Cow genome map
| Conread name: | mE3-MI-P-E3-aal-d-12-1-UM.s1 |
| Conread position: | 1-377 |
| Cow position: | chr17:21959685-21960053 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 114 |
| Conread position: | 1-386 |
| Cow position: | chr17:30665273-30664891 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 101 |
| Conread position: | 9-164 |
| Cow position: | chr17:7142856-7142702 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 54, 104 |
| Conread position: | 9-218 |
| Cow position: | chr17:25097456-25097247 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 12, 134 |
| Conread position: | 9-219 |
| Cow position: | chr17:11156498-11156710 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 17, 70 |
| Conread position: | 9-315 |
| Cow position: | chr17:9117640-9117335 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 72 |
| Conread position: | 9-386 |
| Cow position: | chr17:12059101-12059476 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 57 |
| Conread position: | 9-399 |
| Cow position: | chr17:4601553-4601939 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 38 |
| Conread position: | 16-399 |
| Cow position: | chr17:1410257-1410641 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 10 |
| Conread position: | 18-220 |
| Cow position: | chr17:20835578-20835375 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 54, 45 |
| Conread position: | 18-220 |
| Cow position: | chr17:29040484-29040684 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 138, 93 |
| Conread position: | 18-229 |
| Cow position: | chr17:9746496-9746294 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 45, 60 |
| Conread position: | 18-247 |
| Cow position: | chr17:18495539-18495752 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 45, 60 |
| Conread position: | 18-267 |
| Cow position: | chr17:42347244-42347486 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 138, 59 |
| Conread position: | 18-268 |
| Cow position: | chr17:31481054-31481305 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 45, 194 |
| Conread position: | 18-295 |
| Cow position: | chr17:13244059-13244313 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 54, 45 |
| Conread position: | 18-334 |
| Cow position: | chr17:24580315-24580613 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 230 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 45, 60 |
| Conread position: | 18-383 |
| Cow position: | chr17:13922460-13922098 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 60 |
| Conread position: | 18-390 |
| Cow position: | chr17:20993058-20993430 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 86 |
| Conread position: | 18-392 |
| Cow position: | chr17:13143709-13144072 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 45 |
| Conread position: | 18-399 |
| Cow position: | chr17:20780492-20780122 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 45 |
| Conread position: | 18-399 |
| Cow position: | chr17:30539271-30539646 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 45 |
| Conread position: | 25-194 |
| Cow position: | chr17:4436258-4436423 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 47, 38 |
| Conread position: | 27-214 |
| Cow position: | chr17:21710478-21710293 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 42, 36 |
Show alignments to all cow chromosomes.