Cow genome map
| Conread name: | mE3-MI-P-E3-aal-d-12-1-UM.s1 |
| Conread position: | 1-229 |
| Cow position: | chr1:45535672-45535441 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 20, 65 |
| Conread position: | 9-196 |
| Cow position: | chr1:64804146-64804336 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 54, 87 |
| Conread position: | 9-196 |
| Cow position: | chr1:79278488-79278670 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 12, 57 |
| Conread position: | 9-229 |
| Cow position: | chr1:21835902-21835685 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 17, 55 |
| Conread position: | 9-253 |
| Cow position: | chr1:34000871-34000620 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 188 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 12, 57 |
| Conread position: | 9-282 |
| Cow position: | chr1:63434847-63435117 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 204 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 12, 76 |
| Conread position: | 9-381 |
| Cow position: | chr1:41697017-41696648 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 57 |
| Conread position: | 17-229 |
| Cow position: | chr1:54478272-54478061 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 139, 89 |
| Conread position: | 18-228 |
| Cow position: | chr1:74084248-74084449 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 52, 95 |
| Conread position: | 18-229 |
| Cow position: | chr1:43505471-43505262 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 47, 60 |
| Conread position: | 18-246 |
| Cow position: | chr1:72286110-72286327 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 172 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 51, 45 |
| Conread position: | 18-257 |
| Cow position: | chr1:91142207-91142444 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 173 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 53, 85 |
| Conread position: | 18-264 |
| Cow position: | chr1:81613336-81613089 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 183 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 45, 60 |
| Conread position: | 18-273 |
| Cow position: | chr1:47008978-47008727 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 51, 43 |
| Conread position: | 18-315 |
| Cow position: | chr1:69695045-69695353 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 45, 104 |
| Conread position: | 18-318 |
| Cow position: | chr1:100706080-100705786 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 216 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 45, 81 |
| Conread position: | 18-333 |
| Cow position: | chr1:84239166-84239451 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 51, 45 |
| Conread position: | 18-375 |
| Cow position: | chr1:61391842-61392200 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 45 |
| Conread position: | 18-386 |
| Cow position: | chr1:12595957-12596322 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 60 |
| Conread position: | 18-386 |
| Cow position: | chr1:21787277-21786900 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 45 |
| Conread position: | 18-386 |
| Cow position: | chr1:31934459-31934089 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 45 |
| Conread position: | 18-386 |
| Cow position: | chr1:61564743-61564375 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 60 |
| Conread position: | 18-399 |
| Cow position: | chr1:44165029-44164645 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 33 |
| Conread position: | 19-203 |
| Cow position: | chr1:19545153-19545334 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 53, 43 |
| Conread position: | 19-208 |
| Cow position: | chr1:95057002-95056815 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 7, 45 |
| Conread position: | 20-220 |
| Cow position: | chr1:78810984-78810784 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 137, 179 |
| Conread position: | 20-268 |
| Cow position: | chr1:33811874-33811634 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 49, 43 |
| Conread position: | 25-334 |
| Cow position: | chr1:99118329-99118023 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 29, 14 |
| Conread position: | 25-399 |
| Cow position: | chr1:57575819-57576193 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 37 |
| Conread position: | 25-399 |
| Cow position: | chr1:95017579-95017948 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 62 |
| Conread position: | 26-218 |
| Cow position: | chr1:81563675-81563483 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 46, 37 |
| Conread position: | 70-400 |
| Cow position: | chr1:2317743-2318070 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 137 |
Show alignments to all cow chromosomes.