Cow genome map


           Conread name:
           mCP1-MI-P-CP1-nzb-e-11-0-UI.s1
        

               Conread position:
               438-684
               

               Cow position:
               chr18:47471867-47471631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               200, 7
               

               Conread position:
               439-689
               

               Cow position:
               chr18:13353978-13354238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               200
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               56, 10
               

               Conread position:
               442-612
               

               Cow position:
               chr18:53284386-53284552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               445-681
               

               Cow position:
               chr18:18792148-18792385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               202, 0
               

               Conread position:
               445-690
               

               Cow position:
               chr18:26458653-26458416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               188, 157
               

               Conread position:
               445-694
               

               Cow position:
               chr18:23382237-23381976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               194
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               55, 164
               

               Conread position:
               445-694
               

               Cow position:
               chr18:32035750-32035495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               195
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               56, 118
               

               Conread position:
               446-606
               

               Cow position:
               chr18:26509953-26510104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               454-700
               

               Cow position:
               chr18:1579614-1579860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               51, 100
               
Show alignments to all cow chromosomes.