Cow genome map
| Conread name: | mCP1-MI-P-CP1-nzb-b-14-0-UI.s1 |
| Conread position: | 1-97 |
| Cow position: | chr6:26054757-26054661 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 80 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-100 |
| Cow position: | chr6:15111692-15111593 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 82 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-106 |
| Cow position: | chr6:12711650-12711543 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 1-106 |
| Cow position: | chr6:17313881-17313988 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 90 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 3-96 |
| Cow position: | chr6:8187042-8186949 (view UCSC Genome Browser custom track) |
| Alignm length: | 94 |
| Alignm identity: | 83 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-97 |
| Cow position: | chr6:16738760-16738854 (view UCSC Genome Browser custom track) |
| Alignm length: | 95 |
| Alignm identity: | 81 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-97 |
| Cow position: | chr6:28562023-28561929 (view UCSC Genome Browser custom track) |
| Alignm length: | 95 |
| Alignm identity: | 79 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-106 |
| Cow position: | chr6:19936423-19936318 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 88 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 3-106 |
| Cow position: | chr6:45159910-45159806 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 91 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 3-117 |
| Cow position: | chr6:16411758-16411873 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 94 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 93, 107 |
| Conread position: | 3-117 |
| Cow position: | chr6:51019296-51019410 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 91 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-95 |
| Cow position: | chr6:35163763-35163854 (view UCSC Genome Browser custom track) |
| Alignm length: | 92 |
| Alignm identity: | 78 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-104 |
| Cow position: | chr6:24110430-24110532 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 85 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 4-106 |
| Cow position: | chr6:5330560-5330662 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 84 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-106 |
| Cow position: | chr6:53138791-53138690 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 84 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 4-106 |
| Cow position: | chr6:67574536-67574638 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 86 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-109 |
| Cow position: | chr6:16137621-16137514 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 87 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 4-109 |
| Cow position: | chr6:62437563-62437668 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 86 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-116 |
| Cow position: | chr6:23381520-23381409 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 95 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 4-117 |
| Cow position: | chr6:49685966-49686076 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 4-118 |
| Cow position: | chr6:14263743-14263629 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 89 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-118 |
| Cow position: | chr6:15587446-15587333 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 90 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 4-118 |
| Cow position: | chr6:16016181-16016296 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 89, 106 |
| Conread position: | 4-118 |
| Cow position: | chr6:18447369-18447255 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 91 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-118 |
| Cow position: | chr6:31928785-31928898 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 93 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 4-121 |
| Cow position: | chr6:22876782-22876668 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 4-126 |
| Cow position: | chr6:26929297-26929175 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-120 |
| Cow position: | chr6:44544000-44543890 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 7-106 |
| Cow position: | chr6:63251772-63251673 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 82 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 15-126 |
| Cow position: | chr6:16762472-16762359 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 78, 95 |
| Conread position: | 15-130 |
| Cow position: | chr6:32458763-32458879 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 91 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 103, 0 |
Show alignments to all cow chromosomes.