Cow genome map
| Conread name: | mE3-MI-P-E3-aal-d-12-1-UM.s1 |
| Conread position: | 5-303 |
| Cow position: | chr2:1300436-1300721 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 64, 18 |
| Conread position: | 5-374 |
| Cow position: | chr2:38273502-38273127 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 265 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 16, 104 |
| Conread position: | 5-386 |
| Cow position: | chr2:11806280-11805895 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 61 |
| Conread position: | 9-268 |
| Cow position: | chr2:46033285-46033018 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 11, 72 |
| Conread position: | 9-378 |
| Cow position: | chr2:39662654-39662281 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 57 |
| Conread position: | 9-382 |
| Cow position: | chr2:40691442-40691060 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 57 |
| Conread position: | 9-386 |
| Cow position: | chr2:45912681-45913059 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 57 |
| Conread position: | 9-386 |
| Cow position: | chr2:48617935-48617547 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 57 |
| Conread position: | 10-229 |
| Cow position: | chr2:45311171-45311394 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 11-302 |
| Cow position: | chr2:76969226-76969516 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 13 |
| Conread position: | 16-211 |
| Cow position: | chr2:46331002-46330807 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 47, 10 |
| Conread position: | 17-395 |
| Cow position: | chr2:71163771-71164152 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 46 |
| Conread position: | 18-201 |
| Cow position: | chr2:17114791-17114975 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 54, 45 |
| Conread position: | 18-229 |
| Cow position: | chr2:77378187-77377969 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 54, 45 |
| Conread position: | 18-314 |
| Cow position: | chr2:42599873-42599573 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 37 |
| Conread position: | 18-334 |
| Cow position: | chr2:42255377-42255064 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 45 |
| Conread position: | 18-348 |
| Cow position: | chr2:47361577-47361906 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 45 |
| Conread position: | 18-351 |
| Cow position: | chr2:29269000-29268676 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 43 |
| Conread position: | 18-373 |
| Cow position: | chr2:69747678-69748032 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 44 |
| Conread position: | 18-386 |
| Cow position: | chr2:988635-988267 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 45 |
| Conread position: | 18-386 |
| Cow position: | chr2:14884225-14883859 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 60 |
| Conread position: | 18-386 |
| Cow position: | chr2:18997666-18997309 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 45 |
| Conread position: | 18-386 |
| Cow position: | chr2:45623958-45623596 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 94 |
| Conread position: | 18-386 |
| Cow position: | chr2:51824865-51824516 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 60 |
| Conread position: | 18-399 |
| Cow position: | chr2:16514726-16514352 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 91 |
| Conread position: | 18-399 |
| Cow position: | chr2:39941431-39941059 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 33 |
| Conread position: | 25-220 |
| Cow position: | chr2:46994821-46995010 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 44, 38 |
| Conread position: | 25-228 |
| Cow position: | chr2:39068240-39068043 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 47, 38 |
| Conread position: | 25-354 |
| Cow position: | chr2:86307953-86308278 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 41, 53 |
| Conread position: | 25-390 |
| Cow position: | chr2:26438791-26439153 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 198, 132 |
| Conread position: | 25-390 |
| Cow position: | chr2:70704189-70703833 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 37 |
Show alignments to all cow chromosomes.