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Cow genome map

           
Conread name:
           
mCP1-MI-P-CP1-nwt-d-02-0-UI.s1
        

               
Conread position:
               
10-287
               

               
Cow position:
               
chr14:37436965-37436670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
27, 20
               

               
Conread position:
               
45-356
               

               
Cow position:
               
chr14:10693464-10693148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
81, 7
               

               
Conread position:
               
68-356
               

               
Cow position:
               
chr14:29964831-29965128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
58, 92
               

               
Conread position:
               
71-327
               

               
Cow position:
               
chr14:15428300-15428559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
45, 81
               

               
Conread position:
               
71-356
               

               
Cow position:
               
chr14:41303028-41302722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
21, 91
               

               
Conread position:
               
74-356
               

               
Cow position:
               
chr14:28115369-28115075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
52, 27
               

               
Conread position:
               
75-250
               

               
Cow position:
               
chr14:31893409-31893576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
23, 75
               

               
Conread position:
               
76-251
               

               
Cow position:
               
chr14:36151145-36151322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
22, 85
               

               
Conread position:
               
76-264
               

               
Cow position:
               
chr14:25290630-25290824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
48, 84
               

               
Conread position:
               
76-328
               

               
Cow position:
               
chr14:4848173-4848427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
50, 25
               

               
Conread position:
               
76-352
               

               
Cow position:
               
chr14:34331524-34331218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
20, 9
               

               
Conread position:
               
76-356
               

               
Cow position:
               
chr14:21963939-21964229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
26, 85
               

               
Conread position:
               
77-317
               

               
Cow position:
               
chr14:42440098-42439842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
49, 83
               

               
Conread position:
               
77-326
               

               
Cow position:
               
chr14:28923987-28924248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
25, 85
               

               
Conread position:
               
78-351
               

               
Cow position:
               
chr14:50362618-50362901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
61, 24
               

               
Conread position:
               
78-353
               

               
Cow position:
               
chr14:45052264-45052548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
58, 14
               

               
Conread position:
               
79-252
               

               
Cow position:
               
chr14:12137841-12138015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
23, 79
               

               
Conread position:
               
79-260
               

               
Cow position:
               
chr14:11831973-11831783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
46, 25
               

               
Conread position:
               
79-317
               

               
Cow position:
               
chr14:11576895-11577138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
45, 22
               

               
Conread position:
               
79-350
               

               
Cow position:
               
chr14:19129324-19129614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
77, 47
               

               
Conread position:
               
79-350
               

               
Cow position:
               
chr14:24236645-24236932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
19, 83
               

               
Conread position:
               
79-353
               

               
Cow position:
               
chr14:33341579-33341864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
26, 79
               

               
Conread position:
               
79-356
               

               
Cow position:
               
chr14:48741041-48740760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
46, 77
               

               
Conread position:
               
79-357
               

               
Cow position:
               
chr14:22941915-22941610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
46, 79
               

               
Conread position:
               
80-250
               

               
Cow position:
               
chr14:11916993-11917153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
18, 70
               

               
Conread position:
               
80-250
               

               
Cow position:
               
chr14:38458429-38458590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
80-273
               

               
Cow position:
               
chr14:3923741-3923930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
16, 72
               

               
Conread position:
               
80-293
               

               
Cow position:
               
chr14:18270183-18270401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
18, 48
               

               
Conread position:
               
80-296
               

               
Cow position:
               
chr14:27364408-27364627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
37, 75
               

               
Conread position:
               
80-296
               

               
Cow position:
               
chr14:45955113-45955330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
41, 81
               

               
Conread position:
               
80-308
               

               
Cow position:
               
chr14:20234366-20234132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
41, 78
               

               
Conread position:
               
80-318
               

               
Cow position:
               
chr14:18345898-18345661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
173, 51
               

               
Conread position:
               
80-350
               

               
Cow position:
               
chr14:35381411-35381695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
13, 84
               

               
Conread position:
               
80-351
               

               
Cow position:
               
chr14:33457219-33456935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
46, 80
               

               
Conread position:
               
80-353
               

               
Cow position:
               
chr14:16344320-16344061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
48, 77
               

               
Conread position:
               
80-356
               

               
Cow position:
               
chr14:12512063-12511790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
46, 22
               

               
Conread position:
               
80-356
               

               
Cow position:
               
chr14:13809779-13810048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
16, 47
               

               
Conread position:
               
80-356
               

               
Cow position:
               
chr14:23761717-23761981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
110, 40
               

               
Conread position:
               
80-356
               

               
Cow position:
               
chr14:26442519-26442229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
60, 21
               

               
Conread position:
               
80-356
               

               
Cow position:
               
chr14:26628688-26628411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
115, 21
               

               
Conread position:
               
80-357
               

               
Cow position:
               
chr14:23104170-23103885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
46, 80
               

               
Conread position:
               
81-296
               

               
Cow position:
               
chr14:18301783-18302010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
45, 74
               

               
Conread position:
               
81-325
               

               
Cow position:
               
chr14:40230809-40230562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
21, 78
               

               
Conread position:
               
81-335
               

               
Cow position:
               
chr14:14466636-14466381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
13, 85
               

               
Conread position:
               
81-353
               

               
Cow position:
               
chr14:1708832-1708549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
45, 79
               

               
Conread position:
               
81-353
               

               
Cow position:
               
chr14:31130551-31130271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
20, 80
               

               
Conread position:
               
81-356
               

               
Cow position:
               
chr14:19618914-19618640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 19
               

               
Conread position:
               
81-356
               

               
Cow position:
               
chr14:35420936-35420652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
15, 97
               

               
Conread position:
               
82-270
               

               
Cow position:
               
chr14:8027739-8027544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
49, 78
               

               
Conread position:
               
82-319
               

               
Cow position:
               
chr14:37479206-37479423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
82-341
               

               
Cow position:
               
chr14:27044958-27044677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
44, 16
               

               
Conread position:
               
82-352
               

               
Cow position:
               
chr14:7198327-7198610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
19, 74
               

               
Conread position:
               
82-354
               

               
Cow position:
               
chr14:12244555-12244273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
16, 48
               

               
Conread position:
               
82-356
               

               
Cow position:
               
chr14:11056904-11056629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
43, 19
               

               
Conread position:
               
84-351
               

               
Cow position:
               
chr14:25398903-25399179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
102, 51
               

               
Conread position:
               
85-260
               

               
Cow position:
               
chr14:27303487-27303664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
12, 68
               

               
Conread position:
               
85-267
               

               
Cow position:
               
chr14:25912485-25912664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
76, 54
               

               
Conread position:
               
85-270
               

               
Cow position:
               
chr14:44153157-44152960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
85-322
               

               
Cow position:
               
chr14:18941456-18941209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
41, 17
               

               
Conread position:
               
85-348
               

               
Cow position:
               
chr14:26655305-26655032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
44, 16
               

               
Conread position:
               
85-350
               

               
Cow position:
               
chr14:35503197-35503469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
63, 16
               

               
Conread position:
               
85-353
               

               
Cow position:
               
chr14:28304956-28304676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
40, 73
               

               
Conread position:
               
85-353
               

               
Cow position:
               
chr14:28987520-28987803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
42, 75
               

               
Conread position:
               
85-356
               

               
Cow position:
               
chr14:6541897-6541613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
12, 229
               

               
Conread position:
               
85-356
               

               
Cow position:
               
chr14:18309471-18309186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
7, 56
               

               
Conread position:
               
85-356
               

               
Cow position:
               
chr14:25778927-25779208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
35, 68
               

               
Conread position:
               
85-356
               

               
Cow position:
               
chr14:38920788-38921060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
181, 72
               

               
Conread position:
               
85-356
               

               
Cow position:
               
chr14:41486439-41486149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
11, 70
               

               
Conread position:
               
85-357
               

               
Cow position:
               
chr14:38747513-38747778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
41, 14
               

               
Conread position:
               
86-272
               

               
Cow position:
               
chr14:23465220-23465031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
44, 68
               

               
Conread position:
               
86-351
               

               
Cow position:
               
chr14:20712852-20712584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
18, 70
               

               
Conread position:
               
86-353
               

               
Cow position:
               
chr14:1803286-1803007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
43, 15
               

               
Conread position:
               
86-354
               

               
Cow position:
               
chr14:36443183-36442908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
42, 14
               

               
Conread position:
               
86-356
               

               
Cow position:
               
chr14:10078086-10078380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
87-356
               

               
Cow position:
               
chr14:16352191-16352456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
166, 45
               

               
Conread position:
               
89-356
               

               
Cow position:
               
chr14:21933509-21933230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
101, 19
               

               
Conread position:
               
89-356
               

               
Cow position:
               
chr14:40474397-40474672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
40, 70
               

               
Conread position:
               
90-317
               

               
Cow position:
               
chr14:20466771-20467000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
13, 71
               

               
Conread position:
               
90-318
               

               
Cow position:
               
chr14:23078951-23078721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
27, 65
               

               
Conread position:
               
90-319
               

               
Cow position:
               
chr14:25919685-25919925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
17, 68
               

               
Conread position:
               
91-263
               

               
Cow position:
               
chr14:24746293-24746476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
38, 69
               

               
Conread position:
               
91-349
               

               
Cow position:
               
chr14:49487801-49488065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
57, 48
               

               
Conread position:
               
92-256
               

               
Cow position:
               
chr14:47200296-47200122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
33, 68
               

               
Conread position:
               
92-289
               

               
Cow position:
               
chr14:33827945-33828162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
33, 68
               

               
Conread position:
               
92-318
               

               
Cow position:
               
chr14:12033407-12033170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
34, 66
               

               
Conread position:
               
92-349
               

               
Cow position:
               
chr14:8923749-8923479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
35, 63
               

               
Conread position:
               
92-351
               

               
Cow position:
               
chr14:48961413-48961683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
27, 60
               

               
Conread position:
               
92-352
               

               
Cow position:
               
chr14:10858278-10858540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
120, 37
               

               
Conread position:
               
92-355
               

               
Cow position:
               
chr14:14622330-14622070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
168, 87
               

               
Conread position:
               
92-356
               

               
Cow position:
               
chr14:12635039-12634776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
98, 39
               

               
Conread position:
               
92-356
               

               
Cow position:
               
chr14:23442864-23443129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
34, 68
               

               
Conread position:
               
92-356
               

               
Cow position:
               
chr14:36289952-36289688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
69, 16
               

               
Conread position:
               
92-356
               

               
Cow position:
               
chr14:37422935-37422677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
37, 61
               

               
Conread position:
               
92-356
               

               
Cow position:
               
chr14:37884094-37883803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
36, 67
               

               
Conread position:
               
92-356
               

               
Cow position:
               
chr14:43192701-43192949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
11, 38
               

               
Conread position:
               
92-362
               

               
Cow position:
               
chr14:1868950-1868680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
71, 37
               

               
Conread position:
               
93-311
               

               
Cow position:
               
chr14:5959154-5958923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
36, 67
               

               
Conread position:
               
93-315
               

               
Cow position:
               
chr14:38286146-38285902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
32, 69
               

               
Conread position:
               
93-353
               

               
Cow position:
               
chr14:12954536-12954274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
178, 36
               

               
Conread position:
               
93-354
               

               
Cow position:
               
chr14:1796036-1796299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
36, 62
               

               
Conread position:
               
93-354
               

               
Cow position:
               
chr14:24945655-24945380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
33, 64
               

               
Conread position:
               
93-356
               

               
Cow position:
               
chr14:6736029-6735748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
93-356
               

               
Cow position:
               
chr14:8786698-8786441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
173, 86
               

               
Conread position:
               
93-356
               

               
Cow position:
               
chr14:23424104-23424368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
33, 67
               

               
Conread position:
               
93-356
               

               
Cow position:
               
chr14:24387287-24387559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
13, 67
               

               
Conread position:
               
94-355
               

               
Cow position:
               
chr14:48838431-48838705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
35, 97
               

               
Conread position:
               
95-264
               

               
Cow position:
               
chr14:32784277-32784102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
34, 65
               

               
Conread position:
               
95-352
               

               
Cow position:
               
chr14:42330187-42330459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
32, 65
               

               
Conread position:
               
95-356
               

               
Cow position:
               
chr14:4282669-4282397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
34, 207
               

               
Conread position:
               
95-356
               

               
Cow position:
               
chr14:4877387-4877121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
8, 50
               

               
Conread position:
               
95-356
               

               
Cow position:
               
chr14:33791034-33791297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
29, 65
               

               
Conread position:
               
96-317
               

               
Cow position:
               
chr14:16749850-16749615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
20, 57
               

               
Conread position:
               
97-260
               

               
Cow position:
               
chr14:6595470-6595625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
97-318
               

               
Cow position:
               
chr14:3194716-3194927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
65, 38
               

               
Conread position:
               
97-318
               

               
Cow position:
               
chr14:10609522-10609751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
29, 64
               

               
Conread position:
               
97-353
               

               
Cow position:
               
chr14:11285413-11285683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
32, 203
               

               
Conread position:
               
98-351
               

               
Cow position:
               
chr14:40754400-40754138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
31, 62
               

               
Conread position:
               
100-356
               

               
Cow position:
               
chr14:19594289-19594019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
63, 29
               

               
Conread position:
               
101-250
               

               
Cow position:
               
chr14:8036179-8036320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
101-250
               

               
Cow position:
               
chr14:24880749-24880609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
101-260
               

               
Cow position:
               
chr14:20070909-20071077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
25, 52
               

               
Conread position:
               
101-316
               

               
Cow position:
               
chr14:20482005-20481774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
25, 219
               

               
Conread position:
               
101-353
               

               
Cow position:
               
chr14:15504310-15504046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
39, 73
               

               
Conread position:
               
101-356
               

               
Cow position:
               
chr14:1646326-1646081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
118, 16
               

               
Conread position:
               
101-356
               

               
Cow position:
               
chr14:4203240-4202983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
152, 12
               

               
Conread position:
               
101-356
               

               
Cow position:
               
chr14:24981300-24981565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 51
               

               
Conread position:
               
102-352
               

               
Cow position:
               
chr14:42419431-42419167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
26, 55
               

               
Conread position:
               
102-356
               

               
Cow position:
               
chr14:37447611-37447359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 49
               

               
Conread position:
               
103-250
               

               
Cow position:
               
chr14:42153548-42153408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
7, 49
               

               
Conread position:
               
105-237
               

               
Cow position:
               
chr14:6175102-6175235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
22, 83
               

               
Conread position:
               
109-333
               

               
Cow position:
               
chr14:42246859-42247087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
17, 48
               

               
Conread position:
               
112-318
               

               
Cow position:
               
chr14:40952132-40952329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
15, 40
               

               
Conread position:
               
113-349
               

               
Cow position:
               
chr14:39095323-39095077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
16, 40
               

               
Conread position:
               
118-319
               

               
Cow position:
               
chr14:24712760-24712552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
12, 34
               

               
Conread position:
               
118-356
               

               
Cow position:
               
chr14:7695135-7695378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
9, 34
               

               
Conread position:
               
125-328
               

               
Cow position:
               
chr14:48426952-48427152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
140, 26
               

               
Conread position:
               
125-335
               

               
Cow position:
               
chr14:21530196-21529990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
140, 29
               

               
Conread position:
               
125-355
               

               
Cow position:
               
chr14:19852056-19851823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
128, 26
               

               
Conread position:
               
125-356
               

               
Cow position:
               
chr14:8541327-8541104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
128, 26
               

               
Conread position:
               
125-356
               

               
Cow position:
               
chr14:33300574-33300813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
12, 27
               

               
Conread position:
               
126-260
               

               
Cow position:
               
chr14:18412713-18412585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
126-289
               

               
Cow position:
               
chr14:38674050-38673879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
57, 25
               

               
Conread position:
               
126-308
               

               
Cow position:
               
chr14:26918874-26919057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
133, 28
               

               
Conread position:
               
126-339
               

               
Cow position:
               
chr14:34775868-34775654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
135, 25
               

               
Conread position:
               
126-350
               

               
Cow position:
               
chr14:21357438-21357665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
142, 25
               

               
Conread position:
               
126-351
               

               
Cow position:
               
chr14:2975205-2974985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
120, 25
               

               
Conread position:
               
126-353
               

               
Cow position:
               
chr14:12081245-12081030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
136, 25
               

               
Conread position:
               
126-353
               

               
Cow position:
               
chr14:12520423-12520197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
133, 25
               

               
Conread position:
               
126-353
               

               
Cow position:
               
chr14:45312677-45312900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
135, 24
               

               
Conread position:
               
126-354
               

               
Cow position:
               
chr14:28378238-28378469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
127, 9
               

               
Conread position:
               
126-355
               

               
Cow position:
               
chr14:41127787-41128004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
140, 27
               

               
Conread position:
               
126-355
               

               
Cow position:
               
chr14:47672996-47672777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
131, 25
               

               
Conread position:
               
126-355
               

               
Cow position:
               
chr14:48496266-48496039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
136, 28
               

               
Conread position:
               
126-356
               

               
Cow position:
               
chr14:5630049-5630272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
125, 25
               

               
Conread position:
               
126-356
               

               
Cow position:
               
chr14:8101678-8101901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
126, 25
               

               
Conread position:
               
126-356
               

               
Cow position:
               
chr14:27076847-27077097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
57, 25
               

               
Conread position:
               
126-356
               

               
Cow position:
               
chr14:38144229-38143998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
141, 28
               

               
Conread position:
               
126-356
               

               
Cow position:
               
chr14:41472095-41471861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
29, 25
               

               
Conread position:
               
127-344
               

               
Cow position:
               
chr14:41191216-41190985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
134, 24
               

               
Conread position:
               
127-357
               

               
Cow position:
               
chr14:18763561-18763332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
13, 174
               

               
Conread position:
               
128-264
               

               
Cow position:
               
chr14:24806479-24806607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
128-296
               

               
Cow position:
               
chr14:18350984-18350808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
50, 23
               

               
Conread position:
               
128-354
               

               
Cow position:
               
chr14:7036477-7036246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
133, 23
               

               
Conread position:
               
142-353
               

               
Cow position:
               
chr14:19394252-19394467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
10, 38
               

               
Conread position:
               
143-346
               

               
Cow position:
               
chr14:3943665-3943452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
9, 166
               

               
Conread position:
               
148-354
               

               
Cow position:
               
chr14:49022002-49021794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
105, 31
               

               
Conread position:
               
151-353
               

               
Cow position:
               
chr14:48689431-48689631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
111, 29
               

               
Conread position:
               
151-356
               

               
Cow position:
               
chr14:40165320-40165534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
27, 63
               

               
Conread position:
               
152-356
               

               
Cow position:
               
chr14:16032911-16033119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
161, 34
               

               
Conread position:
               
155-356
               

               
Cow position:
               
chr14:34983769-34983974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
90, 26
               

               
Conread position:
               
157-356
               

               
Cow position:
               
chr14:42436927-42437136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
159-341
               

               
Cow position:
               
chr14:22583059-22583243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
107, 36
               

               
Conread position:
               
160-296
               

               
Cow position:
               
chr14:15491062-15491205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
23, 32
               

               
Conread position:
               
160-328
               

               
Cow position:
               
chr14:34096660-34096486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
30, 144
               

               
Conread position:
               
160-356
               

               
Cow position:
               
chr14:4990909-4991116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
108, 31
               

               
Conread position:
               
160-356
               

               
Cow position:
               
chr14:26097790-26097581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
23, 148
               

               
Conread position:
               
160-356
               

               
Cow position:
               
chr14:33830207-33830407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
33, 145
               

               
Conread position:
               
161-351
               

               
Cow position:
               
chr14:18657699-18657498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
101, 25
               

               
Conread position:
               
162-303
               

               
Cow position:
               
chr14:42276533-42276679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
162-352
               

               
Cow position:
               
chr14:9901091-9901285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
26, 74
               

               
Conread position:
               
165-351
               

               
Cow position:
               
chr14:25824607-25824795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
86, 41
               

               
Conread position:
               
165-354
               

               
Cow position:
               
chr14:33247519-33247323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
25, 141
               

               
Conread position:
               
166-356
               

               
Cow position:
               
chr14:1978162-1977960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
17, 159
               

               
Conread position:
               
168-331
               

               
Cow position:
               
chr14:34399885-34399714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
22, 138
               

               
Conread position:
               
168-349
               

               
Cow position:
               
chr14:34449058-34448864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
22, 138
               

               
Conread position:
               
168-356
               

               
Cow position:
               
chr14:5835826-5836018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
94, 131
               

               
Conread position:
               
171-354
               

               
Cow position:
               
chr14:39778668-39778864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
15, 135
               

               
Conread position:
               
175-356
               

               
Cow position:
               
chr14:15997843-15997651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
78, 8
               

               
Conread position:
               
177-356
               

               
Cow position:
               
chr14:30661918-30662097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
5, 51
               

               
Conread position:
               
179-355
               

               
Cow position:
               
chr14:17841365-17841179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
83, 7
               

               
Conread position:
               
180-314
               

               
Cow position:
               
chr14:39037151-39037288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
10, 48
               

               
Conread position:
               
180-321
               

               
Cow position:
               
chr14:25954269-25954126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
73, 12
               

               
Conread position:
               
180-352
               

               
Cow position:
               
chr14:7959712-7959884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
10, 76
               

               
Conread position:
               
180-354
               

               
Cow position:
               
chr14:12035336-12035516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
180-356
               

               
Cow position:
               
chr14:6226688-6226516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
10, 49
               

               
Conread position:
               
180-356
               

               
Cow position:
               
chr14:19863509-19863322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
10, 127
               

               
Conread position:
               
181-351
               

               
Cow position:
               
chr14:33643887-33644059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
72, 121
               

               
Conread position:
               
181-356
               

               
Cow position:
               
chr14:14316814-14316993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
182-351
               

               
Cow position:
               
chr14:12127482-12127306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
71, 150
               

               
Conread position:
               
182-352
               

               
Cow position:
               
chr14:18904678-18904503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
15, 23
               

               
Conread position:
               
182-356
               

               
Cow position:
               
chr14:25385959-25385775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
7, 128
               

               
Conread position:
               
183-352
               

               
Cow position:
               
chr14:36555217-36555051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
76, 44
               

               
Conread position:
               
183-355
               

               
Cow position:
               
chr14:33309574-33309397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
70, 122
               

               
Conread position:
               
184-356
               

               
Cow position:
               
chr14:33774117-33773939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
185-354
               

               
Cow position:
               
chr14:40033927-40034092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
67, 7
               

               
Conread position:
               
186-350
               

               
Cow position:
               
chr14:27275095-27275264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
76, 69
               

               
Conread position:
               
186-353
               

               
Cow position:
               
chr14:13426782-13426954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
67, 101
               

               
Conread position:
               
186-356
               

               
Cow position:
               
chr14:1868451-1868274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
76, 131
               

               
Conread position:
               
186-356
               

               
Cow position:
               
chr14:6175529-6175693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
129, 53
               

               
Conread position:
               
186-356
               

               
Cow position:
               
chr14:20600317-20600496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
48, 121
               

               
Conread position:
               
186-356
               

               
Cow position:
               
chr14:33751470-33751647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
79, 116
               

               
Conread position:
               
186-356
               

               
Cow position:
               
chr14:41253060-41252878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
36, 116
               

               
Conread position:
               
186-356
               

               
Cow position:
               
chr14:48412950-48412769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
66, 125
               

               
Conread position:
               
186-357
               

               
Cow position:
               
chr14:41267800-41267639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
119, 79
               

               
Conread position:
               
188-353
               

               
Cow position:
               
chr14:10697567-10697398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
74, 16
               

               
Conread position:
               
188-356
               

               
Cow position:
               
chr14:23478761-23478931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
74, 128
               

               
Conread position:
               
188-356
               

               
Cow position:
               
chr14:47510895-47511068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
85, 114
               

               
Conread position:
               
189-352
               

               
Cow position:
               
chr14:803621-803794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
63, 58
               

               
Conread position:
               
189-356
               

               
Cow position:
               
chr14:46997974-46998147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
72, 116
               

               
Conread position:
               
191-355
               

               
Cow position:
               
chr14:20385048-20384875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
47, 114
               

               
Conread position:
               
191-355
               

               
Cow position:
               
chr14:25381368-25381531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
70, 8
               

               
Conread position:
               
191-356
               

               
Cow position:
               
chr14:16834259-16834436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
61, 114
               

               
Conread position:
               
192-356
               

               
Cow position:
               
chr14:25403997-25403827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
69, 156
               

               
Conread position:
               
195-356
               

               
Cow position:
               
chr14:14187273-14187443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
65, 108
               

               
Conread position:
               
197-356
               

               
Cow position:
               
chr14:41180771-41180598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
59, 26
               

               
Conread position:
               
204-354
               

               
Cow position:
               
chr14:22966706-22966861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
58, 15
               

               
Conread position:
               
218-352
               

               
Cow position:
               
chr14:42784928-42785063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
44, 71
               

               
Conread position:
               
242-353
               

               
Cow position:
               
chr14:33828157-33828268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
63, 56
               
Show alignments to all cow chromosomes.