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Cow genome map

           
Conread name:
           
mCP1-MI-P-CP1-nwt-d-02-0-UI.s1
        

               
Conread position:
               
10-330
               

               
Cow position:
               
chr20:24097318-24097002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
27, 20
               

               
Conread position:
               
58-328
               

               
Cow position:
               
chr20:23846386-23846660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
68, 42
               

               
Conread position:
               
76-296
               

               
Cow position:
               
chr20:30744456-30744685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
21, 84
               

               
Conread position:
               
76-317
               

               
Cow position:
               
chr20:23590489-23590732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
53, 25
               

               
Conread position:
               
76-349
               

               
Cow position:
               
chr20:19237334-19237059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
186, 56
               

               
Conread position:
               
77-314
               

               
Cow position:
               
chr20:35444844-35445085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
50, 80
               

               
Conread position:
               
79-281
               

               
Cow position:
               
chr20:41977900-41977709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
60, 51
               

               
Conread position:
               
79-311
               

               
Cow position:
               
chr20:34202900-34202655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
50, 21
               

               
Conread position:
               
79-356
               

               
Cow position:
               
chr20:11359379-11359655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 76
               

               
Conread position:
               
79-356
               

               
Cow position:
               
chr20:12581696-12581982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
47, 81
               

               
Conread position:
               
79-359
               

               
Cow position:
               
chr20:14490505-14490228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
18, 86
               

               
Conread position:
               
80-250
               

               
Cow position:
               
chr20:34467700-34467862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
7, 73
               

               
Conread position:
               
80-263
               

               
Cow position:
               
chr20:14922878-14922689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
103, 69
               

               
Conread position:
               
80-288
               

               
Cow position:
               
chr20:37358121-37357904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
18, 83
               

               
Conread position:
               
80-291
               

               
Cow position:
               
chr20:11920474-11920689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
49, 76
               

               
Conread position:
               
80-292
               

               
Cow position:
               
chr20:27315235-27315022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
46, 80
               

               
Conread position:
               
80-296
               

               
Cow position:
               
chr20:29990189-29990411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
22, 77
               

               
Conread position:
               
80-298
               

               
Cow position:
               
chr20:30639517-30639749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
20, 82
               

               
Conread position:
               
80-346
               

               
Cow position:
               
chr20:20967579-20967303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
27, 61
               

               
Conread position:
               
80-353
               

               
Cow position:
               
chr20:6238371-6238660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
71, 21
               

               
Conread position:
               
80-353
               

               
Cow position:
               
chr20:13829517-13829242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
46, 20
               

               
Conread position:
               
80-353
               

               
Cow position:
               
chr20:19328659-19328379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
17, 80
               

               
Conread position:
               
80-355
               

               
Cow position:
               
chr20:36779458-36779753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
15, 84
               

               
Conread position:
               
80-356
               

               
Cow position:
               
chr20:3141835-3141550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
22, 80
               

               
Conread position:
               
80-356
               

               
Cow position:
               
chr20:11135498-11135788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
30, 75
               

               
Conread position:
               
80-356
               

               
Cow position:
               
chr20:13023242-13023519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
22, 81
               

               
Conread position:
               
80-356
               

               
Cow position:
               
chr20:15548633-15548926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
46, 77
               

               
Conread position:
               
80-356
               

               
Cow position:
               
chr20:34097688-34097983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
22, 81
               

               
Conread position:
               
80-356
               

               
Cow position:
               
chr20:38515048-38514756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
46, 78
               

               
Conread position:
               
81-353
               

               
Cow position:
               
chr20:12534493-12534764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
59, 27
               

               
Conread position:
               
81-356
               

               
Cow position:
               
chr20:4944995-4945272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
45, 18
               

               
Conread position:
               
81-356
               

               
Cow position:
               
chr20:5814825-5814543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
16, 77
               

               
Conread position:
               
81-356
               

               
Cow position:
               
chr20:13652122-13652392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
176, 24
               

               
Conread position:
               
81-356
               

               
Cow position:
               
chr20:41704420-41704140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
44, 77
               

               
Conread position:
               
82-352
               

               
Cow position:
               
chr20:36741721-36741454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
9, 78
               

               
Conread position:
               
82-353
               

               
Cow position:
               
chr20:11548471-11548744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
186, 62
               

               
Conread position:
               
82-356
               

               
Cow position:
               
chr20:6240263-6240547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
47, 78
               

               
Conread position:
               
83-356
               

               
Cow position:
               
chr20:33532546-33532280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
70, 46
               

               
Conread position:
               
85-257
               

               
Cow position:
               
chr20:297750-297926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
41, 75
               

               
Conread position:
               
85-260
               

               
Cow position:
               
chr20:11822722-11822557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
85-290
               

               
Cow position:
               
chr20:2316173-2316383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
73, 44
               

               
Conread position:
               
85-290
               

               
Cow position:
               
chr20:3588914-3588686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
44, 73
               

               
Conread position:
               
85-350
               

               
Cow position:
               
chr20:6054252-6054535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
17, 60
               

               
Conread position:
               
85-353
               

               
Cow position:
               
chr20:12205492-12205757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
43, 15
               

               
Conread position:
               
85-353
               

               
Cow position:
               
chr20:23540917-23541179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
112, 54
               

               
Conread position:
               
85-356
               

               
Cow position:
               
chr20:24712095-24711810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
17, 72
               

               
Conread position:
               
85-356
               

               
Cow position:
               
chr20:34221735-34221455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
40, 16
               

               
Conread position:
               
86-349
               

               
Cow position:
               
chr20:5702964-5702703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
59, 31
               

               
Conread position:
               
86-356
               

               
Cow position:
               
chr20:3320888-3321167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
17, 33
               

               
Conread position:
               
86-356
               

               
Cow position:
               
chr20:15568712-15568971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
167, 14
               

               
Conread position:
               
86-356
               

               
Cow position:
               
chr20:16941031-16941316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
40, 14
               

               
Conread position:
               
86-362
               

               
Cow position:
               
chr20:21372548-21372275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
171, 18
               

               
Conread position:
               
88-315
               

               
Cow position:
               
chr20:12239444-12239664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
32, 22
               

               
Conread position:
               
88-352
               

               
Cow position:
               
chr20:8821491-8821745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
58, 50
               

               
Conread position:
               
88-353
               

               
Cow position:
               
chr20:6248348-6248626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
38, 72
               

               
Conread position:
               
88-353
               

               
Cow position:
               
chr20:13876462-13876727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
14, 68
               

               
Conread position:
               
88-356
               

               
Cow position:
               
chr20:5078887-5078598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
41, 73
               

               
Conread position:
               
88-356
               

               
Cow position:
               
chr20:14572126-14572385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
174, 51
               

               
Conread position:
               
88-356
               

               
Cow position:
               
chr20:21428409-21428134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
75, 41
               

               
Conread position:
               
90-354
               

               
Cow position:
               
chr20:747181-746923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
157, 39
               

               
Conread position:
               
91-294
               

               
Cow position:
               
chr20:21721468-21721248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
35, 68
               

               
Conread position:
               
92-253
               

               
Cow position:
               
chr20:27340560-27340401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
98, 56
               

               
Conread position:
               
92-294
               

               
Cow position:
               
chr20:21941673-21941472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
34, 65
               

               
Conread position:
               
92-297
               

               
Cow position:
               
chr20:21325572-21325361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
35, 68
               

               
Conread position:
               
92-310
               

               
Cow position:
               
chr20:14283170-14282942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
34, 68
               

               
Conread position:
               
92-328
               

               
Cow position:
               
chr20:11101649-11101418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
170, 47
               

               
Conread position:
               
92-352
               

               
Cow position:
               
chr20:7756390-7756646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
38, 56
               

               
Conread position:
               
92-352
               

               
Cow position:
               
chr20:9376709-9376447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
71, 53
               

               
Conread position:
               
92-355
               

               
Cow position:
               
chr20:39398729-39398461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
48, 61
               

               
Conread position:
               
92-356
               

               
Cow position:
               
chr20:11188576-11188824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
156, 59
               

               
Conread position:
               
92-356
               

               
Cow position:
               
chr20:14980260-14980539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
37, 68
               

               
Conread position:
               
92-356
               

               
Cow position:
               
chr20:20984244-20983971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
34, 74
               

               
Conread position:
               
92-363
               

               
Cow position:
               
chr20:30710396-30710668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
166, 60
               

               
Conread position:
               
93-259
               

               
Cow position:
               
chr20:8021383-8021206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
33, 67
               

               
Conread position:
               
93-260
               

               
Cow position:
               
chr20:5078523-5078351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
34, 66
               

               
Conread position:
               
93-260
               

               
Cow position:
               
chr20:16977591-16977765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
33, 67
               

               
Conread position:
               
93-356
               

               
Cow position:
               
chr20:3599156-3599420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 64
               

               
Conread position:
               
93-356
               

               
Cow position:
               
chr20:12420373-12420645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
36, 67
               

               
Conread position:
               
93-356
               

               
Cow position:
               
chr20:14807129-14806860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
33, 67
               

               
Conread position:
               
93-356
               

               
Cow position:
               
chr20:21345685-21345402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
33, 68
               

               
Conread position:
               
93-357
               

               
Cow position:
               
chr20:35207958-35208234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
62, 56
               

               
Conread position:
               
94-226
               

               
Cow position:
               
chr20:29770303-29770436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
68, 53
               

               
Conread position:
               
94-250
               

               
Cow position:
               
chr20:34881158-34881308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
32, 61
               

               
Conread position:
               
94-260
               

               
Cow position:
               
chr20:31078031-31077860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
31, 57
               

               
Conread position:
               
95-260
               

               
Cow position:
               
chr20:2823114-2822949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
32, 20
               

               
Conread position:
               
95-260
               

               
Cow position:
               
chr20:37228823-37229005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
95-356
               

               
Cow position:
               
chr20:4334293-4334550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
8, 35
               

               
Conread position:
               
95-356
               

               
Cow position:
               
chr20:7441898-7442153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
30, 62
               

               
Conread position:
               
95-356
               

               
Cow position:
               
chr20:21019802-21019539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
33, 58
               

               
Conread position:
               
96-353
               

               
Cow position:
               
chr20:5950397-5950664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
29, 64
               

               
Conread position:
               
96-354
               

               
Cow position:
               
chr20:4755591-4755855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
30, 64
               

               
Conread position:
               
96-356
               

               
Cow position:
               
chr20:5645019-5644761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
64, 31
               

               
Conread position:
               
96-356
               

               
Cow position:
               
chr20:20099359-20099622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
29, 57
               

               
Conread position:
               
96-356
               

               
Cow position:
               
chr20:20124788-20125056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
33, 82
               

               
Conread position:
               
97-290
               

               
Cow position:
               
chr20:19834589-19834788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
32, 58
               

               
Conread position:
               
97-319
               

               
Cow position:
               
chr20:15530102-15529874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
29, 60
               

               
Conread position:
               
97-358
               

               
Cow position:
               
chr20:5009974-5009707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
81, 110
               

               
Conread position:
               
98-319
               

               
Cow position:
               
chr20:5703713-5703484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
28, 59
               

               
Conread position:
               
98-355
               

               
Cow position:
               
chr20:6372323-6372587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
164, 53
               

               
Conread position:
               
101-260
               

               
Cow position:
               
chr20:26790362-26790532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
28, 59
               

               
Conread position:
               
101-349
               

               
Cow position:
               
chr20:11008411-11008150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
24, 59
               

               
Conread position:
               
101-350
               

               
Cow position:
               
chr20:22959113-22959363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
14, 53
               

               
Conread position:
               
101-355
               

               
Cow position:
               
chr20:5998423-5998697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
20, 55
               

               
Conread position:
               
106-355
               

               
Cow position:
               
chr20:26723446-26723699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
61, 35
               

               
Conread position:
               
108-293
               

               
Cow position:
               
chr20:36671200-36671393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
50, 43
               

               
Conread position:
               
108-349
               

               
Cow position:
               
chr20:38578529-38578781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
71, 21
               

               
Conread position:
               
109-355
               

               
Cow position:
               
chr20:40782188-40781943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
152, 39
               

               
Conread position:
               
110-354
               

               
Cow position:
               
chr20:15822779-15822529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
48, 21
               

               
Conread position:
               
114-347
               

               
Cow position:
               
chr20:38551585-38551357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
72, 37
               

               
Conread position:
               
116-356
               

               
Cow position:
               
chr20:15565598-15565851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
8, 133
               

               
Conread position:
               
122-289
               

               
Cow position:
               
chr20:15515222-15515390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
55, 29
               

               
Conread position:
               
125-353
               

               
Cow position:
               
chr20:354693-354919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
142, 26
               

               
Conread position:
               
125-356
               

               
Cow position:
               
chr20:29845260-29845024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
127, 26
               

               
Conread position:
               
126-311
               

               
Cow position:
               
chr20:5365133-5364951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
141, 25
               

               
Conread position:
               
126-319
               

               
Cow position:
               
chr20:14433216-14433409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
127, 25
               

               
Conread position:
               
126-335
               

               
Cow position:
               
chr20:360973-361190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
44, 25
               

               
Conread position:
               
126-347
               

               
Cow position:
               
chr20:40422894-40423119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
137, 25
               

               
Conread position:
               
126-350
               

               
Cow position:
               
chr20:20739066-20739306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
34, 25
               

               
Conread position:
               
126-351
               

               
Cow position:
               
chr20:17251923-17251695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
135, 25
               

               
Conread position:
               
126-352
               

               
Cow position:
               
chr20:9266896-9267129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
64, 18
               

               
Conread position:
               
126-352
               

               
Cow position:
               
chr20:39417698-39417917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
131, 25
               

               
Conread position:
               
126-353
               

               
Cow position:
               
chr20:8429947-8429727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
142, 25
               

               
Conread position:
               
126-353
               

               
Cow position:
               
chr20:34083925-34083697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
127, 25
               

               
Conread position:
               
126-353
               

               
Cow position:
               
chr20:38847023-38847254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
118, 25
               

               
Conread position:
               
126-355
               

               
Cow position:
               
chr20:12085222-12085449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
58, 25
               

               
Conread position:
               
126-355
               

               
Cow position:
               
chr20:33067155-33067390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
127, 25
               

               
Conread position:
               
126-356
               

               
Cow position:
               
chr20:4621137-4621370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
30, 25
               

               
Conread position:
               
126-356
               

               
Cow position:
               
chr20:7550438-7550213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
60, 25
               

               
Conread position:
               
126-356
               

               
Cow position:
               
chr20:12995789-12996036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
47, 115
               

               
Conread position:
               
126-356
               

               
Cow position:
               
chr20:16548068-16548303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
135, 25
               

               
Conread position:
               
126-356
               

               
Cow position:
               
chr20:28594497-28594257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
73, 19
               

               
Conread position:
               
126-356
               

               
Cow position:
               
chr20:33976693-33976456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
121, 26
               

               
Conread position:
               
126-356
               

               
Cow position:
               
chr20:41089588-41089820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
121, 25
               

               
Conread position:
               
127-354
               

               
Cow position:
               
chr20:18392054-18392284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
56, 158
               

               
Conread position:
               
128-350
               

               
Cow position:
               
chr20:10200551-10200323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
130, 23
               

               
Conread position:
               
128-352
               

               
Cow position:
               
chr20:9923772-9923561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
28, 52
               

               
Conread position:
               
128-356
               

               
Cow position:
               
chr20:32463323-32463547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
125, 23
               

               
Conread position:
               
129-354
               

               
Cow position:
               
chr20:14100226-14100457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
61, 43
               

               
Conread position:
               
132-356
               

               
Cow position:
               
chr20:22485060-22484837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
121, 19
               

               
Conread position:
               
134-356
               

               
Cow position:
               
chr20:38090112-38089886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
115, 17
               

               
Conread position:
               
140-356
               

               
Cow position:
               
chr20:29805459-29805687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
50, 93
               

               
Conread position:
               
148-350
               

               
Cow position:
               
chr20:30119386-30119590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
15, 44
               

               
Conread position:
               
148-356
               

               
Cow position:
               
chr20:23064643-23064856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
154-356
               

               
Cow position:
               
chr20:6890890-6890689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
108, 30
               

               
Conread position:
               
155-296
               

               
Cow position:
               
chr20:11444260-11444115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
35, 123
               

               
Conread position:
               
155-345
               

               
Cow position:
               
chr20:35460359-35460556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
74, 28
               

               
Conread position:
               
155-353
               

               
Cow position:
               
chr20:39728636-39728426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
35, 72
               

               
Conread position:
               
155-354
               

               
Cow position:
               
chr20:33438795-33438999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
28, 193
               

               
Conread position:
               
155-355
               

               
Cow position:
               
chr20:580737-580948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
98, 31
               

               
Conread position:
               
155-356
               

               
Cow position:
               
chr20:21714953-21714730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
28, 165
               

               
Conread position:
               
155-356
               

               
Cow position:
               
chr20:23870634-23870846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
157-319
               

               
Cow position:
               
chr20:23678532-23678704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
33, 151
               

               
Conread position:
               
157-351
               

               
Cow position:
               
chr20:5385560-5385760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
21, 147
               

               
Conread position:
               
157-355
               

               
Cow position:
               
chr20:20056305-20056509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
100, 26
               

               
Conread position:
               
157-356
               

               
Cow position:
               
chr20:34777359-34777154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
100, 17
               

               
Conread position:
               
159-323
               

               
Cow position:
               
chr20:11038751-11038590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
94, 21
               

               
Conread position:
               
160-326
               

               
Cow position:
               
chr20:35591467-35591641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
30, 162
               

               
Conread position:
               
160-356
               

               
Cow position:
               
chr20:21815741-21815535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
30, 191
               

               
Conread position:
               
161-348
               

               
Cow position:
               
chr20:40158079-40157883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
29, 145
               

               
Conread position:
               
162-356
               

               
Cow position:
               
chr20:7709604-7709811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
100, 143
               

               
Conread position:
               
162-356
               

               
Cow position:
               
chr20:23506290-23506495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
35, 146
               

               
Conread position:
               
162-356
               

               
Cow position:
               
chr20:41883908-41883709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
27, 79
               

               
Conread position:
               
163-354
               

               
Cow position:
               
chr20:17846133-17845934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
94, 20
               

               
Conread position:
               
164-314
               

               
Cow position:
               
chr20:13943934-13943783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
165-356
               

               
Cow position:
               
chr20:36633985-36633793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
88, 16
               

               
Conread position:
               
168-355
               

               
Cow position:
               
chr20:35797778-35797584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
98, 27
               

               
Conread position:
               
170-356
               

               
Cow position:
               
chr20:16492238-16492046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
92, 11
               

               
Conread position:
               
178-352
               

               
Cow position:
               
chr20:35146183-35146000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
12, 28
               

               
Conread position:
               
179-350
               

               
Cow position:
               
chr20:9537293-9537117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
11, 120
               

               
Conread position:
               
180-356
               

               
Cow position:
               
chr20:1576256-1576067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
180-356
               

               
Cow position:
               
chr20:19751467-19751282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
10, 126
               

               
Conread position:
               
180-356
               

               
Cow position:
               
chr20:34108264-34108086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
70, 126
               

               
Conread position:
               
181-352
               

               
Cow position:
               
chr20:13025452-13025637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
181-356
               

               
Cow position:
               
chr20:6424129-6423946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
13, 124
               

               
Conread position:
               
181-356
               

               
Cow position:
               
chr20:33144395-33144578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
181-356
               

               
Cow position:
               
chr20:38768305-38768482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
72, 151
               

               
Conread position:
               
182-355
               

               
Cow position:
               
chr20:6603199-6603015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
182-356
               

               
Cow position:
               
chr20:9433744-9433560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
80, 123
               

               
Conread position:
               
186-356
               

               
Cow position:
               
chr20:5636634-5636458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
72, 119
               

               
Conread position:
               
186-356
               

               
Cow position:
               
chr20:6096342-6096519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
186-356
               

               
Cow position:
               
chr20:10772360-10772178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
14, 63
               

               
Conread position:
               
186-356
               

               
Cow position:
               
chr20:40511603-40511784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
66, 123
               

               
Conread position:
               
188-354
               

               
Cow position:
               
chr20:24834240-24834070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
136, 152
               

               
Conread position:
               
189-350
               

               
Cow position:
               
chr20:36040625-36040454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
50, 164
               

               
Conread position:
               
189-357
               

               
Cow position:
               
chr20:311470-311307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
63, 111
               

               
Conread position:
               
190-356
               

               
Cow position:
               
chr20:11481986-11482160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
66, 24
               

               
Conread position:
               
190-356
               

               
Cow position:
               
chr20:15235901-15235743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
191-356
               

               
Cow position:
               
chr20:14759517-14759686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
66, 116
               

               
Conread position:
               
191-357
               

               
Cow position:
               
chr20:21929053-21928879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
66, 119
               

               
Conread position:
               
208-355
               

               
Cow position:
               
chr20:24000665-24000822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
26, 100
               

               
Conread position:
               
209-351
               

               
Cow position:
               
chr20:32447405-32447265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
129, 51
               

               
Conread position:
               
209-354
               

               
Cow position:
               
chr20:17765201-17765352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
53, 95
               

               
Conread position:
               
214-355
               

               
Cow position:
               
chr20:13795102-13794962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
49, 15
               

               
Conread position:
               
229-356
               

               
Cow position:
               
chr20:11514781-11514904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
26, 86
               
Show alignments to all cow chromosomes.