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Cow genome map

           
Conread name:
           
mCP1-MI-P-CP1-nwt-d-02-0-UI.s1
        

               
Conread position:
               
45-352
               

               
Cow position:
               
chr13:45725610-45725945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
103, 7
               

               
Conread position:
               
51-352
               

               
Cow position:
               
chr13:15257621-15257319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
68, 102
               

               
Conread position:
               
53-356
               

               
Cow position:
               
chr13:18058507-18058192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
29, 18
               

               
Conread position:
               
56-356
               

               
Cow position:
               
chr13:20271483-20271173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
70, 35
               

               
Conread position:
               
68-356
               

               
Cow position:
               
chr13:17159124-17158821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
61, 95
               

               
Conread position:
               
72-296
               

               
Cow position:
               
chr13:28440771-28440546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
54, 82
               

               
Conread position:
               
72-356
               

               
Cow position:
               
chr13:15868874-15869176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
54, 18
               

               
Conread position:
               
73-355
               

               
Cow position:
               
chr13:15162873-15162599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
55, 85
               

               
Conread position:
               
73-368
               

               
Cow position:
               
chr13:28536560-28536261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
36, 90
               

               
Conread position:
               
74-276
               

               
Cow position:
               
chr13:5992611-5992819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
55, 18
               

               
Conread position:
               
74-314
               

               
Cow position:
               
chr13:6486485-6486241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
27, 82
               

               
Conread position:
               
74-352
               

               
Cow position:
               
chr13:49023103-49022816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
21, 87
               

               
Conread position:
               
74-356
               

               
Cow position:
               
chr13:55674443-55674155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
55, 25
               

               
Conread position:
               
75-320
               

               
Cow position:
               
chr13:27180802-27181057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
27, 10
               

               
Conread position:
               
75-355
               

               
Cow position:
               
chr13:25504300-25504586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
63, 109
               

               
Conread position:
               
75-356
               

               
Cow position:
               
chr13:48252203-48251932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
53, 41
               

               
Conread position:
               
76-258
               

               
Cow position:
               
chr13:32914496-32914309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
51, 86
               

               
Conread position:
               
76-260
               

               
Cow position:
               
chr13:6091634-6091459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
22, 43
               

               
Conread position:
               
76-349
               

               
Cow position:
               
chr13:20880061-20879777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
21, 86
               

               
Conread position:
               
77-247
               

               
Cow position:
               
chr13:24004358-24004196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
77-309
               

               
Cow position:
               
chr13:39398398-39398658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
49, 8
               

               
Conread position:
               
77-347
               

               
Cow position:
               
chr13:20534668-20534939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
51, 24
               

               
Conread position:
               
77-354
               

               
Cow position:
               
chr13:32282893-32283178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
36, 81
               

               
Conread position:
               
77-356
               

               
Cow position:
               
chr13:19278865-19279150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
71, 24
               

               
Conread position:
               
77-356
               

               
Cow position:
               
chr13:55161973-55162265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
16, 81
               

               
Conread position:
               
78-289
               

               
Cow position:
               
chr13:47643816-47644043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
25, 76
               

               
Conread position:
               
79-260
               

               
Cow position:
               
chr13:5079609-5079415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
45, 28
               

               
Conread position:
               
79-260
               

               
Cow position:
               
chr13:32186034-32186229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
47, 82
               

               
Conread position:
               
79-288
               

               
Cow position:
               
chr13:20042491-20042281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
25, 77
               

               
Conread position:
               
79-293
               

               
Cow position:
               
chr13:30148784-30148574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
50, 20
               

               
Conread position:
               
79-353
               

               
Cow position:
               
chr13:18989494-18989765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
104, 20
               

               
Conread position:
               
79-356
               

               
Cow position:
               
chr13:9266080-9265779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
16, 82
               

               
Conread position:
               
79-356
               

               
Cow position:
               
chr13:18994897-18995180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
38, 22
               

               
Conread position:
               
80-270
               

               
Cow position:
               
chr13:3153520-3153709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
34, 77
               

               
Conread position:
               
80-309
               

               
Cow position:
               
chr13:50768360-50768601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
22, 82
               

               
Conread position:
               
80-318
               

               
Cow position:
               
chr13:15996803-15997048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
18, 81
               

               
Conread position:
               
80-318
               

               
Cow position:
               
chr13:45352796-45353045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
21, 82
               

               
Conread position:
               
80-349
               

               
Cow position:
               
chr13:14927024-14927303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
65, 21
               

               
Conread position:
               
80-352
               

               
Cow position:
               
chr13:620473-620203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
37, 75
               

               
Conread position:
               
80-353
               

               
Cow position:
               
chr13:56035089-56034808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
15, 67
               

               
Conread position:
               
80-354
               

               
Cow position:
               
chr13:57475647-57475365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
46, 81
               

               
Conread position:
               
80-355
               

               
Cow position:
               
chr13:6189829-6189557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
75, 21
               

               
Conread position:
               
80-356
               

               
Cow position:
               
chr13:5758561-5758287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
46, 21
               

               
Conread position:
               
80-356
               

               
Cow position:
               
chr13:9142042-9142338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
19, 83
               

               
Conread position:
               
80-356
               

               
Cow position:
               
chr13:12925554-12925827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
77, 21
               

               
Conread position:
               
80-356
               

               
Cow position:
               
chr13:19240209-19240489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
187, 48
               

               
Conread position:
               
80-360
               

               
Cow position:
               
chr13:52641181-52640893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
49, 79
               

               
Conread position:
               
81-250
               

               
Cow position:
               
chr13:34694231-34694072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
81-259
               

               
Cow position:
               
chr13:28081487-28081670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
45, 79
               

               
Conread position:
               
81-273
               

               
Cow position:
               
chr13:21024753-21024949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
21, 80
               

               
Conread position:
               
81-322
               

               
Cow position:
               
chr13:55765406-55765159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
24, 80
               

               
Conread position:
               
81-327
               

               
Cow position:
               
chr13:28071646-28071896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
13, 78
               

               
Conread position:
               
81-351
               

               
Cow position:
               
chr13:38035608-38035886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
15, 58
               

               
Conread position:
               
81-352
               

               
Cow position:
               
chr13:54128824-54128544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
48, 18
               

               
Conread position:
               
81-354
               

               
Cow position:
               
chr13:19188085-19188352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
180, 48
               

               
Conread position:
               
81-354
               

               
Cow position:
               
chr13:20137594-20137876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
36, 26
               

               
Conread position:
               
81-356
               

               
Cow position:
               
chr13:19582310-19582033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
44, 88
               

               
Conread position:
               
81-356
               

               
Cow position:
               
chr13:20401226-20400938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
11, 146
               

               
Conread position:
               
81-356
               

               
Cow position:
               
chr13:46111739-46112020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
67, 50
               

               
Conread position:
               
81-356
               

               
Cow position:
               
chr13:51940515-51940790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
16, 56
               

               
Conread position:
               
82-296
               

               
Cow position:
               
chr13:54582646-54582864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
58, 66
               

               
Conread position:
               
82-314
               

               
Cow position:
               
chr13:44003476-44003709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
45, 70
               

               
Conread position:
               
82-318
               

               
Cow position:
               
chr13:1462516-1462283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
47, 16
               

               
Conread position:
               
82-318
               

               
Cow position:
               
chr13:25941490-25941250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
43, 74
               

               
Conread position:
               
82-319
               

               
Cow position:
               
chr13:40541340-40541090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
10, 81
               

               
Conread position:
               
82-326
               

               
Cow position:
               
chr13:52477872-52477627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
44, 19
               

               
Conread position:
               
82-353
               

               
Cow position:
               
chr13:15041703-15041423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
47, 80
               

               
Conread position:
               
82-353
               

               
Cow position:
               
chr13:25380718-25381011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
44, 18
               

               
Conread position:
               
82-354
               

               
Cow position:
               
chr13:26698721-26698446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
25, 75
               

               
Conread position:
               
82-356
               

               
Cow position:
               
chr13:17745030-17745299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
70, 47
               

               
Conread position:
               
82-356
               

               
Cow position:
               
chr13:49795810-49796070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
44, 78
               

               
Conread position:
               
82-356
               

               
Cow position:
               
chr13:52749691-52749424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
48, 73
               

               
Conread position:
               
82-356
               

               
Cow position:
               
chr13:54389235-54388965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
171, 38
               

               
Conread position:
               
82-362
               

               
Cow position:
               
chr13:32017745-32017466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
20, 79
               

               
Conread position:
               
83-244
               

               
Cow position:
               
chr13:45142163-45141989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
42, 99
               

               
Conread position:
               
83-355
               

               
Cow position:
               
chr13:9975295-9975023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
107, 46
               

               
Conread position:
               
84-318
               

               
Cow position:
               
chr13:47676166-47675921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
14, 86
               

               
Conread position:
               
85-260
               

               
Cow position:
               
chr13:53619775-53619953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
41, 75
               

               
Conread position:
               
85-276
               

               
Cow position:
               
chr13:17135441-17135248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
16, 75
               

               
Conread position:
               
85-285
               

               
Cow position:
               
chr13:24009682-24009479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
11, 65
               

               
Conread position:
               
85-293
               

               
Cow position:
               
chr13:24094542-24094328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
40, 73
               

               
Conread position:
               
85-311
               

               
Cow position:
               
chr13:8699965-8699730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
42, 14
               

               
Conread position:
               
85-318
               

               
Cow position:
               
chr13:3209547-3209307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
79, 16
               

               
Conread position:
               
85-347
               

               
Cow position:
               
chr13:585099-584827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
41, 75
               

               
Conread position:
               
85-350
               

               
Cow position:
               
chr13:37593170-37592896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
44, 16
               

               
Conread position:
               
85-351
               

               
Cow position:
               
chr13:8232795-8233044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
168, 15
               

               
Conread position:
               
85-351
               

               
Cow position:
               
chr13:43595329-43595060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
44, 16
               

               
Conread position:
               
85-353
               

               
Cow position:
               
chr13:10989298-10989025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
41, 16
               

               
Conread position:
               
85-353
               

               
Cow position:
               
chr13:12449206-12448944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
172, 64
               

               
Conread position:
               
85-353
               

               
Cow position:
               
chr13:19223426-19223696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
39, 73
               

               
Conread position:
               
85-354
               

               
Cow position:
               
chr13:52893923-52894195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
44, 72
               

               
Conread position:
               
85-355
               

               
Cow position:
               
chr13:151744-152013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
7, 71
               

               
Conread position:
               
85-355
               

               
Cow position:
               
chr13:25537412-25537679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
167, 44
               

               
Conread position:
               
85-356
               

               
Cow position:
               
chr13:21235892-21235632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
69, 16
               

               
Conread position:
               
85-356
               

               
Cow position:
               
chr13:25695992-25695717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
58, 44
               

               
Conread position:
               
86-250
               

               
Cow position:
               
chr13:42613866-42614023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
12, 64
               

               
Conread position:
               
86-308
               

               
Cow position:
               
chr13:10522715-10522937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
39, 74
               

               
Conread position:
               
86-352
               

               
Cow position:
               
chr13:16014581-16014861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
40, 14
               

               
Conread position:
               
86-353
               

               
Cow position:
               
chr13:16038508-16038242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
10, 54
               

               
Conread position:
               
86-354
               

               
Cow position:
               
chr13:6079627-6079367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
166, 43
               

               
Conread position:
               
88-273
               

               
Cow position:
               
chr13:2907084-2907264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
102, 63
               

               
Conread position:
               
88-289
               

               
Cow position:
               
chr13:53865412-53865621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
17, 70
               

               
Conread position:
               
88-321
               

               
Cow position:
               
chr13:13775475-13775227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
36, 72
               

               
Conread position:
               
88-353
               

               
Cow position:
               
chr13:42672654-42672371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
9, 74
               

               
Conread position:
               
89-295
               

               
Cow position:
               
chr13:43788069-43787846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
37, 71
               

               
Conread position:
               
89-295
               

               
Cow position:
               
chr13:43839908-43839685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
37, 71
               

               
Conread position:
               
89-351
               

               
Cow position:
               
chr13:15195422-15195161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
64, 40
               

               
Conread position:
               
90-354
               

               
Cow position:
               
chr13:54701961-54702239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
36, 66
               

               
Conread position:
               
90-356
               

               
Cow position:
               
chr13:14063741-14063465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
36, 70
               

               
Conread position:
               
91-323
               

               
Cow position:
               
chr13:17813252-17813488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
57, 48
               

               
Conread position:
               
91-350
               

               
Cow position:
               
chr13:7149718-7149465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
162, 60
               

               
Conread position:
               
91-356
               

               
Cow position:
               
chr13:17622074-17622335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
80, 24
               

               
Conread position:
               
91-356
               

               
Cow position:
               
chr13:18166513-18166787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
35, 69
               

               
Conread position:
               
92-260
               

               
Cow position:
               
chr13:9327310-9327138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
37, 66
               

               
Conread position:
               
92-264
               

               
Cow position:
               
chr13:5930529-5930352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
34, 66
               

               
Conread position:
               
92-311
               

               
Cow position:
               
chr13:52881102-52880861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
34, 68
               

               
Conread position:
               
92-317
               

               
Cow position:
               
chr13:6183649-6183407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
34, 67
               

               
Conread position:
               
92-317
               

               
Cow position:
               
chr13:54145699-54145463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
44, 56
               

               
Conread position:
               
92-318
               

               
Cow position:
               
chr13:21981188-21980962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
32, 69
               

               
Conread position:
               
92-329
               

               
Cow position:
               
chr13:58662024-58662268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
36, 68
               

               
Conread position:
               
92-352
               

               
Cow position:
               
chr13:24753675-24753932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
169, 39
               

               
Conread position:
               
92-353
               

               
Cow position:
               
chr13:11060756-11061034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
34, 68
               

               
Conread position:
               
92-354
               

               
Cow position:
               
chr13:11201820-11202081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
34, 68
               

               
Conread position:
               
92-354
               

               
Cow position:
               
chr13:16020641-16020904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
71, 37
               

               
Conread position:
               
92-354
               

               
Cow position:
               
chr13:24715031-24715295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
167, 37
               

               
Conread position:
               
92-354
               

               
Cow position:
               
chr13:35526412-35526152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
34, 64
               

               
Conread position:
               
92-354
               

               
Cow position:
               
chr13:41806558-41806827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
37, 64
               

               
Conread position:
               
92-356
               

               
Cow position:
               
chr13:311214-311484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
34, 68
               

               
Conread position:
               
92-356
               

               
Cow position:
               
chr13:3315904-3315624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
35, 65
               

               
Conread position:
               
92-356
               

               
Cow position:
               
chr13:6973944-6974214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
37, 68
               

               
Conread position:
               
92-356
               

               
Cow position:
               
chr13:9899928-9900202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
35, 67
               

               
Conread position:
               
92-356
               

               
Cow position:
               
chr13:14575997-14576261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
129, 92
               

               
Conread position:
               
92-356
               

               
Cow position:
               
chr13:19393078-19393348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
34, 64
               

               
Conread position:
               
92-356
               

               
Cow position:
               
chr13:35659536-35659807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
44, 224
               

               
Conread position:
               
92-356
               

               
Cow position:
               
chr13:44201791-44202054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
98, 82
               

               
Conread position:
               
92-367
               

               
Cow position:
               
chr13:37621593-37621296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
33, 68
               

               
Conread position:
               
93-271
               

               
Cow position:
               
chr13:5714504-5714315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
26, 67
               

               
Conread position:
               
93-282
               

               
Cow position:
               
chr13:18215141-18215337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
36, 65
               

               
Conread position:
               
93-293
               

               
Cow position:
               
chr13:50623028-50622823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
35, 99
               

               
Conread position:
               
93-308
               

               
Cow position:
               
chr13:54652526-54652325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
182, 58
               

               
Conread position:
               
93-311
               

               
Cow position:
               
chr13:15144048-15143836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
90, 36
               

               
Conread position:
               
93-318
               

               
Cow position:
               
chr13:7046663-7046884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
160, 36
               

               
Conread position:
               
93-356
               

               
Cow position:
               
chr13:1568717-1568977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
68, 36
               

               
Conread position:
               
93-356
               

               
Cow position:
               
chr13:4552609-4552857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
36, 20
               

               
Conread position:
               
93-356
               

               
Cow position:
               
chr13:18491390-18491656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
164, 56
               

               
Conread position:
               
93-356
               

               
Cow position:
               
chr13:21170312-21170583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
29, 9
               

               
Conread position:
               
93-356
               

               
Cow position:
               
chr13:25817312-25817582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
99, 79
               

               
Conread position:
               
93-356
               

               
Cow position:
               
chr13:40154956-40154682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
32, 15
               

               
Conread position:
               
93-356
               

               
Cow position:
               
chr13:52055810-52055540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
35, 54
               

               
Conread position:
               
94-264
               

               
Cow position:
               
chr13:33854897-33854728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
32, 63
               

               
Conread position:
               
94-296
               

               
Cow position:
               
chr13:17977126-17977342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
35, 66
               

               
Conread position:
               
94-322
               

               
Cow position:
               
chr13:47243768-47243539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
22, 64
               

               
Conread position:
               
94-352
               

               
Cow position:
               
chr13:46515843-46516110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
32, 63
               

               
Conread position:
               
94-355
               

               
Cow position:
               
chr13:1147367-1147098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
35, 48
               

               
Conread position:
               
94-356
               

               
Cow position:
               
chr13:23961023-23960759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
35, 61
               

               
Conread position:
               
94-356
               

               
Cow position:
               
chr13:42200404-42200673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
30, 64
               

               
Conread position:
               
94-356
               

               
Cow position:
               
chr13:62007891-62008166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
95, 79
               

               
Conread position:
               
95-356
               

               
Cow position:
               
chr13:11231512-11231254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
31, 66
               

               
Conread position:
               
95-356
               

               
Cow position:
               
chr13:15193103-15192836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
30, 94
               

               
Conread position:
               
95-356
               

               
Cow position:
               
chr13:21136127-21135846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
29, 65
               

               
Conread position:
               
95-356
               

               
Cow position:
               
chr13:21275641-21275911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
34, 64
               

               
Conread position:
               
95-356
               

               
Cow position:
               
chr13:26480418-26480159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
31, 62
               

               
Conread position:
               
96-315
               

               
Cow position:
               
chr13:9707961-9707738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
49, 35
               

               
Conread position:
               
96-353
               

               
Cow position:
               
chr13:23512166-23512417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
165, 33
               

               
Conread position:
               
96-356
               

               
Cow position:
               
chr13:2773901-2774181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
30, 64
               

               
Conread position:
               
96-356
               

               
Cow position:
               
chr13:7076026-7076312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
32, 64
               

               
Conread position:
               
96-356
               

               
Cow position:
               
chr13:21288299-21288032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
30, 64
               

               
Conread position:
               
96-356
               

               
Cow position:
               
chr13:34261021-34261284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
56, 33
               

               
Conread position:
               
97-250
               

               
Cow position:
               
chr13:42203818-42203964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
97-273
               

               
Cow position:
               
chr13:57929776-57929605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
154, 54
               

               
Conread position:
               
97-293
               

               
Cow position:
               
chr13:28439203-28439398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
163, 54
               

               
Conread position:
               
97-318
               

               
Cow position:
               
chr13:49204799-49205012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
29, 49
               

               
Conread position:
               
98-318
               

               
Cow position:
               
chr13:42640168-42640396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
58, 191
               

               
Conread position:
               
98-354
               

               
Cow position:
               
chr13:17350131-17350405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
31, 83
               

               
Conread position:
               
101-260
               

               
Cow position:
               
chr13:3278171-3278020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
101-260
               

               
Cow position:
               
chr13:46298963-46298807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
28, 52
               

               
Conread position:
               
101-299
               

               
Cow position:
               
chr13:29707442-29707648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
91, 50
               

               
Conread position:
               
101-312
               

               
Cow position:
               
chr13:16908004-16908225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
25, 59
               

               
Conread position:
               
101-321
               

               
Cow position:
               
chr13:19750488-19750732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
25, 156
               

               
Conread position:
               
101-338
               

               
Cow position:
               
chr13:41157188-41157440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
25, 59
               

               
Conread position:
               
101-354
               

               
Cow position:
               
chr13:4665059-4664814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
171, 72
               

               
Conread position:
               
101-356
               

               
Cow position:
               
chr13:20784385-20784648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
25, 59
               

               
Conread position:
               
102-355
               

               
Cow position:
               
chr13:34729049-34728789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
25, 56
               

               
Conread position:
               
102-356
               

               
Cow position:
               
chr13:5005774-5006046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
24, 155
               

               
Conread position:
               
105-278
               

               
Cow position:
               
chr13:9492571-9492738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
21, 52
               

               
Conread position:
               
111-318
               

               
Cow position:
               
chr13:16160230-16160431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
146, 40
               

               
Conread position:
               
117-350
               

               
Cow position:
               
chr13:43919451-43919214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
11, 35
               

               
Conread position:
               
125-297
               

               
Cow position:
               
chr13:37803703-37803885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
48, 26
               

               
Conread position:
               
125-351
               

               
Cow position:
               
chr13:49823847-49824075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
133, 26
               

               
Conread position:
               
125-352
               

               
Cow position:
               
chr13:20288162-20288380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
138, 26
               

               
Conread position:
               
125-352
               

               
Cow position:
               
chr13:26261968-26261749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
127, 26
               

               
Conread position:
               
125-356
               

               
Cow position:
               
chr13:15289095-15288869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
137, 26
               

               
Conread position:
               
125-356
               

               
Cow position:
               
chr13:18197784-18197553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
134, 26
               

               
Conread position:
               
125-356
               

               
Cow position:
               
chr13:20666562-20666331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
140, 26
               

               
Conread position:
               
125-356
               

               
Cow position:
               
chr13:37521925-37521690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
9, 29
               

               
Conread position:
               
125-356
               

               
Cow position:
               
chr13:45023399-45023158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
48, 26
               

               
Conread position:
               
126-273
               

               
Cow position:
               
chr13:16834711-16834567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
47, 25
               

               
Conread position:
               
126-307
               

               
Cow position:
               
chr13:27419267-27419080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
33, 22
               

               
Conread position:
               
126-314
               

               
Cow position:
               
chr13:7104480-7104664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
126, 26
               

               
Conread position:
               
126-323
               

               
Cow position:
               
chr13:56958802-56958987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
142, 25
               

               
Conread position:
               
126-331
               

               
Cow position:
               
chr13:6926337-6926540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
131, 25
               

               
Conread position:
               
126-332
               

               
Cow position:
               
chr13:15083486-15083688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
136, 25
               

               
Conread position:
               
126-335
               

               
Cow position:
               
chr13:40491042-40491250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
131, 18
               

               
Conread position:
               
126-336
               

               
Cow position:
               
chr13:8667440-8667653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
136, 25
               

               
Conread position:
               
126-339
               

               
Cow position:
               
chr13:60509299-60509081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
135, 25
               

               
Conread position:
               
126-340
               

               
Cow position:
               
chr13:34873410-34873629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
135, 25
               

               
Conread position:
               
126-345
               

               
Cow position:
               
chr13:25926613-25926836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
141, 25
               

               
Conread position:
               
126-350
               

               
Cow position:
               
chr13:1043170-1042918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
47, 26
               

               
Conread position:
               
126-350
               

               
Cow position:
               
chr13:12876151-12875923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
141, 25
               

               
Conread position:
               
126-350
               

               
Cow position:
               
chr13:28552411-28552634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
136, 26
               

               
Conread position:
               
126-352
               

               
Cow position:
               
chr13:17823125-17822901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
135, 25
               

               
Conread position:
               
126-353
               

               
Cow position:
               
chr13:6861000-6861233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
74, 25
               

               
Conread position:
               
126-353
               

               
Cow position:
               
chr13:19033380-19033603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
136, 25
               

               
Conread position:
               
126-353
               

               
Cow position:
               
chr13:20360100-20360327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
135, 26
               

               
Conread position:
               
126-353
               

               
Cow position:
               
chr13:25547761-25547535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
135, 25
               

               
Conread position:
               
126-353
               

               
Cow position:
               
chr13:47186056-47186275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
118, 25
               

               
Conread position:
               
126-353
               

               
Cow position:
               
chr13:49475896-49476136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
126, 25
               

               
Conread position:
               
126-353
               

               
Cow position:
               
chr13:55583019-55583244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
72, 25
               

               
Conread position:
               
126-353
               

               
Cow position:
               
chr13:59170469-59170702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
49, 25
               

               
Conread position:
               
126-354
               

               
Cow position:
               
chr13:25969830-25970046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
171, 25
               

               
Conread position:
               
126-354
               

               
Cow position:
               
chr13:60973889-60974134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
30, 79
               

               
Conread position:
               
126-356
               

               
Cow position:
               
chr13:5279381-5279133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
118, 26
               

               
Conread position:
               
126-356
               

               
Cow position:
               
chr13:8362922-8362694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
136, 26
               

               
Conread position:
               
126-356
               

               
Cow position:
               
chr13:10925098-10924859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
127, 25
               

               
Conread position:
               
126-356
               

               
Cow position:
               
chr13:11260102-11260324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
186, 25
               

               
Conread position:
               
126-356
               

               
Cow position:
               
chr13:13320622-13320848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
126, 25
               

               
Conread position:
               
126-356
               

               
Cow position:
               
chr13:15964123-15964372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
49, 25
               

               
Conread position:
               
126-356
               

               
Cow position:
               
chr13:15991406-15991177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
75, 25
               

               
Conread position:
               
126-356
               

               
Cow position:
               
chr13:18999356-18999594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
74, 25
               

               
Conread position:
               
126-356
               

               
Cow position:
               
chr13:20174563-20174802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
135, 25
               

               
Conread position:
               
126-356
               

               
Cow position:
               
chr13:24230034-24230263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
131, 25
               

               
Conread position:
               
126-356
               

               
Cow position:
               
chr13:33352540-33352295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
34, 25
               

               
Conread position:
               
126-356
               

               
Cow position:
               
chr13:38873132-38872898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
27, 178
               

               
Conread position:
               
126-356
               

               
Cow position:
               
chr13:42229126-42229375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
45, 25
               

               
Conread position:
               
126-373
               

               
Cow position:
               
chr13:18340356-18340602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
127, 25
               

               
Conread position:
               
127-297
               

               
Cow position:
               
chr13:47227543-47227366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
63, 24
               

               
Conread position:
               
127-356
               

               
Cow position:
               
chr13:43893508-43893267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
59, 25
               

               
Conread position:
               
128-329
               

               
Cow position:
               
chr13:37069168-37069371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
125, 24
               

               
Conread position:
               
143-356
               

               
Cow position:
               
chr13:11096015-11096228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
22, 8
               

               
Conread position:
               
148-356
               

               
Cow position:
               
chr13:20839405-20839617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
104, 14
               

               
Conread position:
               
149-314
               

               
Cow position:
               
chr13:13182039-13182204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
41, 10
               

               
Conread position:
               
149-354
               

               
Cow position:
               
chr13:24110316-24110538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
149-356
               

               
Cow position:
               
chr13:11643774-11643995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
28, 159
               

               
Conread position:
               
150-356
               

               
Cow position:
               
chr13:13297517-13297729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
40, 104
               

               
Conread position:
               
154-352
               

               
Cow position:
               
chr13:28683205-28683414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
36, 27
               

               
Conread position:
               
155-289
               

               
Cow position:
               
chr13:563518-563383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
155-296
               

               
Cow position:
               
chr13:21294924-21295067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
102, 19
               

               
Conread position:
               
155-345
               

               
Cow position:
               
chr13:26369365-26369568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
18, 93
               

               
Conread position:
               
155-348
               

               
Cow position:
               
chr13:52586197-52585988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
155-350
               

               
Cow position:
               
chr13:37381644-37381849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
35, 147
               

               
Conread position:
               
155-356
               

               
Cow position:
               
chr13:2413876-2414082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
98, 29
               

               
Conread position:
               
155-356
               

               
Cow position:
               
chr13:6389237-6389434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
27, 97
               

               
Conread position:
               
155-356
               

               
Cow position:
               
chr13:10929144-10928938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
118, 145
               

               
Conread position:
               
155-356
               

               
Cow position:
               
chr13:17439925-17439716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
35, 148
               

               
Conread position:
               
155-356
               

               
Cow position:
               
chr13:37640435-37640637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
102, 31
               

               
Conread position:
               
155-356
               

               
Cow position:
               
chr13:51116179-51115968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
106, 9
               

               
Conread position:
               
157-356
               

               
Cow position:
               
chr13:61990479-61990283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
26, 60
               

               
Conread position:
               
160-356
               

               
Cow position:
               
chr13:36771573-36771366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
17, 61
               

               
Conread position:
               
160-357
               

               
Cow position:
               
chr13:13176499-13176706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
102, 150
               

               
Conread position:
               
160-357
               

               
Cow position:
               
chr13:13765633-13765840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
13, 87
               

               
Conread position:
               
161-333
               

               
Cow position:
               
chr13:51822021-51821849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
101, 23
               

               
Conread position:
               
161-353
               

               
Cow position:
               
chr13:39367807-39368011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
17, 152
               

               
Conread position:
               
162-356
               

               
Cow position:
               
chr13:17837801-17838003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
97, 143
               

               
Conread position:
               
163-356
               

               
Cow position:
               
chr13:15282083-15281886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
83, 137
               

               
Conread position:
               
163-356
               

               
Cow position:
               
chr13:37503732-37503527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
27, 146
               

               
Conread position:
               
164-356
               

               
Cow position:
               
chr13:3211402-3211605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
26, 9
               

               
Conread position:
               
164-356
               

               
Cow position:
               
chr13:9644028-9643833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
26, 37
               

               
Conread position:
               
165-318
               

               
Cow position:
               
chr13:51814079-51813922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
25, 137
               

               
Conread position:
               
165-356
               

               
Cow position:
               
chr13:15110167-15110373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
167-349
               

               
Cow position:
               
chr13:38278290-38278103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
23, 12
               

               
Conread position:
               
167-354
               

               
Cow position:
               
chr13:18243716-18243913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
170-356
               

               
Cow position:
               
chr13:12206907-12207097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
81, 136
               

               
Conread position:
               
175-356
               

               
Cow position:
               
chr13:17563603-17563790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
15, 31
               

               
Conread position:
               
176-345
               

               
Cow position:
               
chr13:6342223-6342045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
177-353
               

               
Cow position:
               
chr13:8555330-8555509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
5, 35
               

               
Conread position:
               
178-354
               

               
Cow position:
               
chr13:12547042-12546859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
12, 133
               

               
Conread position:
               
179-356
               

               
Cow position:
               
chr13:25435257-25435066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
11, 57
               

               
Conread position:
               
179-356
               

               
Cow position:
               
chr13:51901451-51901646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
11, 130
               

               
Conread position:
               
179-356
               

               
Cow position:
               
chr13:52284684-52284862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
11, 5
               

               
Conread position:
               
180-350
               

               
Cow position:
               
chr13:40722839-40722663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
10, 155
               

               
Conread position:
               
180-351
               

               
Cow position:
               
chr13:21283836-21283653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
10, 128
               

               
Conread position:
               
180-356
               

               
Cow position:
               
chr13:827114-827296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
82, 125
               

               
Conread position:
               
180-356
               

               
Cow position:
               
chr13:43762037-43762224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
10, 16
               

               
Conread position:
               
180-356
               

               
Cow position:
               
chr13:56148389-56148577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
180-356
               

               
Cow position:
               
chr13:56160578-56160390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
180-359
               

               
Cow position:
               
chr13:9117697-9117513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
10, 34
               

               
Conread position:
               
181-350
               

               
Cow position:
               
chr13:43829113-43829292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
9, 125
               

               
Conread position:
               
182-350
               

               
Cow position:
               
chr13:7663550-7663374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
75, 12
               

               
Conread position:
               
182-356
               

               
Cow position:
               
chr13:25428353-25428174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
8, 104
               

               
Conread position:
               
182-356
               

               
Cow position:
               
chr13:45074043-45073864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
123, 116
               

               
Conread position:
               
182-356
               

               
Cow position:
               
chr13:46181662-46181845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
16, 126
               

               
Conread position:
               
182-356
               

               
Cow position:
               
chr13:46736086-46736266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
84, 123
               

               
Conread position:
               
183-329
               

               
Cow position:
               
chr13:15069830-15069983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
183-356
               

               
Cow position:
               
chr13:8374901-8374718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
183-356
               

               
Cow position:
               
chr13:10845476-10845649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
122, 76
               

               
Conread position:
               
184-356
               

               
Cow position:
               
chr13:47964308-47964141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
186-352
               

               
Cow position:
               
chr13:17110102-17110270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
119, 63
               

               
Conread position:
               
186-353
               

               
Cow position:
               
chr13:23856086-23856263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
186-353
               

               
Cow position:
               
chr13:55727777-55727951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
67, 119
               

               
Conread position:
               
186-355
               

               
Cow position:
               
chr13:37947076-37946897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
80, 71
               

               
Conread position:
               
186-356
               

               
Cow position:
               
chr13:11591626-11591801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
46, 64
               

               
Conread position:
               
186-356
               

               
Cow position:
               
chr13:23270330-23270158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
66, 156
               

               
Conread position:
               
186-356
               

               
Cow position:
               
chr13:37981869-37981691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
72, 117
               

               
Conread position:
               
188-354
               

               
Cow position:
               
chr13:8524746-8524564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
20, 122
               

               
Conread position:
               
188-356
               

               
Cow position:
               
chr13:18181898-18181719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
188-356
               

               
Cow position:
               
chr13:56677892-56678069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
189-346
               

               
Cow position:
               
chr13:51857007-51856842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
189-356
               

               
Cow position:
               
chr13:8609669-8609495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
58, 116
               

               
Conread position:
               
191-356
               

               
Cow position:
               
chr13:20473802-20473628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
62, 119
               

               
Conread position:
               
192-356
               

               
Cow position:
               
chr13:6061127-6060956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
61, 163
               

               
Conread position:
               
192-356
               

               
Cow position:
               
chr13:29831556-29831383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
37, 109
               

               
Conread position:
               
194-356
               

               
Cow position:
               
chr13:13465883-13465726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
124, 81
               

               
Conread position:
               
195-349
               

               
Cow position:
               
chr13:60393668-60393830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
195-356
               

               
Cow position:
               
chr13:6153900-6153729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
200-345
               

               
Cow position:
               
chr13:11955228-11955071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
203-319
               

               
Cow position:
               
chr13:15739585-15739704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
203-354
               

               
Cow position:
               
chr13:8201591-8201431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
55, 106
               

               
Conread position:
               
210-356
               

               
Cow position:
               
chr13:8369065-8369211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
51, 27
               

               
Conread position:
               
225-356
               

               
Cow position:
               
chr13:61166536-61166397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
34, 79
               
Show alignments to all cow chromosomes.