Cow genome map
| Conread name: | mE3-MI-P-E3-aal-d-12-1-UM.s1 |
| Conread position: | 9-228 |
| Cow position: | chr10:67627069-67627276 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 59, 54 |
| Conread position: | 9-283 |
| Cow position: | chr10:11213041-11212751 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 204 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 54, 69 |
| Conread position: | 9-334 |
| Cow position: | chr10:24871817-24871473 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 250 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 12, 57 |
| Conread position: | 9-356 |
| Cow position: | chr10:36002125-36001788 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 70 |
| Conread position: | 9-386 |
| Cow position: | chr10:10720744-10721133 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 57 |
| Conread position: | 9-390 |
| Cow position: | chr10:9675531-9675908 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 37 |
| Conread position: | 9-399 |
| Cow position: | chr10:9445085-9445463 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 277 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 12, 49 |
| Conread position: | 13-200 |
| Cow position: | chr10:28176467-28176656 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 8, 66 |
| Conread position: | 14-240 |
| Cow position: | chr10:51696664-51696452 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 7, 50 |
| Conread position: | 16-386 |
| Cow position: | chr10:52278648-52278275 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 10 |
| Conread position: | 18-218 |
| Cow position: | chr10:9798281-9798474 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 51, 45 |
| Conread position: | 18-228 |
| Cow position: | chr10:37235633-37235842 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 51, 45 |
| Conread position: | 18-228 |
| Cow position: | chr10:38014282-38014082 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 51, 45 |
| Conread position: | 18-229 |
| Cow position: | chr10:35857138-35857346 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 51, 45 |
| Conread position: | 18-229 |
| Cow position: | chr10:41941660-41941872 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 51, 45 |
| Conread position: | 18-245 |
| Cow position: | chr10:15462406-15462190 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 138, 93 |
| Conread position: | 18-366 |
| Cow position: | chr10:54477023-54476677 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 45 |
| Conread position: | 18-380 |
| Cow position: | chr10:7366869-7367239 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 45 |
| Conread position: | 18-381 |
| Cow position: | chr10:32775024-32774672 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 8 |
| Conread position: | 18-382 |
| Cow position: | chr10:10148571-10148185 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 60 |
| Conread position: | 18-386 |
| Cow position: | chr10:3998820-3998465 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 45 |
| Conread position: | 18-386 |
| Cow position: | chr10:30352764-30352387 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 60 |
| Conread position: | 18-390 |
| Cow position: | chr10:37818640-37819012 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 45 |
| Conread position: | 18-399 |
| Cow position: | chr10:31027729-31028116 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 274 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 45, 51 |
| Conread position: | 18-399 |
| Cow position: | chr10:37529349-37529742 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 60 |
| Conread position: | 25-226 |
| Cow position: | chr10:23056169-23056367 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 38, 53 |
| Conread position: | 25-305 |
| Cow position: | chr10:57786249-57785968 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 131, 105 |
| Conread position: | 25-382 |
| Cow position: | chr10:8404124-8403747 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 38 |
Show alignments to all cow chromosomes.