Cow genome map


           Conread name:
           mCP1-MI-P-CP1-nzb-e-11-0-UI.s1
        

               Conread position:
               27-247
               

               Cow position:
               chr9:45292142-45291914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               170, 155
               

               Conread position:
               433-696
               

               Cow position:
               chr9:24927667-24927933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               190
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               15, 127
               

               Conread position:
               439-644
               

               Cow position:
               chr9:29001630-29001848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               112, 10
               

               Conread position:
               439-683
               

               Cow position:
               chr9:23866872-23867120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               180
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               66, 7
               

               Conread position:
               439-689
               

               Cow position:
               chr9:38755803-38755563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               187
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               207, 10
               

               Conread position:
               445-689
               

               Cow position:
               chr9:16488104-16488335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               445-693
               

               Cow position:
               chr9:43482284-43482040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               158, 73
               

               Conread position:
               476-689
               

               Cow position:
               chr9:52392615-52392407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               162, 0
               
Show alignments to all cow chromosomes.