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Cow genome map

           
Conread name:
           
mCP1-MI-P-CP1-nwt-d-02-0-UI.s1
        

               
Conread position:
               
10-293
               

               
Cow position:
               
chr2:65554521-65554807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
119, 44
               

               
Conread position:
               
10-316
               

               
Cow position:
               
chr2:49716815-49717114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
257, 31
               

               
Conread position:
               
52-225
               

               
Cow position:
               
chr2:30394033-30394219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
29, 112
               

               
Conread position:
               
55-350
               

               
Cow position:
               
chr2:53500804-53501098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
103, 74
               

               
Conread position:
               
58-356
               

               
Cow position:
               
chr2:4016626-4016907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 27
               

               
Conread position:
               
67-260
               

               
Cow position:
               
chr2:37891254-37891454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
59, 34
               

               
Conread position:
               
69-353
               

               
Cow position:
               
chr2:13369880-13369591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
48, 82
               

               
Conread position:
               
70-356
               

               
Cow position:
               
chr2:64323453-64323175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
192, 45
               

               
Conread position:
               
73-311
               

               
Cow position:
               
chr2:57802262-57802510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
55, 25
               

               
Conread position:
               
74-356
               

               
Cow position:
               
chr2:46057789-46058078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
51, 86
               

               
Conread position:
               
75-235
               

               
Cow position:
               
chr2:44076289-44076138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
12, 78
               

               
Conread position:
               
75-258
               

               
Cow position:
               
chr2:39525682-39525501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
101, 37
               

               
Conread position:
               
75-356
               

               
Cow position:
               
chr2:22677419-22677124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
21, 87
               

               
Conread position:
               
75-356
               

               
Cow position:
               
chr2:57733649-57733361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
51, 83
               

               
Conread position:
               
75-368
               

               
Cow position:
               
chr2:1335481-1335770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
23, 66
               

               
Conread position:
               
76-353
               

               
Cow position:
               
chr2:76762434-76762151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
34, 26
               

               
Conread position:
               
77-315
               

               
Cow position:
               
chr2:70559084-70558858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
23, 40
               

               
Conread position:
               
77-353
               

               
Cow position:
               
chr2:24217998-24218273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
55, 24
               

               
Conread position:
               
77-353
               

               
Cow position:
               
chr2:28820590-28820298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
49, 24
               

               
Conread position:
               
77-354
               

               
Cow position:
               
chr2:29160117-29159843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
52, 24
               

               
Conread position:
               
77-356
               

               
Cow position:
               
chr2:29122103-29121813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
71, 8
               

               
Conread position:
               
77-356
               

               
Cow position:
               
chr2:42183587-42183301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
19, 54
               

               
Conread position:
               
77-356
               

               
Cow position:
               
chr2:46119542-46119828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
16, 90
               

               
Conread position:
               
78-327
               

               
Cow position:
               
chr2:21410447-21410182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
48, 24
               

               
Conread position:
               
78-355
               

               
Cow position:
               
chr2:1638840-1638535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
25, 80
               

               
Conread position:
               
79-250
               

               
Cow position:
               
chr2:44103459-44103618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
23, 46
               

               
Conread position:
               
79-260
               

               
Cow position:
               
chr2:10710105-10710277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
19, 81
               

               
Conread position:
               
79-260
               

               
Cow position:
               
chr2:39369079-39368888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
47, 29
               

               
Conread position:
               
79-263
               

               
Cow position:
               
chr2:21950190-21950009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
31, 79
               

               
Conread position:
               
79-314
               

               
Cow position:
               
chr2:40703452-40703690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
19, 79
               

               
Conread position:
               
79-317
               

               
Cow position:
               
chr2:29394790-29395033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
47, 13
               

               
Conread position:
               
79-318
               

               
Cow position:
               
chr2:19320218-19319975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
47, 78
               

               
Conread position:
               
79-354
               

               
Cow position:
               
chr2:12237014-12237306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
49, 21
               

               
Conread position:
               
79-356
               

               
Cow position:
               
chr2:13061989-13062292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
30, 79
               

               
Conread position:
               
79-356
               

               
Cow position:
               
chr2:42608280-42607998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
20, 78
               

               
Conread position:
               
79-356
               

               
Cow position:
               
chr2:73359893-73360173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
13, 33
               

               
Conread position:
               
80-250
               

               
Cow position:
               
chr2:52151051-52151208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
18, 72
               

               
Conread position:
               
80-250
               

               
Cow position:
               
chr2:68998527-68998365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
80-250
               

               
Cow position:
               
chr2:72126948-72126785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
18, 72
               

               
Conread position:
               
80-260
               

               
Cow position:
               
chr2:2754806-2754977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
16, 49
               

               
Conread position:
               
80-269
               

               
Cow position:
               
chr2:2031792-2031983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
48, 82
               

               
Conread position:
               
80-283
               

               
Cow position:
               
chr2:20919343-20919548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
37, 12
               

               
Conread position:
               
80-284
               

               
Cow position:
               
chr2:74078894-74079099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
17, 79
               

               
Conread position:
               
80-298
               

               
Cow position:
               
chr2:66561824-66562042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
82, 19
               

               
Conread position:
               
80-310
               

               
Cow position:
               
chr2:30954376-30954616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
46, 78
               

               
Conread position:
               
80-310
               

               
Cow position:
               
chr2:52466235-52466468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
23, 78
               

               
Conread position:
               
80-311
               

               
Cow position:
               
chr2:43990990-43990751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
17, 84
               

               
Conread position:
               
80-318
               

               
Cow position:
               
chr2:15229757-15229497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
12, 83
               

               
Conread position:
               
80-319
               

               
Cow position:
               
chr2:71486992-71486749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
45, 81
               

               
Conread position:
               
80-321
               

               
Cow position:
               
chr2:29682057-29681807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
45, 71
               

               
Conread position:
               
80-339
               

               
Cow position:
               
chr2:45478384-45478645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
12, 81
               

               
Conread position:
               
80-348
               

               
Cow position:
               
chr2:6039233-6038948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
22, 81
               

               
Conread position:
               
80-349
               

               
Cow position:
               
chr2:46162168-46161893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
110, 22
               

               
Conread position:
               
80-353
               

               
Cow position:
               
chr2:32048699-32048416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
12, 78
               

               
Conread position:
               
80-353
               

               
Cow position:
               
chr2:32264179-32264452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
49, 20
               

               
Conread position:
               
80-353
               

               
Cow position:
               
chr2:69579457-69579746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
16, 82
               

               
Conread position:
               
80-356
               

               
Cow position:
               
chr2:7383464-7383747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
72, 134
               

               
Conread position:
               
80-356
               

               
Cow position:
               
chr2:8821460-8821164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
51, 236
               

               
Conread position:
               
80-356
               

               
Cow position:
               
chr2:14634400-14634119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
106, 99
               

               
Conread position:
               
80-356
               

               
Cow position:
               
chr2:15348615-15348323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
17, 82
               

               
Conread position:
               
80-356
               

               
Cow position:
               
chr2:18997932-18997657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
46, 21
               

               
Conread position:
               
80-356
               

               
Cow position:
               
chr2:38658581-38658850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
49, 21
               

               
Conread position:
               
80-356
               

               
Cow position:
               
chr2:43591158-43591425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
78, 21
               

               
Conread position:
               
80-356
               

               
Cow position:
               
chr2:43995148-43994864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
18, 78
               

               
Conread position:
               
80-356
               

               
Cow position:
               
chr2:44051523-44051242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
80-356
               

               
Cow position:
               
chr2:80770321-80770050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
11, 78
               

               
Conread position:
               
80-358
               

               
Cow position:
               
chr2:32431519-32431810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
17, 82
               

               
Conread position:
               
80-358
               

               
Cow position:
               
chr2:76562340-76562036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
80-361
               

               
Cow position:
               
chr2:62743792-62744081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
15, 81
               

               
Conread position:
               
81-248
               

               
Cow position:
               
chr2:75562221-75562056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
45, 11
               

               
Conread position:
               
81-350
               

               
Cow position:
               
chr2:36077576-36077290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
44, 76
               

               
Conread position:
               
81-352
               

               
Cow position:
               
chr2:10628316-10628600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
45, 79
               

               
Conread position:
               
81-353
               

               
Cow position:
               
chr2:49428600-49428315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
44, 79
               

               
Conread position:
               
81-353
               

               
Cow position:
               
chr2:56350696-56350984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
45, 79
               

               
Conread position:
               
81-353
               

               
Cow position:
               
chr2:69199109-69199381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
52, 76
               

               
Conread position:
               
81-354
               

               
Cow position:
               
chr2:14218869-14218582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
43, 20
               

               
Conread position:
               
81-354
               

               
Cow position:
               
chr2:33250872-33251151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
45, 79
               

               
Conread position:
               
81-354
               

               
Cow position:
               
chr2:46614618-46614337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
21, 30
               

               
Conread position:
               
81-354
               

               
Cow position:
               
chr2:56937892-56937616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
44, 74
               

               
Conread position:
               
81-356
               

               
Cow position:
               
chr2:19294807-19294524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
23, 106
               

               
Conread position:
               
81-356
               

               
Cow position:
               
chr2:45784964-45784667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
43, 20
               

               
Conread position:
               
81-356
               

               
Cow position:
               
chr2:67595812-67596090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
46, 26
               

               
Conread position:
               
81-356
               

               
Cow position:
               
chr2:84480282-84480571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
17, 81
               

               
Conread position:
               
82-260
               

               
Cow position:
               
chr2:36124648-36124470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
45, 76
               

               
Conread position:
               
82-264
               

               
Cow position:
               
chr2:12889612-12889802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
82-267
               

               
Cow position:
               
chr2:44177178-44176988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
91, 69
               

               
Conread position:
               
82-269
               

               
Cow position:
               
chr2:64465565-64465748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
32, 75
               

               
Conread position:
               
82-287
               

               
Cow position:
               
chr2:40691747-40691539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
57, 147
               

               
Conread position:
               
82-317
               

               
Cow position:
               
chr2:14826495-14826249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
20, 79
               

               
Conread position:
               
82-345
               

               
Cow position:
               
chr2:55496076-55496346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
14, 81
               

               
Conread position:
               
82-352
               

               
Cow position:
               
chr2:54790497-54790219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
44, 78
               

               
Conread position:
               
82-354
               

               
Cow position:
               
chr2:44022587-44022874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
16, 79
               

               
Conread position:
               
82-356
               

               
Cow position:
               
chr2:24393477-24393759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
38, 81
               

               
Conread position:
               
82-356
               

               
Cow position:
               
chr2:41248779-41248499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
180, 19
               

               
Conread position:
               
82-356
               

               
Cow position:
               
chr2:58153919-58153631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
10, 79
               

               
Conread position:
               
82-356
               

               
Cow position:
               
chr2:68328638-68328920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
63, 19
               

               
Conread position:
               
82-356
               

               
Cow position:
               
chr2:70674955-70674659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
47, 78
               

               
Conread position:
               
82-356
               

               
Cow position:
               
chr2:80275088-80275361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
18, 36
               

               
Conread position:
               
83-356
               

               
Cow position:
               
chr2:27178855-27178589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
27, 71
               

               
Conread position:
               
83-356
               

               
Cow position:
               
chr2:45935753-45936027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
13, 46
               

               
Conread position:
               
83-356
               

               
Cow position:
               
chr2:58135177-58135462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 18
               

               
Conread position:
               
85-273
               

               
Cow position:
               
chr2:44313503-44313696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
17, 76
               

               
Conread position:
               
85-287
               

               
Cow position:
               
chr2:13468423-13468218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
32, 70
               

               
Conread position:
               
85-318
               

               
Cow position:
               
chr2:16488199-16487959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
44, 69
               

               
Conread position:
               
85-318
               

               
Cow position:
               
chr2:71621836-71622075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
15, 76
               

               
Conread position:
               
85-328
               

               
Cow position:
               
chr2:46967986-46968227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
41, 70
               

               
Conread position:
               
85-346
               

               
Cow position:
               
chr2:37112992-37113248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 68
               

               
Conread position:
               
85-346
               

               
Cow position:
               
chr2:56003446-56003180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
73, 16
               

               
Conread position:
               
85-346
               

               
Cow position:
               
chr2:67480199-67479915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
41, 71
               

               
Conread position:
               
85-351
               

               
Cow position:
               
chr2:36575940-36575678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
34, 68
               

               
Conread position:
               
85-352
               

               
Cow position:
               
chr2:19155974-19156247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
41, 77
               

               
Conread position:
               
85-352
               

               
Cow position:
               
chr2:32660392-32660112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
41, 16
               

               
Conread position:
               
85-353
               

               
Cow position:
               
chr2:19211848-19212117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
17, 63
               

               
Conread position:
               
85-354
               

               
Cow position:
               
chr2:46129955-46130215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
43, 16
               

               
Conread position:
               
85-354
               

               
Cow position:
               
chr2:48634840-48635110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
55, 67
               

               
Conread position:
               
85-356
               

               
Cow position:
               
chr2:21003378-21003103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
41, 15
               

               
Conread position:
               
85-356
               

               
Cow position:
               
chr2:21049123-21049383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
44, 75
               

               
Conread position:
               
85-356
               

               
Cow position:
               
chr2:40489013-40488742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
62, 16
               

               
Conread position:
               
85-356
               

               
Cow position:
               
chr2:40597785-40597506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
17, 76
               

               
Conread position:
               
85-356
               

               
Cow position:
               
chr2:41452444-41452166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
44, 16
               

               
Conread position:
               
85-356
               

               
Cow position:
               
chr2:46312647-46312384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
41, 71
               

               
Conread position:
               
85-356
               

               
Cow position:
               
chr2:46342939-46343210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
77, 17
               

               
Conread position:
               
85-356
               

               
Cow position:
               
chr2:59396838-59397123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
17, 76
               

               
Conread position:
               
86-267
               

               
Cow position:
               
chr2:3773114-3773297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
9, 73
               

               
Conread position:
               
86-321
               

               
Cow position:
               
chr2:46019405-46019655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
38, 72
               

               
Conread position:
               
86-350
               

               
Cow position:
               
chr2:45565911-45565642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
58, 15
               

               
Conread position:
               
86-355
               

               
Cow position:
               
chr2:276875-276613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
53, 14
               

               
Conread position:
               
86-355
               

               
Cow position:
               
chr2:777473-777754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
85, 53
               

               
Conread position:
               
86-356
               

               
Cow position:
               
chr2:24530573-24530305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
104, 15
               

               
Conread position:
               
86-356
               

               
Cow position:
               
chr2:46188886-46189166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
37, 75
               

               
Conread position:
               
87-319
               

               
Cow position:
               
chr2:5300809-5300567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
11, 74
               

               
Conread position:
               
87-350
               

               
Cow position:
               
chr2:49467834-49467566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
40, 65
               

               
Conread position:
               
87-356
               

               
Cow position:
               
chr2:13002006-13001734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
43, 74
               

               
Conread position:
               
88-309
               

               
Cow position:
               
chr2:46014969-46014747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
39, 13
               

               
Conread position:
               
88-318
               

               
Cow position:
               
chr2:45619193-45619417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
29, 69
               

               
Conread position:
               
88-320
               

               
Cow position:
               
chr2:46164293-46164531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
37, 72
               

               
Conread position:
               
88-322
               

               
Cow position:
               
chr2:65059247-65059006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
29, 67
               

               
Conread position:
               
88-352
               

               
Cow position:
               
chr2:17966834-17967093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
56, 13
               

               
Conread position:
               
88-356
               

               
Cow position:
               
chr2:387567-387842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
45, 65
               

               
Conread position:
               
88-356
               

               
Cow position:
               
chr2:45542204-45542462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
165, 38
               

               
Conread position:
               
89-318
               

               
Cow position:
               
chr2:54883675-54883448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
40, 67
               

               
Conread position:
               
89-353
               

               
Cow position:
               
chr2:15298742-15298473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
37, 71
               

               
Conread position:
               
89-356
               

               
Cow position:
               
chr2:46120437-46120710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
37, 71
               

               
Conread position:
               
90-352
               

               
Cow position:
               
chr2:43474387-43474113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
50, 87
               

               
Conread position:
               
90-354
               

               
Cow position:
               
chr2:8798255-8797972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
83, 43
               

               
Conread position:
               
90-355
               

               
Cow position:
               
chr2:30642453-30642729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 31
               

               
Conread position:
               
90-356
               

               
Cow position:
               
chr2:30351494-30351774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
13, 71
               

               
Conread position:
               
90-358
               

               
Cow position:
               
chr2:39663584-39663304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
36, 11
               

               
Conread position:
               
91-279
               

               
Cow position:
               
chr2:39068485-39068302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
38, 65
               

               
Conread position:
               
91-286
               

               
Cow position:
               
chr2:67047627-67047427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
39, 69
               

               
Conread position:
               
91-353
               

               
Cow position:
               
chr2:46204722-46204452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
13, 66
               

               
Conread position:
               
91-356
               

               
Cow position:
               
chr2:17328950-17328681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
87, 33
               

               
Conread position:
               
91-356
               

               
Cow position:
               
chr2:66479994-66480256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
162, 62
               

               
Conread position:
               
91-356
               

               
Cow position:
               
chr2:69419384-69419656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
38, 67
               

               
Conread position:
               
92-246
               

               
Cow position:
               
chr2:69828596-69828761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
34, 58
               

               
Conread position:
               
92-249
               

               
Cow position:
               
chr2:11617539-11617365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
33, 71
               

               
Conread position:
               
92-273
               

               
Cow position:
               
chr2:75637526-75637715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
34, 63
               

               
Conread position:
               
92-316
               

               
Cow position:
               
chr2:14626804-14626566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
25, 63
               

               
Conread position:
               
92-316
               

               
Cow position:
               
chr2:40373202-40373424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
172, 37
               

               
Conread position:
               
92-317
               

               
Cow position:
               
chr2:15219314-15219086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 59
               

               
Conread position:
               
92-318
               

               
Cow position:
               
chr2:34474077-34474324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
34, 65
               

               
Conread position:
               
92-319
               

               
Cow position:
               
chr2:16889852-16890082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
69, 94
               

               
Conread position:
               
92-319
               

               
Cow position:
               
chr2:73544700-73544917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
203, 36
               

               
Conread position:
               
92-321
               

               
Cow position:
               
chr2:9543516-9543283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
47, 96
               

               
Conread position:
               
92-323
               

               
Cow position:
               
chr2:32488465-32488692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
62, 48
               

               
Conread position:
               
92-326
               

               
Cow position:
               
chr2:39229013-39228780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
155, 75
               

               
Conread position:
               
92-330
               

               
Cow position:
               
chr2:50913810-50914049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
32, 69
               

               
Conread position:
               
92-334
               

               
Cow position:
               
chr2:69109140-69109392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
34, 69
               

               
Conread position:
               
92-347
               

               
Cow position:
               
chr2:46052705-46052439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
56, 39
               

               
Conread position:
               
92-351
               

               
Cow position:
               
chr2:994167-994428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
71, 38
               

               
Conread position:
               
92-352
               

               
Cow position:
               
chr2:26500734-26500998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
60, 37
               

               
Conread position:
               
92-353
               

               
Cow position:
               
chr2:52484760-52485039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
34, 64
               

               
Conread position:
               
92-354
               

               
Cow position:
               
chr2:46227670-46227392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
37, 70
               

               
Conread position:
               
92-354
               

               
Cow position:
               
chr2:52596530-52596791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
13, 66
               

               
Conread position:
               
92-355
               

               
Cow position:
               
chr2:21380199-21380463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
37, 70
               

               
Conread position:
               
92-356
               

               
Cow position:
               
chr2:992357-992086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
100, 39
               

               
Conread position:
               
92-356
               

               
Cow position:
               
chr2:1304156-1303881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
14, 45
               

               
Conread position:
               
92-356
               

               
Cow position:
               
chr2:12839824-12840111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
36, 224
               

               
Conread position:
               
92-356
               

               
Cow position:
               
chr2:14709922-14710178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
98, 36
               

               
Conread position:
               
92-356
               

               
Cow position:
               
chr2:15597278-15597542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
37, 52
               

               
Conread position:
               
92-356
               

               
Cow position:
               
chr2:16514997-16514717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
36, 67
               

               
Conread position:
               
92-356
               

               
Cow position:
               
chr2:19137686-19137961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
37, 71
               

               
Conread position:
               
92-356
               

               
Cow position:
               
chr2:29735031-29734755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 64
               

               
Conread position:
               
92-356
               

               
Cow position:
               
chr2:39067700-39067436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
158, 48
               

               
Conread position:
               
92-356
               

               
Cow position:
               
chr2:39590460-39590184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
37, 97
               

               
Conread position:
               
92-356
               

               
Cow position:
               
chr2:40257212-40257483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
98, 38
               

               
Conread position:
               
92-356
               

               
Cow position:
               
chr2:44482466-44482714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
172, 59
               

               
Conread position:
               
92-356
               

               
Cow position:
               
chr2:45624237-45623949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
11, 253
               

               
Conread position:
               
92-356
               

               
Cow position:
               
chr2:46033539-46033264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
32, 66
               

               
Conread position:
               
92-356
               

               
Cow position:
               
chr2:48130846-48130553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
68, 34
               

               
Conread position:
               
92-356
               

               
Cow position:
               
chr2:55632976-55632710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
47, 61
               

               
Conread position:
               
92-356
               

               
Cow position:
               
chr2:70896253-70895965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
34, 68
               

               
Conread position:
               
92-356
               

               
Cow position:
               
chr2:72309792-72310073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
34, 65
               

               
Conread position:
               
92-356
               

               
Cow position:
               
chr2:76861246-76861529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 68
               

               
Conread position:
               
93-263
               

               
Cow position:
               
chr2:46300806-46300645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
93-296
               

               
Cow position:
               
chr2:46053677-46053464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
33, 70
               

               
Conread position:
               
93-329
               

               
Cow position:
               
chr2:37619706-37619954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
31, 63
               

               
Conread position:
               
93-355
               

               
Cow position:
               
chr2:22042758-22042468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
33, 67
               

               
Conread position:
               
93-356
               

               
Cow position:
               
chr2:192280-192534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
68, 36
               

               
Conread position:
               
93-356
               

               
Cow position:
               
chr2:24594065-24593803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
219, 38
               

               
Conread position:
               
93-356
               

               
Cow position:
               
chr2:27337574-27337842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
80, 204
               

               
Conread position:
               
93-356
               

               
Cow position:
               
chr2:46383266-46383533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
97, 22
               

               
Conread position:
               
93-356
               

               
Cow position:
               
chr2:60462631-60462888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
36, 63
               

               
Conread position:
               
93-356
               

               
Cow position:
               
chr2:60468010-60468267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
36, 63
               

               
Conread position:
               
93-356
               

               
Cow position:
               
chr2:70908129-70908389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
36, 67
               

               
Conread position:
               
93-356
               

               
Cow position:
               
chr2:71624194-71624456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
36, 64
               

               
Conread position:
               
94-254
               

               
Cow position:
               
chr2:40319137-40318958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
94-256
               

               
Cow position:
               
chr2:55958883-55959042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
141, 55
               

               
Conread position:
               
94-260
               

               
Cow position:
               
chr2:16409667-16409509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
94-291
               

               
Cow position:
               
chr2:39642950-39642749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
35, 19
               

               
Conread position:
               
94-314
               

               
Cow position:
               
chr2:60260783-60261016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
94-352
               

               
Cow position:
               
chr2:19494417-19494147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
32, 66
               

               
Conread position:
               
94-353
               

               
Cow position:
               
chr2:21382646-21382918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
32, 66
               

               
Conread position:
               
94-353
               

               
Cow position:
               
chr2:46124485-46124768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
30, 59
               

               
Conread position:
               
94-354
               

               
Cow position:
               
chr2:65036091-65036351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
165, 46
               

               
Conread position:
               
94-356
               

               
Cow position:
               
chr2:18621615-18621339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
159, 62
               

               
Conread position:
               
94-356
               

               
Cow position:
               
chr2:39514241-39513956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
35, 64
               

               
Conread position:
               
94-356
               

               
Cow position:
               
chr2:40728562-40728285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
32, 95
               

               
Conread position:
               
94-356
               

               
Cow position:
               
chr2:47152342-47152601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
33, 66
               

               
Conread position:
               
94-356
               

               
Cow position:
               
chr2:53650218-53649954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
32, 59
               

               
Conread position:
               
94-356
               

               
Cow position:
               
chr2:61420955-61421236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
63, 57
               

               
Conread position:
               
95-267
               

               
Cow position:
               
chr2:30127088-30127260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
34, 84
               

               
Conread position:
               
95-317
               

               
Cow position:
               
chr2:44198082-44197855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
31, 65
               

               
Conread position:
               
95-337
               

               
Cow position:
               
chr2:80903723-80903957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
228, 12
               

               
Conread position:
               
95-352
               

               
Cow position:
               
chr2:41185652-41185408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
95-356
               

               
Cow position:
               
chr2:26438527-26438793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
108, 34
               

               
Conread position:
               
95-356
               

               
Cow position:
               
chr2:69366922-69367196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
91, 34
               

               
Conread position:
               
96-257
               

               
Cow position:
               
chr2:26302476-26302647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
36, 62
               

               
Conread position:
               
96-260
               

               
Cow position:
               
chr2:30384064-30384231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
31, 64
               

               
Conread position:
               
96-270
               

               
Cow position:
               
chr2:44063577-44063749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
33, 60
               

               
Conread position:
               
96-325
               

               
Cow position:
               
chr2:9725899-9726133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
32, 64
               

               
Conread position:
               
96-328
               

               
Cow position:
               
chr2:20900269-20900499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
105, 24
               

               
Conread position:
               
96-350
               

               
Cow position:
               
chr2:28726663-28726410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
58, 37
               

               
Conread position:
               
96-352
               

               
Cow position:
               
chr2:47008139-47008404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
53, 227
               

               
Conread position:
               
96-353
               

               
Cow position:
               
chr2:38662495-38662754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
34, 64
               

               
Conread position:
               
96-353
               

               
Cow position:
               
chr2:68190446-68190706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
170, 37
               

               
Conread position:
               
96-355
               

               
Cow position:
               
chr2:80177397-80177656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
161, 33
               

               
Conread position:
               
96-356
               

               
Cow position:
               
chr2:24271415-24271165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
30, 64
               

               
Conread position:
               
96-356
               

               
Cow position:
               
chr2:29801944-29802192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
209, 41
               

               
Conread position:
               
97-250
               

               
Cow position:
               
chr2:72612629-72612484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
97-260
               

               
Cow position:
               
chr2:5479503-5479656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
97-320
               

               
Cow position:
               
chr2:46351583-46351813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
156, 89
               

               
Conread position:
               
97-341
               

               
Cow position:
               
chr2:50766671-50766426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
29, 58
               

               
Conread position:
               
97-343
               

               
Cow position:
               
chr2:15872129-15871882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
28, 62
               

               
Conread position:
               
97-351
               

               
Cow position:
               
chr2:26851353-26851100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
161, 34
               

               
Conread position:
               
97-355
               

               
Cow position:
               
chr2:36963721-36963457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
32, 59
               

               
Conread position:
               
97-356
               

               
Cow position:
               
chr2:23270731-23270997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
32, 209
               

               
Conread position:
               
97-356
               

               
Cow position:
               
chr2:47115702-47115987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
29, 59
               

               
Conread position:
               
98-346
               

               
Cow position:
               
chr2:4644468-4644214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
31, 58
               

               
Conread position:
               
98-350
               

               
Cow position:
               
chr2:40410345-40410079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
31, 64
               

               
Conread position:
               
98-356
               

               
Cow position:
               
chr2:31460146-31460398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
168, 53
               

               
Conread position:
               
101-250
               

               
Cow position:
               
chr2:49932017-49931876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
101-260
               

               
Cow position:
               
chr2:46110860-46111017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
89, 14
               

               
Conread position:
               
101-260
               

               
Cow position:
               
chr2:78669727-78669888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
25, 56
               

               
Conread position:
               
101-284
               

               
Cow position:
               
chr2:64473160-64473343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
15, 48
               

               
Conread position:
               
101-315
               

               
Cow position:
               
chr2:24722081-24722296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
156, 50
               

               
Conread position:
               
101-356
               

               
Cow position:
               
chr2:16505274-16505543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
26, 57
               

               
Conread position:
               
101-356
               

               
Cow position:
               
chr2:42801231-42800976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
25, 59
               

               
Conread position:
               
101-356
               

               
Cow position:
               
chr2:45642297-45642558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
25, 54
               

               
Conread position:
               
101-356
               

               
Cow position:
               
chr2:73354002-73353725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
25, 59
               

               
Conread position:
               
103-326
               

               
Cow position:
               
chr2:38640512-38640287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
150, 71
               

               
Conread position:
               
105-240
               

               
Cow position:
               
chr2:6258162-6258290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
105-260
               

               
Cow position:
               
chr2:37224262-37224107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
52, 59
               

               
Conread position:
               
108-354
               

               
Cow position:
               
chr2:14734291-14734044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
61, 27
               

               
Conread position:
               
108-356
               

               
Cow position:
               
chr2:56846927-56846680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
14, 35
               

               
Conread position:
               
110-356
               

               
Cow position:
               
chr2:43835373-43835629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
73, 200
               

               
Conread position:
               
110-357
               

               
Cow position:
               
chr2:46051130-46051375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
20, 12
               

               
Conread position:
               
117-345
               

               
Cow position:
               
chr2:35988445-35988674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
136, 34
               

               
Conread position:
               
124-311
               

               
Cow position:
               
chr2:22370783-22370964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
135, 27
               

               
Conread position:
               
125-260
               

               
Cow position:
               
chr2:43139492-43139619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
125-290
               

               
Cow position:
               
chr2:11217961-11217792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
130, 26
               

               
Conread position:
               
125-296
               

               
Cow position:
               
chr2:39750279-39750109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
67, 26
               

               
Conread position:
               
125-317
               

               
Cow position:
               
chr2:1422514-1422324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
140, 26
               

               
Conread position:
               
125-317
               

               
Cow position:
               
chr2:7194371-7194184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
141, 10
               

               
Conread position:
               
125-320
               

               
Cow position:
               
chr2:60368496-60368286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
54, 26
               

               
Conread position:
               
125-330
               

               
Cow position:
               
chr2:81481008-81480809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
137, 26
               

               
Conread position:
               
125-333
               

               
Cow position:
               
chr2:38837351-38837561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
128, 26
               

               
Conread position:
               
125-355
               

               
Cow position:
               
chr2:69350405-69350635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
121, 26
               

               
Conread position:
               
125-356
               

               
Cow position:
               
chr2:78116197-78116414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
125-362
               

               
Cow position:
               
chr2:47443435-47443186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
52, 26
               

               
Conread position:
               
126-249
               

               
Cow position:
               
chr2:14313579-14313463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
126-259
               

               
Cow position:
               
chr2:61473926-61474061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
37, 25
               

               
Conread position:
               
126-260
               

               
Cow position:
               
chr2:17942850-17942984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
44, 26
               

               
Conread position:
               
126-261
               

               
Cow position:
               
chr2:45907714-45907586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
126-273
               

               
Cow position:
               
chr2:39350327-39350468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
131, 25
               

               
Conread position:
               
126-295
               

               
Cow position:
               
chr2:56837490-56837661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
127, 25
               

               
Conread position:
               
126-296
               

               
Cow position:
               
chr2:46317035-46316866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
135, 28
               

               
Conread position:
               
126-296
               

               
Cow position:
               
chr2:86540992-86541158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
141, 26
               

               
Conread position:
               
126-300
               

               
Cow position:
               
chr2:46125977-46126146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
131, 25
               

               
Conread position:
               
126-317
               

               
Cow position:
               
chr2:50566099-50565907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
121, 25
               

               
Conread position:
               
126-318
               

               
Cow position:
               
chr2:2827906-2827715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
142, 25
               

               
Conread position:
               
126-319
               

               
Cow position:
               
chr2:14349935-14349738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
120, 25
               

               
Conread position:
               
126-319
               

               
Cow position:
               
chr2:45510389-45510588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
64, 25
               

               
Conread position:
               
126-321
               

               
Cow position:
               
chr2:16669632-16669437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
135, 25
               

               
Conread position:
               
126-321
               

               
Cow position:
               
chr2:26805948-26806144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
64, 25
               

               
Conread position:
               
126-329
               

               
Cow position:
               
chr2:11631688-11631488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
103, 25
               

               
Conread position:
               
126-341
               

               
Cow position:
               
chr2:57565172-57565387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
135, 20
               

               
Conread position:
               
126-345
               

               
Cow position:
               
chr2:12682497-12682718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
135, 25
               

               
Conread position:
               
126-348
               

               
Cow position:
               
chr2:19502312-19502541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
36, 28
               

               
Conread position:
               
126-349
               

               
Cow position:
               
chr2:42970268-42970048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
124, 25
               

               
Conread position:
               
126-349
               

               
Cow position:
               
chr2:48525374-48525603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
117, 28
               

               
Conread position:
               
126-350
               

               
Cow position:
               
chr2:15058900-15059122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
132, 25
               

               
Conread position:
               
126-350
               

               
Cow position:
               
chr2:54968171-54967946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
135, 25
               

               
Conread position:
               
126-350
               

               
Cow position:
               
chr2:67386309-67386541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
133, 26
               

               
Conread position:
               
126-351
               

               
Cow position:
               
chr2:49862818-49862601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
125, 22
               

               
Conread position:
               
126-351
               

               
Cow position:
               
chr2:69250505-69250733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
135, 25
               

               
Conread position:
               
126-352
               

               
Cow position:
               
chr2:1709129-1708908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
131, 25
               

               
Conread position:
               
126-352
               

               
Cow position:
               
chr2:41711026-41710798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
30, 53
               

               
Conread position:
               
126-353
               

               
Cow position:
               
chr2:8843662-8843892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
126, 25
               

               
Conread position:
               
126-353
               

               
Cow position:
               
chr2:31355862-31355638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
135, 25
               

               
Conread position:
               
126-353
               

               
Cow position:
               
chr2:47065274-47065045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
135, 26
               

               
Conread position:
               
126-353
               

               
Cow position:
               
chr2:74249061-74249288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
127, 25
               

               
Conread position:
               
126-353
               

               
Cow position:
               
chr2:76313704-76313932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
134, 28
               

               
Conread position:
               
126-355
               

               
Cow position:
               
chr2:16428240-16428468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
132, 25
               

               
Conread position:
               
126-356
               

               
Cow position:
               
chr2:13582746-13582514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
14, 26
               

               
Conread position:
               
126-356
               

               
Cow position:
               
chr2:33988145-33988381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
32, 25
               

               
Conread position:
               
126-356
               

               
Cow position:
               
chr2:54700619-54700384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
135, 25
               

               
Conread position:
               
126-356
               

               
Cow position:
               
chr2:72528124-72527891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
134, 25
               

               
Conread position:
               
126-356
               

               
Cow position:
               
chr2:80116259-80116030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
135, 25
               

               
Conread position:
               
126-357
               

               
Cow position:
               
chr2:65932129-65931895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
136, 26
               

               
Conread position:
               
126-357
               

               
Cow position:
               
chr2:76110554-76110328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
135, 26
               

               
Conread position:
               
126-359
               

               
Cow position:
               
chr2:20791261-20791502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
44, 25
               

               
Conread position:
               
127-285
               

               
Cow position:
               
chr2:44032232-44032394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
63, 20
               

               
Conread position:
               
127-311
               

               
Cow position:
               
chr2:39095518-39095335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
138, 24
               

               
Conread position:
               
127-353
               

               
Cow position:
               
chr2:67745410-67745189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
63, 24
               

               
Conread position:
               
127-355
               

               
Cow position:
               
chr2:41040546-41040778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
130, 24
               

               
Conread position:
               
127-356
               

               
Cow position:
               
chr2:13354841-13354608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
89, 24
               

               
Conread position:
               
127-357
               

               
Cow position:
               
chr2:38646988-38647227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
46, 24
               

               
Conread position:
               
132-357
               

               
Cow position:
               
chr2:44025547-44025306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
17, 175
               

               
Conread position:
               
133-356
               

               
Cow position:
               
chr2:68870847-68870622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
127, 18
               

               
Conread position:
               
134-356
               

               
Cow position:
               
chr2:29860155-29859942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
171, 20
               

               
Conread position:
               
135-356
               

               
Cow position:
               
chr2:31500157-31499932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
118, 16
               

               
Conread position:
               
135-357
               

               
Cow position:
               
chr2:79138409-79138174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
5, 27
               

               
Conread position:
               
136-356
               

               
Cow position:
               
chr2:12558369-12558597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
13, 48
               

               
Conread position:
               
141-355
               

               
Cow position:
               
chr2:84970559-84970781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
49, 10
               

               
Conread position:
               
142-334
               

               
Cow position:
               
chr2:11840777-11840588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
14, 137
               

               
Conread position:
               
144-355
               

               
Cow position:
               
chr2:39584601-39584386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
46, 20
               

               
Conread position:
               
147-347
               

               
Cow position:
               
chr2:40880221-40880010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
16, 158
               

               
Conread position:
               
147-352
               

               
Cow position:
               
chr2:63331652-63331868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
147-354
               

               
Cow position:
               
chr2:4383747-4383962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
43, 23
               

               
Conread position:
               
147-354
               

               
Cow position:
               
chr2:38969364-38969572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
106, 33
               

               
Conread position:
               
151-356
               

               
Cow position:
               
chr2:28303468-28303257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
29, 157
               

               
Conread position:
               
153-355
               

               
Cow position:
               
chr2:23981726-23981531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
154-354
               

               
Cow position:
               
chr2:62644738-62644523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
154-356
               

               
Cow position:
               
chr2:47097809-47098003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
36, 78
               

               
Conread position:
               
154-356
               

               
Cow position:
               
chr2:62861733-62861521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
22, 35
               

               
Conread position:
               
155-318
               

               
Cow position:
               
chr2:85496194-85496359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
107, 26
               

               
Conread position:
               
155-322
               

               
Cow position:
               
chr2:23147547-23147727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
35, 155
               

               
Conread position:
               
155-328
               

               
Cow position:
               
chr2:44216577-44216397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
28, 166
               

               
Conread position:
               
155-353
               

               
Cow position:
               
chr2:77282162-77281955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
11, 50
               

               
Conread position:
               
155-355
               

               
Cow position:
               
chr2:24434137-24434349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
34, 155
               

               
Conread position:
               
155-355
               

               
Cow position:
               
chr2:44191622-44191411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
31, 50
               

               
Conread position:
               
155-356
               

               
Cow position:
               
chr2:39237556-39237348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
18, 37
               

               
Conread position:
               
155-356
               

               
Cow position:
               
chr2:39263630-39263426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
30, 148
               

               
Conread position:
               
155-356
               

               
Cow position:
               
chr2:39798385-39798171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
155-356
               

               
Cow position:
               
chr2:44081576-44081367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
95, 29
               

               
Conread position:
               
155-356
               

               
Cow position:
               
chr2:47073333-47073126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
155-356
               

               
Cow position:
               
chr2:53851579-53851368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
155-356
               

               
Cow position:
               
chr2:81927988-81927786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
150, 31
               

               
Conread position:
               
156-349
               

               
Cow position:
               
chr2:34918274-34918071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
157-338
               

               
Cow position:
               
chr2:46733794-46733978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
100, 22
               

               
Conread position:
               
157-356
               

               
Cow position:
               
chr2:85339316-85339529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
158-356
               

               
Cow position:
               
chr2:69747480-69747687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
95, 26
               

               
Conread position:
               
159-322
               

               
Cow position:
               
chr2:4445678-4445841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
102, 125
               

               
Conread position:
               
159-355
               

               
Cow position:
               
chr2:81388829-81388623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
160-322
               

               
Cow position:
               
chr2:64773518-64773352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
98, 20
               

               
Conread position:
               
160-350
               

               
Cow position:
               
chr2:36017276-36017477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
30, 141
               

               
Conread position:
               
160-356
               

               
Cow position:
               
chr2:3438075-3438280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
160-356
               

               
Cow position:
               
chr2:6901916-6901711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
160-356
               

               
Cow position:
               
chr2:32408371-32408558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
23, 107
               

               
Conread position:
               
160-356
               

               
Cow position:
               
chr2:70781229-70781029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
30, 149
               

               
Conread position:
               
161-341
               

               
Cow position:
               
chr2:21671648-21671467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
92, 18
               

               
Conread position:
               
161-356
               

               
Cow position:
               
chr2:870216-870414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
161-356
               

               
Cow position:
               
chr2:6697366-6697563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
22, 9
               

               
Conread position:
               
161-356
               

               
Cow position:
               
chr2:35136094-35135887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
12, 150
               

               
Conread position:
               
162-348
               

               
Cow position:
               
chr2:46055008-46055199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
27, 147
               

               
Conread position:
               
163-321
               

               
Cow position:
               
chr2:50353027-50352862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
163-356
               

               
Cow position:
               
chr2:39598098-39597895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
20, 40
               

               
Conread position:
               
163-356
               

               
Cow position:
               
chr2:58057195-58056999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
29, 40
               

               
Conread position:
               
164-353
               

               
Cow position:
               
chr2:40803133-40802937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
26, 19
               

               
Conread position:
               
164-356
               

               
Cow position:
               
chr2:64131556-64131353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
18, 119
               

               
Conread position:
               
165-356
               

               
Cow position:
               
chr2:41955016-41954816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
92, 21
               

               
Conread position:
               
165-356
               

               
Cow position:
               
chr2:55063008-55062818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
154, 8
               

               
Conread position:
               
166-356
               

               
Cow position:
               
chr2:9098583-9098785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
170-356
               

               
Cow position:
               
chr2:39815155-39815352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
13, 137
               

               
Conread position:
               
174-347
               

               
Cow position:
               
chr2:39409597-39409759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
16, 84
               

               
Conread position:
               
175-352
               

               
Cow position:
               
chr2:44005078-44004892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
15, 57
               

               
Conread position:
               
176-356
               

               
Cow position:
               
chr2:15674664-15674476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
7, 29
               

               
Conread position:
               
176-356
               

               
Cow position:
               
chr2:32446218-32446402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
14, 133
               

               
Conread position:
               
176-356
               

               
Cow position:
               
chr2:39564474-39564286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
85, 65
               

               
Conread position:
               
176-356
               

               
Cow position:
               
chr2:50580482-50580306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
86, 10
               

               
Conread position:
               
176-356
               

               
Cow position:
               
chr2:53532691-53532882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
86, 131
               

               
Conread position:
               
176-356
               

               
Cow position:
               
chr2:81348754-81348949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
14, 132
               

               
Conread position:
               
177-356
               

               
Cow position:
               
chr2:83410627-83410442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
13, 126
               

               
Conread position:
               
179-350
               

               
Cow position:
               
chr2:24726379-24726199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
11, 134
               

               
Conread position:
               
179-353
               

               
Cow position:
               
chr2:13271300-13271483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
13, 114
               

               
Conread position:
               
179-354
               

               
Cow position:
               
chr2:41461489-41461300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
179-355
               

               
Cow position:
               
chr2:40466754-40466567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
180-296
               

               
Cow position:
               
chr2:40058621-40058745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
180-352
               

               
Cow position:
               
chr2:43123457-43123274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
10, 138
               

               
Conread position:
               
180-354
               

               
Cow position:
               
chr2:61485740-61485559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
180-355
               

               
Cow position:
               
chr2:10655740-10655926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
82, 59
               

               
Conread position:
               
180-355
               

               
Cow position:
               
chr2:65890508-65890689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
10, 128
               

               
Conread position:
               
180-356
               

               
Cow position:
               
chr2:14854422-14854247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
71, 101
               

               
Conread position:
               
180-356
               

               
Cow position:
               
chr2:18858028-18858213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
76, 42
               

               
Conread position:
               
180-356
               

               
Cow position:
               
chr2:19062286-19062105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
10, 22
               

               
Conread position:
               
180-356
               

               
Cow position:
               
chr2:42255553-42255368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
10, 128
               

               
Conread position:
               
180-356
               

               
Cow position:
               
chr2:46230645-46230828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
12, 139
               

               
Conread position:
               
180-356
               

               
Cow position:
               
chr2:46971242-46971051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
10, 130
               

               
Conread position:
               
181-355
               

               
Cow position:
               
chr2:11697241-11697061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
71, 30
               

               
Conread position:
               
181-356
               

               
Cow position:
               
chr2:549214-549396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
181-356
               

               
Cow position:
               
chr2:60429396-60429211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
71, 37
               

               
Conread position:
               
182-317
               

               
Cow position:
               
chr2:86261907-86261766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
182-350
               

               
Cow position:
               
chr2:38205643-38205825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
182-352
               

               
Cow position:
               
chr2:14555636-14555814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
9, 115
               

               
Conread position:
               
182-352
               

               
Cow position:
               
chr2:23847719-23847891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
8, 68
               

               
Conread position:
               
182-353
               

               
Cow position:
               
chr2:16018117-16018296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
70, 124
               

               
Conread position:
               
182-354
               

               
Cow position:
               
chr2:13604584-13604402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
70, 124
               

               
Conread position:
               
182-356
               

               
Cow position:
               
chr2:21623-21803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
66, 22
               

               
Conread position:
               
182-356
               

               
Cow position:
               
chr2:15250297-15250111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
8, 52
               

               
Conread position:
               
182-356
               

               
Cow position:
               
chr2:39489890-39489711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
6, 102
               

               
Conread position:
               
182-356
               

               
Cow position:
               
chr2:47056022-47055839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
78, 122
               

               
Conread position:
               
182-356
               

               
Cow position:
               
chr2:51799212-51799392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
68, 119
               

               
Conread position:
               
184-356
               

               
Cow position:
               
chr2:22113584-22113770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
77, 20
               

               
Conread position:
               
185-356
               

               
Cow position:
               
chr2:30817080-30816895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
60, 118
               

               
Conread position:
               
186-288
               

               
Cow position:
               
chr2:25928632-25928530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
186-348
               

               
Cow position:
               
chr2:20362544-20362711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
186-348
               

               
Cow position:
               
chr2:64213173-64213002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
186-350
               

               
Cow position:
               
chr2:5130343-5130517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
30, 52
               

               
Conread position:
               
186-352
               

               
Cow position:
               
chr2:44232342-44232514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
186-354
               

               
Cow position:
               
chr2:69823701-69823522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
186-356
               

               
Cow position:
               
chr2:7524021-7524202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
186-356
               

               
Cow position:
               
chr2:13645429-13645252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
67, 13
               

               
Conread position:
               
186-356
               

               
Cow position:
               
chr2:13935818-13935637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
186-356
               

               
Cow position:
               
chr2:26102878-26102705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
74, 132
               

               
Conread position:
               
186-356
               

               
Cow position:
               
chr2:32416749-32416927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
67, 164
               

               
Conread position:
               
186-356
               

               
Cow position:
               
chr2:44222935-44222754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
186-356
               

               
Cow position:
               
chr2:44550738-44550910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
124, 67
               

               
Conread position:
               
186-356
               

               
Cow position:
               
chr2:45367404-45367222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
119, 112
               

               
Conread position:
               
186-356
               

               
Cow position:
               
chr2:80963539-80963714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
189-356
               

               
Cow position:
               
chr2:38273657-38273477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
69, 17
               

               
Conread position:
               
189-356
               

               
Cow position:
               
chr2:42293358-42293183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
73, 24
               

               
Conread position:
               
189-356
               

               
Cow position:
               
chr2:45439542-45439373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
18, 35
               

               
Conread position:
               
189-356
               

               
Cow position:
               
chr2:51638659-51638488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
28, 119
               

               
Conread position:
               
191-347
               

               
Cow position:
               
chr2:66149431-66149271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
62, 116
               

               
Conread position:
               
191-356
               

               
Cow position:
               
chr2:1487277-1487106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
66, 116
               

               
Conread position:
               
191-356
               

               
Cow position:
               
chr2:46194887-46194728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
105, 53
               

               
Conread position:
               
191-356
               

               
Cow position:
               
chr2:78197974-78197805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
69, 115
               

               
Conread position:
               
196-356
               

               
Cow position:
               
chr2:33262515-33262681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
70, 105
               

               
Conread position:
               
196-356
               

               
Cow position:
               
chr2:70945505-70945334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
66, 109
               

               
Conread position:
               
199-352
               

               
Cow position:
               
chr2:26880180-26880020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
209-353
               

               
Cow position:
               
chr2:8617931-8617783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
52, 118
               

               
Conread position:
               
209-356
               

               
Cow position:
               
chr2:988775-988626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
10, 136
               

               
Conread position:
               
209-356
               

               
Cow position:
               
chr2:16564765-16564620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
96, 14
               

               
Conread position:
               
212-356
               

               
Cow position:
               
chr2:21416382-21416237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
54, 92
               

               
Conread position:
               
220-352
               

               
Cow position:
               
chr2:70658783-70658923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
38, 85
               

               
Conread position:
               
239-356
               

               
Cow position:
               
chr2:7966151-7966031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
73, 106
               
Show alignments to all cow chromosomes.