Cow genome map
| Conread name: | mE3-MI-P-E3-aal-d-12-1-UM.s1 |
| Conread position: | 1-314 |
| Cow position: | chr11:70483916-70484234 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 64 |
| Conread position: | 1-376 |
| Cow position: | chr11:65409212-65409597 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 65 |
| Conread position: | 9-226 |
| Cow position: | chr11:48474638-48474425 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 12, 106 |
| Conread position: | 9-229 |
| Cow position: | chr11:48932650-48932869 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 12, 57 |
| Conread position: | 9-252 |
| Cow position: | chr11:25319988-25319742 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 12, 57 |
| Conread position: | 9-386 |
| Cow position: | chr11:76114586-76114210 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 102 |
| Conread position: | 17-364 |
| Cow position: | chr11:4412091-4412441 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 46 |
| Conread position: | 18-207 |
| Cow position: | chr11:47545053-47544863 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 18-228 |
| Cow position: | chr11:38194077-38193866 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 48, 60 |
| Conread position: | 18-229 |
| Cow position: | chr11:25165365-25165159 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 138, 93 |
| Conread position: | 18-229 |
| Cow position: | chr11:65826819-65827020 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 160 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 51, 45 |
| Conread position: | 18-291 |
| Cow position: | chr11:47165217-47165482 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 196 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 51, 45 |
| Conread position: | 18-301 |
| Cow position: | chr11:35684572-35684857 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 60 |
| Conread position: | 18-305 |
| Cow position: | chr11:38236166-38235875 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 214 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 45, 60 |
| Conread position: | 18-334 |
| Cow position: | chr11:44642364-44642672 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 60 |
| Conread position: | 18-338 |
| Cow position: | chr11:71846423-71846744 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 0 |
| Conread position: | 18-386 |
| Cow position: | chr11:42793050-42793402 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 44 |
| Conread position: | 19-354 |
| Cow position: | chr11:70838371-70838708 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 97 |
| Conread position: | 20-227 |
| Cow position: | chr11:18210425-18210633 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 145 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 49, 43 |
| Conread position: | 25-280 |
| Cow position: | chr11:59155963-59156212 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 38, 53 |
| Conread position: | 25-399 |
| Cow position: | chr11:64044157-64043793 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 38 |
| Conread position: | 42-293 |
| Cow position: | chr11:53925663-53925411 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 182 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 114, 145 |
Show alignments to all cow chromosomes.