignm identity: 170
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 121, 74

Conread position: 101-474
Cow position:
Alignm length: 378
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 69

Conread position: 112-467
Cow position:
Alignm length: 358
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 53

Conread position: 114-380
Cow position:
Alignm length: 271
Alignm identity: 192
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 106, 66

Conread position: 114-474
Cow position:
Alignm length: 364
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 56

Conread position: 116-474
Cow position:
Alignm length: 363
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 55

Conread position: 117-474
Cow position:
Alignm length: 362
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 53

Conread position: 121-474
Cow position:
Alignm length: 357
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 54

Conread position: 143-474
Cow position:
Alignm length: 335
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 32

Conread position: 144-474
Cow position:
Alignm length: 335
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 26

Conread position: 151-422
Cow position:
Alignm length: 276
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 117

Conread position: 151-474
Cow position:
Alignm length: 326
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 139

Conread position: 167-474
Cow position:
Alignm length: 311
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 124

Conread position: 170-470
Cow position:
Alignm length: 306
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 110

Conread position: 171-474
Cow position:
Alignm length: 307
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 10

Conread position: 174-474
Cow position:
Alignm length: 312
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 89

Conread position: 210-474
Cow position:
Alignm length: 265
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 215-466
Cow position:
Alignm length: 258
Alignm identity: 192
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 67, 58

Conread position: 220-474
Cow position:
Alignm length: 258
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 55

Conread position: 221-474
Cow position:
Alignm length: 254
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 0

Conread position: 222-408
Cow position:
Alignm length: 187
Alignm identity: 135
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 66, 0

Conread position: 224-474
Cow position:
Alignm length: 251
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 224-474
Cow position:
Alignm length: 256
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 117

Conread position: 226-467
Cow position:
Alignm length: 257
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 147

Conread position: 233-474
Cow position:
Alignm length: 245
Alignm identity: 172
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 44, 56

Show alignments to all cow chromosomes.