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Cow genome map

           
Conread name:
           
mE3-MI-P-E3-acw-d-07-1-UM.s1
        

               
Conread position:
               
1-133
               

               
Cow position:
               
chr10:734733-734603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
1-133
               

               
Cow position:
               
chr10:41916927-41916797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
1-157
               

               
Cow position:
               
chr10:42459588-42459429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
1-176
               

               
Cow position:
               
chr10:52152272-52152445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
114, 9
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr10:20811924-20812106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
72, 8
               

               
Conread position:
               
1-186
               

               
Cow position:
               
chr10:51779280-51779105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr10:65803337-65803156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
83, 9
               

               
Conread position:
               
1-193
               

               
Cow position:
               
chr10:8923684-8923878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
1-194
               

               
Cow position:
               
chr10:24971850-24971672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr10:20446849-20447036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr10:48377896-48377697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
85, 9
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr10:27362243-27362441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
182, 9
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr10:29211707-29211913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr10:69657171-69657375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
10, 56
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr10:34175247-34175018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
70, 13
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr10:14976043-14975812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
195, 9
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr10:60936702-60936923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
72, 9
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr10:11059950-11060184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
202, 9
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr10:20735457-20735687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
111, 9
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr10:64878246-64878004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
126, 17
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr10:9445264-9445031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr10:22786649-22786886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
196, 9
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr10:51313739-51313992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
53, 9
               

               
Conread position:
               
1-245
               

               
Cow position:
               
chr10:8170007-8170242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
82, 9
               

               
Conread position:
               
1-245
               

               
Cow position:
               
chr10:17982932-17983176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
110, 9
               

               
Conread position:
               
1-245
               

               
Cow position:
               
chr10:20517012-20517264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
70, 8
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr10:37528856-37528606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
74, 9
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr10:24548007-24548262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
195, 9
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr10:52029371-52029629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
60, 9
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr10:60032827-60032566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
70, 8
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr10:61839349-61839600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
186, 9
               

               
Conread position:
               
1-259
               

               
Cow position:
               
chr10:28933491-28933738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
1-260
               

               
Cow position:
               
chr10:6516437-6516174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
69, 9
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr10:41941831-41941566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
70, 8
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr10:20398948-20399212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
120, 9
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr10:6012285-6012020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
72, 9
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr10:66127606-66127875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
67, 141
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr10:6235674-6235420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr10:48259482-48259226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
115, 8
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr10:64876266-64876538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
55, 9
               

               
Conread position:
               
1-272
               

               
Cow position:
               
chr10:35975309-35975571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
72, 16
               

               
Conread position:
               
1-281
               

               
Cow position:
               
chr10:21037055-21037331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
63, 9
               

               
Conread position:
               
1-281
               

               
Cow position:
               
chr10:44854839-44855098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
67, 9
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr10:5502773-5503044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr10:35857305-35857031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
37, 9
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr10:25257336-25257621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
68, 9
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr10:36489768-36490051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
117, 9
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr10:49568954-49569228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
111, 8
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr10:13368100-13368386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
111, 9
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr10:1488598-1488866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr10:11212861-11213146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr10:16740308-16740031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
115, 9
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr10:29069905-29070191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
27, 13
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr10:29188612-29188321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
116, 17
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr10:34607307-34607596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr10:40106865-40107136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
204, 9
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr10:41397229-41397506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
122, 16
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr10:44817532-44817808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
111, 9
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr10:52569344-52569626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
191, 9
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr10:54730760-54731053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
68, 9
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr10:56835028-56835324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr10:61510941-61511215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
133, 9
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr10:318945-318669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
62, 9
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr10:54469634-54469356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
203, 9
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr10:2449102-2449389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
117, 13
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr10:43288120-43287834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
111, 9
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr10:2462729-2462449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
197, 9
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr10:10985746-10985463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
83, 9
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr10:17073604-17073324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
195, 16
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr10:25935993-25936272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
121, 9
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr10:29360657-29360959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
123, 8
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr10:33891338-33891043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
111, 9
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr10:77139-77415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr10:46468943-46468654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
55, 9
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr10:54504351-54504647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
68, 9
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr10:58259766-58259482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
254, 9
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr10:24561238-24560944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 9
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr10:29816338-29816647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr10:15115364-15115661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr10:35767329-35767043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
109, 9
               

               
Conread position:
               
1-303
               

               
Cow position:
               
chr10:15294113-15294414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
55, 9
               

               
Conread position:
               
1-303
               

               
Cow position:
               
chr10:59675857-59675554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
208, 8
               

               
Conread position:
               
1-304
               

               
Cow position:
               
chr10:30523308-30523011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
124, 9
               

               
Conread position:
               
1-311
               

               
Cow position:
               
chr10:38725409-38725714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
110, 9
               

               
Conread position:
               
1-313
               

               
Cow position:
               
chr10:38015641-38015933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
68, 9
               

               
Conread position:
               
1-313
               

               
Cow position:
               
chr10:59588418-59588119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
90, 9
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr10:29589092-29588775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
144, 122
               

               
Conread position:
               
1-331
               

               
Cow position:
               
chr10:23936232-23936551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
1-331
               

               
Cow position:
               
chr10:56828572-56828243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
68, 9
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr10:25293541-25293867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
40, 9
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr10:39875396-39875072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
1-339
               

               
Cow position:
               
chr10:13586463-13586786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
1-340
               

               
Cow position:
               
chr10:16599283-16598933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
68, 9
               

               
Conread position:
               
1-340
               

               
Cow position:
               
chr10:25699412-25699733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 9
               

               
Conread position:
               
1-340
               

               
Cow position:
               
chr10:49169308-49168951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
68, 9
               

               
Conread position:
               
1-341
               

               
Cow position:
               
chr10:49038310-49038669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
27, 9
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr10:5543500-5543162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
84, 9
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr10:30360279-30360607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
220, 9
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr10:49846525-49846863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
149, 9
               

               
Conread position:
               
1-346
               

               
Cow position:
               
chr10:1978914-1978582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
69, 9
               

               
Conread position:
               
1-346
               

               
Cow position:
               
chr10:23506736-23506402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
85, 13
               

               
Conread position:
               
1-346
               

               
Cow position:
               
chr10:26209512-26209158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
1-346
               

               
Cow position:
               
chr10:27828088-27828411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
209, 9
               

               
Conread position:
               
1-346
               

               
Cow position:
               
chr10:29251911-29252253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
1-346
               

               
Cow position:
               
chr10:31791510-31791170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
1-346
               

               
Cow position:
               
chr10:42312657-42312993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
117, 9
               

               
Conread position:
               
1-346
               

               
Cow position:
               
chr10:44783090-44783436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
81, 9
               

               
Conread position:
               
1-346
               

               
Cow position:
               
chr10:50332338-50332682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
124, 9
               

               
Conread position:
               
1-346
               

               
Cow position:
               
chr10:53248258-53247915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
85, 9
               

               
Conread position:
               
1-347
               

               
Cow position:
               
chr10:15462248-15462591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
197, 9
               

               
Conread position:
               
1-347
               

               
Cow position:
               
chr10:20132778-20132439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
111, 9
               

               
Conread position:
               
1-347
               

               
Cow position:
               
chr10:39314458-39314789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
68, 9
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr10:46491282-46490971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr10:57458468-57458801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr10:10043345-10043015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
78, 126
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr10:34430466-34430133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
123, 9
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr10:48257530-48257185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
60, 8
               

               
Conread position:
               
1-350
               

               
Cow position:
               
chr10:10720927-10720579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
68, 13
               

               
Conread position:
               
1-350
               

               
Cow position:
               
chr10:18041934-18042275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 9
               

               
Conread position:
               
1-350
               

               
Cow position:
               
chr10:35791682-35792019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
1-351
               

               
Cow position:
               
chr10:29279192-29279540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 9
               

               
Conread position:
               
1-351
               

               
Cow position:
               
chr10:39110245-39109921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
341, 9
               

               
Conread position:
               
1-354
               

               
Cow position:
               
chr10:28105323-28104981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
193, 9
               

               
Conread position:
               
1-354
               

               
Cow position:
               
chr10:52046612-52046969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
1-355
               

               
Cow position:
               
chr10:48462589-48462246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
117, 9
               

               
Conread position:
               
1-355
               

               
Cow position:
               
chr10:55122539-55122904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
1-357
               

               
Cow position:
               
chr10:21424935-21424579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 9
               

               
Conread position:
               
1-358
               

               
Cow position:
               
chr10:8077402-8077060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 9
               

               
Conread position:
               
1-358
               

               
Cow position:
               
chr10:32774865-32775215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
286, 9
               

               
Conread position:
               
1-360
               

               
Cow position:
               
chr10:31855078-31855438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 8
               

               
Conread position:
               
1-362
               

               
Cow position:
               
chr10:14787787-14787452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
189, 9
               

               
Conread position:
               
1-368
               

               
Cow position:
               
chr10:2407360-2407019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
204, 9
               

               
Conread position:
               
1-370
               

               
Cow position:
               
chr10:53674572-53674946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 9
               

               
Conread position:
               
1-376
               

               
Cow position:
               
chr10:65132708-65133058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
135, 9
               

               
Conread position:
               
1-378
               

               
Cow position:
               
chr10:59664214-59663851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
120, 9
               

               
Conread position:
               
1-380
               

               
Cow position:
               
chr10:37668411-37668038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr10:21461990-21462371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
117, 9
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr10:66752968-66753373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 249
               

               
Conread position:
               
1-393
               

               
Cow position:
               
chr10:6491024-6490627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 8
               

               
Conread position:
               
1-393
               

               
Cow position:
               
chr10:11032748-11032365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 9
               

               
Conread position:
               
1-397
               

               
Cow position:
               
chr10:26620802-26620420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
1-404
               

               
Cow position:
               
chr10:56705835-56705437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 8
               

               
Conread position:
               
1-404
               

               
Cow position:
               
chr10:60389010-60388614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 8
               

               
Conread position:
               
1-405
               

               
Cow position:
               
chr10:28039183-28038788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 8
               

               
Conread position:
               
1-406
               

               
Cow position:
               
chr10:16650170-16649783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 9
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr10:17584280-17583883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
187, 9
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chr10:49045593-49045992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
111, 9
               

               
Conread position:
               
1-412
               

               
Cow position:
               
chr10:9287816-9288203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
214, 9
               

               
Conread position:
               
1-413
               

               
Cow position:
               
chr10:28176644-28176226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
1-413
               

               
Cow position:
               
chr10:41985138-41984729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 9
               

               
Conread position:
               
1-413
               

               
Cow position:
               
chr10:49146282-49146683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
294, 9
               

               
Conread position:
               
1-413
               

               
Cow position:
               
chr10:64286047-64285623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 13
               

               
Conread position:
               
1-415
               

               
Cow position:
               
chr10:37529520-37529096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
1-415
               

               
Cow position:
               
chr10:37709289-37708848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
70, 119
               

               
Conread position:
               
1-415
               

               
Cow position:
               
chr10:45729173-45728782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
336, 9
               

               
Conread position:
               
1-415
               

               
Cow position:
               
chr10:57461114-57461531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 9
               

               
Conread position:
               
1-416
               

               
Cow position:
               
chr10:3998654-3999069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 9
               

               
Conread position:
               
1-416
               

               
Cow position:
               
chr10:59152114-59151701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 9
               

               
Conread position:
               
1-417
               

               
Cow position:
               
chr10:21082144-21082550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
341, 8
               

               
Conread position:
               
1-417
               

               
Cow position:
               
chr10:33002489-33002101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
1-417
               

               
Cow position:
               
chr10:67020376-67020777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
384, 8
               

               
Conread position:
               
1-418
               

               
Cow position:
               
chr10:8413301-8412891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 9
               

               
Conread position:
               
1-418
               

               
Cow position:
               
chr10:23576292-23576721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 8
               

               
Conread position:
               
1-418
               

               
Cow position:
               
chr10:41408036-41408447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
176, 9
               

               
Conread position:
               
1-418
               

               
Cow position:
               
chr10:42453885-42454282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 8
               

               
Conread position:
               
1-418
               

               
Cow position:
               
chr10:54476861-54477258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
81, 9
               

               
Conread position:
               
1-418
               

               
Cow position:
               
chr10:57786086-57786517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
50, 9
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr10:8760375-8760001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr10:10124094-10124508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 9
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chr10:8093566-8093139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chr10:23949170-23948752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 9
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chr10:24785854-24786274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chr10:69544582-69544177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
305, 9
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr10:19704753-19704345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 9
               

               
Conread position:
               
1-423
               

               
Cow position:
               
chr10:23056333-23055907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 9
               

               
Conread position:
               
1-423
               

               
Cow position:
               
chr10:27576226-27576623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
389, 9
               

               
Conread position:
               
1-423
               

               
Cow position:
               
chr10:30352593-30353036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
70, 13
               

               
Conread position:
               
1-423
               

               
Cow position:
               
chr10:62516625-62517050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 9
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr10:9341988-9341567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 9
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr10:22479978-22479558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 9
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr10:24744877-24745286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
76, 9
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr10:39081143-39081562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr10:39387208-39387635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 135
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr10:50183298-50182868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
202, 9
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr10:67144343-67144764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
116, 9
               

               
Conread position:
               
1-425
               

               
Cow position:
               
chr10:2849103-2849517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
111, 140
               

               
Conread position:
               
1-425
               

               
Cow position:
               
chr10:43438619-43439042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 9
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr10:19591017-19590593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 122
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr10:21448144-21447744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
241, 9
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr10:48255474-48255054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 16
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr10:56475218-56475643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 9
               

               
Conread position:
               
2-191
               

               
Cow position:
               
chr10:16432557-16432364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
69, 8
               

               
Conread position:
               
2-243
               

               
Cow position:
               
chr10:24755675-24755435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
197, 8
               

               
Conread position:
               
2-253
               

               
Cow position:
               
chr10:22652446-22652701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
44, 12
               

               
Conread position:
               
2-346
               

               
Cow position:
               
chr10:19372578-19372247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
186, 8
               

               
Conread position:
               
2-363
               

               
Cow position:
               
chr10:40645685-40646037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
317, 8
               

               
Conread position:
               
2-418
               

               
Cow position:
               
chr10:48741408-48741001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 59
               

               
Conread position:
               
3-175
               

               
Cow position:
               
chr10:39646354-39646181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
97, 140
               

               
Conread position:
               
3-195
               

               
Cow position:
               
chr10:4994807-4994623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
3-196
               

               
Cow position:
               
chr10:1056160-1055968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
61, 7
               

               
Conread position:
               
3-204
               

               
Cow position:
               
chr10:2394712-2394516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
3-238
               

               
Cow position:
               
chr10:37822977-37822744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
70, 140
               

               
Conread position:
               
3-243
               

               
Cow position:
               
chr10:19678618-19678864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
64, 139
               

               
Conread position:
               
3-253
               

               
Cow position:
               
chr10:22049003-22049261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
66, 149
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr10:60358484-60358728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
68, 7
               

               
Conread position:
               
3-255
               

               
Cow position:
               
chr10:47493453-47493207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
66, 7
               

               
Conread position:
               
3-262
               

               
Cow position:
               
chr10:50534122-50533855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
119, 7
               

               
Conread position:
               
3-272
               

               
Cow position:
               
chr10:1087769-1088049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
70, 117
               

               
Conread position:
               
3-286
               

               
Cow position:
               
chr10:51925171-51925441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
188, 0
               

               
Conread position:
               
3-294
               

               
Cow position:
               
chr10:804945-805231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
68, 100
               

               
Conread position:
               
3-294
               

               
Cow position:
               
chr10:56080424-56080131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
67, 143
               

               
Conread position:
               
3-296
               

               
Cow position:
               
chr10:7328481-7328753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
25, 7
               

               
Conread position:
               
3-313
               

               
Cow position:
               
chr10:38155209-38155511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
68, 127
               

               
Conread position:
               
3-331
               

               
Cow position:
               
chr10:37818810-37818482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
61, 142
               

               
Conread position:
               
3-338
               

               
Cow position:
               
chr10:39227907-39228229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
186, 41
               

               
Conread position:
               
3-346
               

               
Cow position:
               
chr10:5890020-5889673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
81, 142
               

               
Conread position:
               
3-347
               

               
Cow position:
               
chr10:20568885-20569212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
51, 7
               

               
Conread position:
               
3-347
               

               
Cow position:
               
chr10:29166028-29166363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
70, 159
               

               
Conread position:
               
3-350
               

               
Cow position:
               
chr10:31910690-31911014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
5, 34
               

               
Conread position:
               
3-351
               

               
Cow position:
               
chr10:31779518-31779174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
109, 61
               

               
Conread position:
               
3-355
               

               
Cow position:
               
chr10:21422402-21422064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
70, 117
               

               
Conread position:
               
3-362
               

               
Cow position:
               
chr10:30450308-30449958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 34
               

               
Conread position:
               
3-376
               

               
Cow position:
               
chr10:22528151-22527783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
200, 68
               

               
Conread position:
               
3-382
               

               
Cow position:
               
chr10:10134728-10135111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
68, 139
               

               
Conread position:
               
3-405
               

               
Cow position:
               
chr10:32417115-32417511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
206, 7
               

               
Conread position:
               
3-406
               

               
Cow position:
               
chr10:58607857-58608253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 7
               

               
Conread position:
               
3-412
               

               
Cow position:
               
chr10:47773484-47773895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
196, 53
               

               
Conread position:
               
3-417
               

               
Cow position:
               
chr10:38518881-38518475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 155
               

               
Conread position:
               
3-417
               

               
Cow position:
               
chr10:63276141-63276569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
115, 61
               

               
Conread position:
               
3-421
               

               
Cow position:
               
chr10:16598439-16598875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
190, 85
               

               
Conread position:
               
3-422
               

               
Cow position:
               
chr10:34655361-34654926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
68, 54
               

               
Conread position:
               
3-426
               

               
Cow position:
               
chr10:3115239-3115653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 74
               

               
Conread position:
               
3-426
               

               
Cow position:
               
chr10:6038584-6038173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 8
               

               
Conread position:
               
3-426
               

               
Cow position:
               
chr10:55011892-55012305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
105, 7
               

               
Conread position:
               
4-174
               

               
Cow position:
               
chr10:11609358-11609530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
36, 137
               

               
Conread position:
               
4-249
               

               
Cow position:
               
chr10:25865890-25866143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
67, 127
               

               
Conread position:
               
4-256
               

               
Cow position:
               
chr10:40646289-40646541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
152, 21
               

               
Conread position:
               
4-397
               

               
Cow position:
               
chr10:58746476-58746109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
265, 75
               

               
Conread position:
               
4-400
               

               
Cow position:
               
chr10:32583667-32584057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 60
               

               
Conread position:
               
4-412
               

               
Cow position:
               
chr10:42755085-42755470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
62, 86
               

               
Conread position:
               
4-417
               

               
Cow position:
               
chr10:668633-669063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
118, 138
               

               
Conread position:
               
5-416
               

               
Cow position:
               
chr10:8648766-8649162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
63, 115
               

               
Conread position:
               
6-202
               

               
Cow position:
               
chr10:3180865-3180674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
168, 120
               

               
Conread position:
               
7-191
               

               
Cow position:
               
chr10:65130908-65130724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
7-256
               

               
Cow position:
               
chr10:64596183-64596433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
64, 123
               

               
Conread position:
               
7-423
               

               
Cow position:
               
chr10:17863338-17863749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 119
               

               
Conread position:
               
8-294
               

               
Cow position:
               
chr10:1427795-1428080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
63, 132
               

               
Conread position:
               
8-382
               

               
Cow position:
               
chr10:38449544-38449188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 131
               

               
Conread position:
               
9-169
               

               
Cow position:
               
chr10:28835986-28836139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
147, 7
               

               
Conread position:
               
9-207
               

               
Cow position:
               
chr10:40543265-40543062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
56, 62
               

               
Conread position:
               
9-245
               

               
Cow position:
               
chr10:48388511-48388278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
190, 107
               

               
Conread position:
               
9-294
               

               
Cow position:
               
chr10:8934243-8934513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
106, 79
               

               
Conread position:
               
9-317
               

               
Cow position:
               
chr10:20478643-20478959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
62, 151
               

               
Conread position:
               
9-346
               

               
Cow position:
               
chr10:60960696-60961024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
108, 133
               

               
Conread position:
               
9-361
               

               
Cow position:
               
chr10:13311488-13311836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 116
               

               
Conread position:
               
9-380
               

               
Cow position:
               
chr10:721055-721431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
62, 133
               

               
Conread position:
               
10-216
               

               
Cow position:
               
chr10:20505296-20505499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
102, 127
               

               
Conread position:
               
10-421
               

               
Cow position:
               
chr10:35905073-35904660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
17, 132
               

               
Conread position:
               
12-187
               

               
Cow position:
               
chr10:32503209-32503382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
99, 59
               

               
Conread position:
               
12-195
               

               
Cow position:
               
chr10:57736405-57736220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
61, 82
               

               
Conread position:
               
12-198
               

               
Cow position:
               
chr10:54936353-54936165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
100, 126
               

               
Conread position:
               
12-202
               

               
Cow position:
               
chr10:35026239-35026427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
45, 63
               

               
Conread position:
               
12-237
               

               
Cow position:
               
chr10:6986208-6986432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
181, 72
               

               
Conread position:
               
12-238
               

               
Cow position:
               
chr10:19104417-19104186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
59, 136
               

               
Conread position:
               
12-242
               

               
Cow position:
               
chr10:21657179-21657416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
57, 133
               

               
Conread position:
               
12-253
               

               
Cow position:
               
chr10:57457091-57457336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
59, 128
               

               
Conread position:
               
12-256
               

               
Cow position:
               
chr10:5607403-5607648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
100, 76
               

               
Conread position:
               
12-256
               

               
Cow position:
               
chr10:47165636-47165873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
178, 19
               

               
Conread position:
               
12-258
               

               
Cow position:
               
chr10:34554329-34554087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
106, 118
               

               
Conread position:
               
12-268
               

               
Cow position:
               
chr10:69567613-69567864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
79, 115
               

               
Conread position:
               
12-269
               

               
Cow position:
               
chr10:20095513-20095777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
59, 133
               

               
Conread position:
               
12-271
               

               
Cow position:
               
chr10:6173119-6173376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
176, 85
               

               
Conread position:
               
12-271
               

               
Cow position:
               
chr10:57059522-57059263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
57, 15
               

               
Conread position:
               
12-271
               

               
Cow position:
               
chr10:64182209-64182466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
59, 67
               

               
Conread position:
               
12-284
               

               
Cow position:
               
chr10:52113906-52113637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
186, 49
               

               
Conread position:
               
12-287
               

               
Cow position:
               
chr10:8923033-8923314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
59, 131
               

               
Conread position:
               
12-287
               

               
Cow position:
               
chr10:24096620-24096338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
59, 108
               

               
Conread position:
               
12-287
               

               
Cow position:
               
chr10:29628191-29627932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
67, 106
               

               
Conread position:
               
12-287
               

               
Cow position:
               
chr10:38942185-38942466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
50, 137
               

               
Conread position:
               
12-287
               

               
Cow position:
               
chr10:44771415-44771684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
107, 135
               

               
Conread position:
               
12-287
               

               
Cow position:
               
chr10:53336644-53336370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
202, 59
               

               
Conread position:
               
12-291
               

               
Cow position:
               
chr10:13050534-13050250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
56, 129
               

               
Conread position:
               
12-291
               

               
Cow position:
               
chr10:17175793-17176070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
42, 59
               

               
Conread position:
               
12-293
               

               
Cow position:
               
chr10:30460404-30460694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
56, 150
               

               
Conread position:
               
12-294
               

               
Cow position:
               
chr10:9083058-9083342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
74, 59
               

               
Conread position:
               
12-294
               

               
Cow position:
               
chr10:10048441-10048712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
100, 76
               

               
Conread position:
               
12-294
               

               
Cow position:
               
chr10:22520407-22520120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
59, 76
               

               
Conread position:
               
12-294
               

               
Cow position:
               
chr10:27717082-27716800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
184, 214
               

               
Conread position:
               
12-294
               

               
Cow position:
               
chr10:46195551-46195823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
119, 39
               

               
Conread position:
               
12-294
               

               
Cow position:
               
chr10:62286310-62286597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
78, 126
               

               
Conread position:
               
12-295
               

               
Cow position:
               
chr10:22396014-22396294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
25, 51
               

               
Conread position:
               
12-295
               

               
Cow position:
               
chr10:36896164-36896447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
196, 76
               

               
Conread position:
               
12-295
               

               
Cow position:
               
chr10:43487470-43487754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
52, 77
               

               
Conread position:
               
12-295
               

               
Cow position:
               
chr10:57405176-57404892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
207, 126
               

               
Conread position:
               
12-299
               

               
Cow position:
               
chr10:11080717-11081010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
59, 130
               

               
Conread position:
               
12-331
               

               
Cow position:
               
chr10:53934980-53934678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
52, 15
               

               
Conread position:
               
12-332
               

               
Cow position:
               
chr10:6719661-6719974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
184, 87
               

               
Conread position:
               
12-338
               

               
Cow position:
               
chr10:24763238-24763564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
126, 71
               

               
Conread position:
               
12-345
               

               
Cow position:
               
chr10:13765405-13765075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
181, 126
               

               
Conread position:
               
12-345
               

               
Cow position:
               
chr10:22390348-22390685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
126, 221
               

               
Conread position:
               
12-345
               

               
Cow position:
               
chr10:43508754-43509088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
101, 36
               

               
Conread position:
               
12-346
               

               
Cow position:
               
chr10:11009183-11009499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
206, 31
               

               
Conread position:
               
12-346
               

               
Cow position:
               
chr10:11967086-11966759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
43, 130
               

               
Conread position:
               
12-350
               

               
Cow position:
               
chr10:24133061-24132728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
52, 32
               

               
Conread position:
               
12-350
               

               
Cow position:
               
chr10:28671063-28670723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
59, 74
               

               
Conread position:
               
12-350
               

               
Cow position:
               
chr10:31401139-31400804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
59, 132
               

               
Conread position:
               
12-350
               

               
Cow position:
               
chr10:54848538-54848873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
164, 5
               

               
Conread position:
               
12-352
               

               
Cow position:
               
chr10:45769799-45770139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
59, 129
               

               
Conread position:
               
12-353
               

               
Cow position:
               
chr10:25587-25921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
10, 79
               

               
Conread position:
               
12-355
               

               
Cow position:
               
chr10:23886690-23886363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
189, 85
               

               
Conread position:
               
12-355
               

               
Cow position:
               
chr10:35862471-35862131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
59, 135
               

               
Conread position:
               
12-355
               

               
Cow position:
               
chr10:42745672-42746012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
65, 90
               

               
Conread position:
               
12-355
               

               
Cow position:
               
chr10:45370814-45371155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
184, 126
               

               
Conread position:
               
12-362
               

               
Cow position:
               
chr10:9576280-9575944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
59, 80
               

               
Conread position:
               
12-374
               

               
Cow position:
               
chr10:33665599-33665956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
77, 59
               

               
Conread position:
               
12-382
               

               
Cow position:
               
chr10:13391294-13390923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
58, 130
               

               
Conread position:
               
12-392
               

               
Cow position:
               
chr10:32030065-32029699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
187, 49
               

               
Conread position:
               
12-415
               

               
Cow position:
               
chr10:54948371-54947966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
75, 31
               

               
Conread position:
               
12-417
               

               
Cow position:
               
chr10:40421086-40420675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
52, 137
               

               
Conread position:
               
12-418
               

               
Cow position:
               
chr10:24313130-24312711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
74, 133
               

               
Conread position:
               
12-420
               

               
Cow position:
               
chr10:19402694-19403096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
71, 79
               

               
Conread position:
               
12-420
               

               
Cow position:
               
chr10:67627228-67626820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
168, 49
               

               
Conread position:
               
12-424
               

               
Cow position:
               
chr10:8403968-8404393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
61, 133
               

               
Conread position:
               
12-424
               

               
Cow position:
               
chr10:12314927-12315312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
180, 30
               

               
Conread position:
               
12-424
               

               
Cow position:
               
chr10:31362451-31362032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
59, 28
               

               
Conread position:
               
12-424
               

               
Cow position:
               
chr10:51944121-51944545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
169, 75
               

               
Conread position:
               
12-424
               

               
Cow position:
               
chr10:63940534-63940958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
74, 59
               

               
Conread position:
               
12-425
               

               
Cow position:
               
chr10:20372372-20371944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
51, 135
               

               
Conread position:
               
12-426
               

               
Cow position:
               
chr10:16645435-16644998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
56, 135
               

               
Conread position:
               
12-426
               

               
Cow position:
               
chr10:34661558-34661143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
59, 127
               

               
Conread position:
               
12-426
               

               
Cow position:
               
chr10:53973603-53974007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
65, 130
               

               
Conread position:
               
12-426
               

               
Cow position:
               
chr10:62353225-62353646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
58, 39
               

               
Conread position:
               
12-426
               

               
Cow position:
               
chr10:65072351-65071947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 94
               

               
Conread position:
               
13-245
               

               
Cow position:
               
chr10:31266568-31266340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
100, 81
               

               
Conread position:
               
13-250
               

               
Cow position:
               
chr10:35802609-35802374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
15, 126
               

               
Conread position:
               
13-256
               

               
Cow position:
               
chr10:41255748-41255988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
190, 48
               

               
Conread position:
               
13-285
               

               
Cow position:
               
chr10:2304617-2304349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
75, 7
               

               
Conread position:
               
13-287
               

               
Cow position:
               
chr10:7367029-7366749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
54, 129
               

               
Conread position:
               
13-287
               

               
Cow position:
               
chr10:37287417-37287141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
58, 107
               

               
Conread position:
               
13-293
               

               
Cow position:
               
chr10:50110144-50109863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
100, 61
               

               
Conread position:
               
13-294
               

               
Cow position:
               
chr10:65071071-65071352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
100, 128
               

               
Conread position:
               
13-295
               

               
Cow position:
               
chr10:31027884-31027600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
183, 54
               

               
Conread position:
               
13-295
               

               
Cow position:
               
chr10:53083925-53084211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
51, 135
               

               
Conread position:
               
13-341
               

               
Cow position:
               
chr10:15318648-15318970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
186, 56
               

               
Conread position:
               
13-345
               

               
Cow position:
               
chr10:35731766-35731439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
58, 127
               

               
Conread position:
               
13-346
               

               
Cow position:
               
chr10:61588501-61588171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
99, 61
               

               
Conread position:
               
13-347
               

               
Cow position:
               
chr10:24870925-24871255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 129
               

               
Conread position:
               
13-348
               

               
Cow position:
               
chr10:35753200-35752871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
58, 127
               

               
Conread position:
               
13-350
               

               
Cow position:
               
chr10:41803136-41802799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
68, 122
               

               
Conread position:
               
13-353
               

               
Cow position:
               
chr10:19895159-19895489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
143, 102
               

               
Conread position:
               
13-355
               

               
Cow position:
               
chr10:22616883-22616543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
50, 134
               

               
Conread position:
               
13-356
               

               
Cow position:
               
chr10:42636984-42637331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
109, 56
               

               
Conread position:
               
13-375
               

               
Cow position:
               
chr10:15867995-15868370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
66, 234
               

               
Conread position:
               
13-382
               

               
Cow position:
               
chr10:20110178-20109825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 150
               

               
Conread position:
               
13-414
               

               
Cow position:
               
chr10:45606667-45606275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 31
               

               
Conread position:
               
13-416
               

               
Cow position:
               
chr10:22321279-22321676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
33, 56
               

               
Conread position:
               
13-418
               

               
Cow position:
               
chr10:15872103-15871710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
163, 48
               

               
Conread position:
               
13-421
               

               
Cow position:
               
chr10:28152623-28152212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
58, 132
               

               
Conread position:
               
13-421
               

               
Cow position:
               
chr10:35911985-35911597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
368, 74
               

               
Conread position:
               
13-424
               

               
Cow position:
               
chr10:52296257-52296683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
58, 129
               

               
Conread position:
               
13-424
               

               
Cow position:
               
chr10:64041842-64042271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
60, 89
               

               
Conread position:
               
13-425
               

               
Cow position:
               
chr10:10468738-10469151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
58, 38
               

               
Conread position:
               
13-426
               

               
Cow position:
               
chr10:37235793-37235360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
71, 132
               

               
Conread position:
               
13-426
               

               
Cow position:
               
chr10:56732806-56733217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
186, 56
               

               
Conread position:
               
14-252
               

               
Cow position:
               
chr10:9798432-9798194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
184, 47
               

               
Conread position:
               
14-254
               

               
Cow position:
               
chr10:6529960-6530196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
40, 60
               

               
Conread position:
               
14-281
               

               
Cow position:
               
chr10:61305042-61305292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
104, 125
               

               
Conread position:
               
14-294
               

               
Cow position:
               
chr10:15293033-15293306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
59, 14
               

               
Conread position:
               
14-331
               

               
Cow position:
               
chr10:38014134-38014440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
174, 47
               

               
Conread position:
               
14-346
               

               
Cow position:
               
chr10:37415546-37415879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
57, 98
               

               
Conread position:
               
14-347
               

               
Cow position:
               
chr10:20897064-20897378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
54, 94
               

               
Conread position:
               
14-350
               

               
Cow position:
               
chr10:50559166-50558831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
86, 126
               

               
Conread position:
               
14-355
               

               
Cow position:
               
chr10:6489627-6489970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
57, 128
               

               
Conread position:
               
14-381
               

               
Cow position:
               
chr10:66875072-66874697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
120, 102
               

               
Conread position:
               
14-421
               

               
Cow position:
               
chr10:20552942-20553363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 78
               

               
Conread position:
               
14-423
               

               
Cow position:
               
chr10:60722383-60721967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
283, 47
               

               
Conread position:
               
14-425
               

               
Cow position:
               
chr10:24752917-24753324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
307, 74
               

               
Conread position:
               
15-294
               

               
Cow position:
               
chr10:51696515-51696781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
174, 39
               

               
Conread position:
               
17-284
               

               
Cow position:
               
chr10:1976556-1976281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
126, 218
               

               
Conread position:
               
17-287
               

               
Cow position:
               
chr10:31466508-31466781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
52, 104
               

               
Conread position:
               
17-290
               

               
Cow position:
               
chr10:25882190-25882449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
183, 74
               

               
Conread position:
               
17-294
               

               
Cow position:
               
chr10:24308138-24307883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
261, 34
               

               
Conread position:
               
17-294
               

               
Cow position:
               
chr10:36001967-36002238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
192, 44
               

               
Conread position:
               
17-294
               

               
Cow position:
               
chr10:62219588-62219874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
95, 127
               

               
Conread position:
               
17-362
               

               
Cow position:
               
chr10:40164165-40163829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
168, 32
               

               
Conread position:
               
17-425
               

               
Cow position:
               
chr10:59010377-59009951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
40, 129
               

               
Conread position:
               
17-426
               

               
Cow position:
               
chr10:15818032-15817609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
54, 126
               

               
Conread position:
               
19-214
               

               
Cow position:
               
chr10:24871651-24871848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
52, 126
               

               
Conread position:
               
19-254
               

               
Cow position:
               
chr10:32093569-32093807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
93, 118
               

               
Conread position:
               
19-256
               

               
Cow position:
               
chr10:37444450-37444214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
95, 64
               

               
Conread position:
               
19-294
               

               
Cow position:
               
chr10:45379242-45378964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
52, 127
               

               
Conread position:
               
19-355
               

               
Cow position:
               
chr10:52278493-52278822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
52, 123
               

               
Conread position:
               
19-375
               

               
Cow position:
               
chr10:48317190-48316829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
169, 97
               

               
Conread position:
               
20-262
               

               
Cow position:
               
chr10:38512941-38513192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
53, 122
               

               
Conread position:
               
21-291
               

               
Cow position:
               
chr10:24744316-24744584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
167, 117
               

               
Conread position:
               
21-294
               

               
Cow position:
               
chr10:17844526-17844807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
11, 129
               

               
Conread position:
               
21-415
               

               
Cow position:
               
chr10:6435827-6436235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
96, 121
               

               
Conread position:
               
23-286
               

               
Cow position:
               
chr10:24022513-24022248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
78, 124
               

               
Conread position:
               
24-187
               

               
Cow position:
               
chr10:15874668-15874503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
47, 121
               

               
Conread position:
               
24-349
               

               
Cow position:
               
chr10:29920062-29919747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
70, 46
               

               
Conread position:
               
27-331
               

               
Cow position:
               
chr10:47412334-47412032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
43, 118
               

               
Conread position:
               
27-350
               

               
Cow position:
               
chr10:46493229-46492900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
90, 115
               

               
Conread position:
               
27-350
               

               
Cow position:
               
chr10:57142437-57142122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
161, 111
               

               
Conread position:
               
28-377
               

               
Cow position:
               
chr10:10148425-10148767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
43, 68
               

               
Conread position:
               
28-420
               

               
Cow position:
               
chr10:22341340-22341757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
40, 92
               

               
Conread position:
               
29-196
               

               
Cow position:
               
chr10:888702-888868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
85, 61
               

               
Conread position:
               
29-296
               

               
Cow position:
               
chr10:66194528-66194262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
83, 108
               

               
Conread position:
               
29-346
               

               
Cow position:
               
chr10:30787832-30787539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
88, 31
               

               
Conread position:
               
29-346
               

               
Cow position:
               
chr10:37014412-37014723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
88, 111
               

               
Conread position:
               
29-387
               

               
Cow position:
               
chr10:52589916-52589551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 203
               

               
Conread position:
               
29-404
               

               
Cow position:
               
chr10:59153868-59153514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
169, 58
               

               
Conread position:
               
29-415
               

               
Cow position:
               
chr10:33733093-33732724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
42, 114
               

               
Conread position:
               
29-426
               

               
Cow position:
               
chr10:41771389-41771004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
81, 139
               

               
Conread position:
               
30-287
               

               
Cow position:
               
chr10:7816885-7817142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
172, 108
               

               
Conread position:
               
30-416
               

               
Cow position:
               
chr10:25478876-25479252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 202
               

               
Conread position:
               
30-422
               

               
Cow position:
               
chr10:38429771-38429385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
40, 130
               

               
Conread position:
               
30-423
               

               
Cow position:
               
chr10:69766901-69766515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
335, 79
               

               
Conread position:
               
31-321
               

               
Cow position:
               
chr10:31374320-31374022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
50, 106
               

               
Conread position:
               
31-350
               

               
Cow position:
               
chr10:1996887-1996576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
40, 114
               

               
Conread position:
               
32-412
               

               
Cow position:
               
chr10:50776481-50776862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
32, 195
               

               
Conread position:
               
33-199
               

               
Cow position:
               
chr10:17927920-17928087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
13, 98
               

               
Conread position:
               
33-299
               

               
Cow position:
               
chr10:41254782-41254527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
92, 29
               

               
Conread position:
               
36-286
               

               
Cow position:
               
chr10:55929980-55930231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
76, 21
               

               
Conread position:
               
36-372
               

               
Cow position:
               
chr10:41794930-41794604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
33, 199
               

               
Conread position:
               
36-383
               

               
Cow position:
               
chr10:9568843-9568503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
22, 30
               

               
Conread position:
               
36-410
               

               
Cow position:
               
chr10:38739336-38739679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 99
               

               
Conread position:
               
38-301
               

               
Cow position:
               
chr10:59164311-59164056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
33, 105
               

               
Conread position:
               
40-426
               

               
Cow position:
               
chr10:7292009-7291626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
178, 156
               

               
Conread position:
               
43-247
               

               
Cow position:
               
chr10:3985224-3985423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
158, 28
               

               
Conread position:
               
44-328
               

               
Cow position:
               
chr10:8219073-8219356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
27, 95
               

               
Conread position:
               
44-406
               

               
Cow position:
               
chr10:29339597-29339247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 99
               

               
Conread position:
               
44-413
               

               
Cow position:
               
chr10:26145619-26145253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 25
               

               
Conread position:
               
45-294
               

               
Cow position:
               
chr10:13617848-13617613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
159, 36
               

               
Conread position:
               
45-302
               

               
Cow position:
               
chr10:58399489-58399232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
77, 50
               

               
Conread position:
               
47-340
               

               
Cow position:
               
chr10:65424107-65423821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
22, 47
               

               
Conread position:
               
47-426
               

               
Cow position:
               
chr10:29689528-29689162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 76
               

               
Conread position:
               
48-303
               

               
Cow position:
               
chr10:39304057-39303796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
23, 16
               

               
Conread position:
               
48-382
               

               
Cow position:
               
chr10:50044851-50044519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 24
               

               
Conread position:
               
55-256
               

               
Cow position:
               
chr10:36285303-36285507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
132, 9
               

               
Conread position:
               
55-414
               

               
Cow position:
               
chr10:12486069-12486422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
144, 28
               

               
Conread position:
               
56-409
               

               
Cow position:
               
chr10:50135003-50134647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
138, 79
               

               
Conread position:
               
57-294
               

               
Cow position:
               
chr10:58612813-58612594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
33, 26
               

               
Conread position:
               
57-333
               

               
Cow position:
               
chr10:23135133-23135387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
20, 71
               

               
Conread position:
               
57-346
               

               
Cow position:
               
chr10:4183996-4184285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
57, 85
               

               
Conread position:
               
58-277
               

               
Cow position:
               
chr10:1201740-1201960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
67, 58
               

               
Conread position:
               
58-286
               

               
Cow position:
               
chr10:22977862-22977644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
69, 41
               

               
Conread position:
               
58-350
               

               
Cow position:
               
chr10:47690200-47690481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
136, 7
               

               
Conread position:
               
58-423
               

               
Cow position:
               
chr10:32834623-32834997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
31, 171
               

               
Conread position:
               
59-350
               

               
Cow position:
               
chr10:28395495-28395208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
11, 82
               

               
Conread position:
               
62-349
               

               
Cow position:
               
chr10:52695919-52695635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
127, 76
               

               
Conread position:
               
65-330
               

               
Cow position:
               
chr10:1351752-1352005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
240, 52
               

               
Conread position:
               
65-380
               

               
Cow position:
               
chr10:55849169-55849466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
173, 73
               

               
Conread position:
               
66-245
               

               
Cow position:
               
chr10:50200524-50200704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
52, 77
               

               
Conread position:
               
66-262
               

               
Cow position:
               
chr10:51942604-51942805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
27, 71
               

               
Conread position:
               
66-283
               

               
Cow position:
               
chr10:17699202-17698993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
39, 102
               

               
Conread position:
               
66-286
               

               
Cow position:
               
chr10:747278-747503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
48, 69
               

               
Conread position:
               
66-286
               

               
Cow position:
               
chr10:45678830-45679051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
47, 78
               

               
Conread position:
               
66-294
               

               
Cow position:
               
chr10:48513270-48513041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
130, 73
               

               
Conread position:
               
66-296
               

               
Cow position:
               
chr10:35653477-35653713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
34, 27
               

               
Conread position:
               
66-304
               

               
Cow position:
               
chr10:35779088-35778849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
137, 73
               

               
Conread position:
               
66-346
               

               
Cow position:
               
chr10:10753245-10752978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
17, 127
               

               
Conread position:
               
66-346
               

               
Cow position:
               
chr10:24375366-24375633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
66-361
               

               
Cow position:
               
chr10:1070326-1070041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
133, 60
               

               
Conread position:
               
66-426
               

               
Cow position:
               
chr10:24276919-24276541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
91, 75
               

               
Conread position:
               
67-294
               

               
Cow position:
               
chr10:24781002-24781229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
122, 72
               

               
Conread position:
               
67-301
               

               
Cow position:
               
chr10:33215615-33215853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
120, 74
               

               
Conread position:
               
67-318
               

               
Cow position:
               
chr10:42893150-42892909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
125, 49
               

               
Conread position:
               
67-355
               

               
Cow position:
               
chr10:10120013-10120291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
67-414
               

               
Cow position:
               
chr10:34897804-34898133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
312, 70
               

               
Conread position:
               
68-346
               

               
Cow position:
               
chr10:2613182-2613457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
120, 71
               

               
Conread position:
               
68-347
               

               
Cow position:
               
chr10:68926971-68927239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
49, 20
               

               
Conread position:
               
68-355
               

               
Cow position:
               
chr10:24756232-24756509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
69-294
               

               
Cow position:
               
chr10:11463850-11463626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
43, 73
               

               
Conread position:
               
69-418
               

               
Cow position:
               
chr10:4109409-4109759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
49, 19
               

               
Conread position:
               
71-350
               

               
Cow position:
               
chr10:19549670-19549393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
54, 70
               

               
Conread position:
               
71-406
               

               
Cow position:
               
chr10:24422340-24422003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
116, 12
               

               
Conread position:
               
73-423
               

               
Cow position:
               
chr10:16683992-16683643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 17
               

               
Conread position:
               
74-414
               

               
Cow position:
               
chr10:51221246-51220918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
24, 155
               

               
Conread position:
               
74-416
               

               
Cow position:
               
chr10:11497069-11497382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
315, 29
               

               
Conread position:
               
76-345
               

               
Cow position:
               
chr10:37295839-37295584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
77-414
               

               
Cow position:
               
chr10:23096954-23096622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 39
               

               
Conread position:
               
79-271
               

               
Cow position:
               
chr10:35856523-35856338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
83-416
               

               
Cow position:
               
chr10:33240847-33240521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 58
               

               
Conread position:
               
85-284
               

               
Cow position:
               
chr10:9445007-9444801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
32, 24
               

               
Conread position:
               
90-290
               

               
Cow position:
               
chr10:47724785-47724984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
28, 55
               

               
Conread position:
               
90-294
               

               
Cow position:
               
chr10:41626427-41626635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
33, 144
               

               
Conread position:
               
90-340
               

               
Cow position:
               
chr10:46184587-46184823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
97, 26
               

               
Conread position:
               
90-346
               

               
Cow position:
               
chr10:65345631-65345384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
118, 33
               

               
Conread position:
               
90-350
               

               
Cow position:
               
chr10:4164105-4164363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
109, 55
               

               
Conread position:
               
90-412
               

               
Cow position:
               
chr10:19127071-19126759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
52, 171
               

               
Conread position:
               
90-420
               

               
Cow position:
               
chr10:2202287-2201952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
27, 52
               

               
Conread position:
               
90-420
               

               
Cow position:
               
chr10:38376814-38376492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
252, 49
               

               
Conread position:
               
92-245
               

               
Cow position:
               
chr10:48367200-48367049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
92-256
               

               
Cow position:
               
chr10:2537934-2538099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
30, 44
               

               
Conread position:
               
93-350
               

               
Cow position:
               
chr10:6543563-6543820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
105, 48
               

               
Conread position:
               
93-412
               

               
Cow position:
               
chr10:28776191-28776505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
125, 46
               

               
Conread position:
               
93-417
               

               
Cow position:
               
chr10:37884953-37884633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
226, 48
               

               
Conread position:
               
100-406
               

               
Cow position:
               
chr10:47788876-47789171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
293, 41
               

               
Conread position:
               
108-387
               

               
Cow position:
               
chr10:29328533-29328250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
31, 43
               

               
Conread position:
               
110-402
               

               
Cow position:
               
chr10:15874218-15873933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 29
               

               
Conread position:
               
112-349
               

               
Cow position:
               
chr10:6663886-6664125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
94, 29
               

               
Conread position:
               
118-426
               

               
Cow position:
               
chr10:45624284-45623987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
70, 23
               

               
Conread position:
               
119-410
               

               
Cow position:
               
chr10:7383745-7383444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
6, 21
               

               
Conread position:
               
119-417
               

               
Cow position:
               
chr10:62325480-62325772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
23, 7
               

               
Conread position:
               
123-350
               

               
Cow position:
               
chr10:8449369-8449598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
32, 16
               

               
Conread position:
               
123-364
               

               
Cow position:
               
chr10:64722133-64721899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
77, 18
               

               
Conread position:
               
123-392
               

               
Cow position:
               
chr10:60446603-60446863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
64, 16
               

               
Conread position:
               
130-420
               

               
Cow position:
               
chr10:15391366-15391655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
10, 34
               

               
Conread position:
               
133-413
               

               
Cow position:
               
chr10:48178233-48178515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
66, 99
               

               
Conread position:
               
135-416
               

               
Cow position:
               
chr10:31368850-31368574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
69, 19
               

               
Conread position:
               
136-382
               

               
Cow position:
               
chr10:10026240-10026478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
214, 25
               

               
Conread position:
               
140-346
               

               
Cow position:
               
chr10:52881733-52881530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
60, 87
               

               
Conread position:
               
141-287
               

               
Cow position:
               
chr10:67581170-67581319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
59, 26
               

               
Conread position:
               
141-400
               

               
Cow position:
               
chr10:12100661-12100398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
66, 91
               

               
Conread position:
               
141-420
               

               
Cow position:
               
chr10:19098725-19099012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
55, 91
               

               
Conread position:
               
141-420
               

               
Cow position:
               
chr10:23404088-23404363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
58, 81
               

               
Conread position:
               
141-421
               

               
Cow position:
               
chr10:58935281-58935008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
74, 126
               

               
Conread position:
               
141-425
               

               
Cow position:
               
chr10:28340754-28341021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
64, 31
               

               
Conread position:
               
141-426
               

               
Cow position:
               
chr10:30741266-30741545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 90
               

               
Conread position:
               
141-426
               

               
Cow position:
               
chr10:49624652-49624938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
65, 86
               

               
Conread position:
               
147-349
               

               
Cow position:
               
chr10:33084543-33084346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
45, 82
               

               
Conread position:
               
147-424
               

               
Cow position:
               
chr10:55396084-55395792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
55, 31
               

               
Conread position:
               
148-416
               

               
Cow position:
               
chr10:27538396-27538661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
59, 76
               

               
Conread position:
               
149-426
               

               
Cow position:
               
chr10:65558800-65558524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 83
               

               
Conread position:
               
150-406
               

               
Cow position:
               
chr10:22708101-22708349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
244, 49
               

               
Conread position:
               
154-358
               

               
Cow position:
               
chr10:17926178-17925972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
37, 77
               

               
Conread position:
               
154-416
               

               
Cow position:
               
chr10:9530085-9529835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
50, 80
               

               
Conread position:
               
155-425
               

               
Cow position:
               
chr10:69225826-69226098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
49, 65
               

               
Conread position:
               
157-420
               

               
Cow position:
               
chr10:62290726-62290459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
42, 70
               

               
Conread position:
               
158-383
               

               
Cow position:
               
chr10:68857759-68857535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
46, 74
               

               
Conread position:
               
159-414
               

               
Cow position:
               
chr10:4828117-4827864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
47, 75
               

               
Conread position:
               
160-415
               

               
Cow position:
               
chr10:53364932-53365194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
44, 19
               

               
Conread position:
               
161-336
               

               
Cow position:
               
chr10:29359859-29360014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
163-360
               

               
Cow position:
               
chr10:49472609-49472411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
27, 71
               

               
Conread position:
               
163-422
               

               
Cow position:
               
chr10:11316867-11317119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
31, 18
               

               
Conread position:
               
169-425
               

               
Cow position:
               
chr10:11404221-11403970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
35, 53
               

               
Conread position:
               
172-418
               

               
Cow position:
               
chr10:37707005-37707251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
32, 7
               

               
Conread position:
               
176-378
               

               
Cow position:
               
chr10:36498135-36498331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
27, 52
               

               
Conread position:
               
185-414
               

               
Cow position:
               
chr10:9794724-9794506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
192-392
               

               
Cow position:
               
chr10:31250790-31250601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
187, 22
               

               
Conread position:
               
196-376
               

               
Cow position:
               
chr10:53762169-53762002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
198-425
               

               
Cow position:
               
chr10:68251764-68251981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
191, 31
               

               
Conread position:
               
201-374
               

               
Cow position:
               
chr10:1478482-1478315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
63, 19
               

               
Conread position:
               
201-425
               

               
Cow position:
               
chr10:52244697-52244477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
192, 28
               

               
Conread position:
               
202-389
               

               
Cow position:
               
chr10:8330567-8330750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
6, 28
               

               
Conread position:
               
206-387
               

               
Cow position:
               
chr10:28492513-28492337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
208-405
               

               
Cow position:
               
chr10:40917135-40917319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
181, 21
               

               
Conread position:
               
214-416
               

               
Cow position:
               
chr10:1108500-1108302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
171, 5
               

               
Conread position:
               
215-383
               

               
Cow position:
               
chr10:6921688-6921844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
222-370
               

               
Cow position:
               
chr10:65130513-65130372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
227-383
               

               
Cow position:
               
chr10:2267067-2266921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
227-414
               

               
Cow position:
               
chr10:32560677-32560861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
162, 5
               

               
Conread position:
               
232-422
               

               
Cow position:
               
chr10:68853630-68853819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
118, 59
               

               
Conread position:
               
234-416
               

               
Cow position:
               
chr10:61426753-61426574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
151, 55
               

               
Conread position:
               
235-414
               

               
Cow position:
               
chr10:52069991-52069816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
147, 44
               

               
Conread position:
               
250-406
               

               
Cow position:
               
chr10:49586469-49586315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
132, 43
               

               
Conread position:
               
252-419
               

               
Cow position:
               
chr10:52889235-52889074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
259-425
               

               
Cow position:
               
chr10:61113195-61113356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
7, 30
               

               
Conread position:
               
265-406
               

               
Cow position:
               
chr10:64364229-64364368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
120, 23
               

               
Conread position:
               
307-413
               

               
Cow position:
               
chr10:42005545-42005438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
322-424
               

               
Cow position:
               
chr10:11086253-11086352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
68, 0
               
Show alignments to all cow chromosomes.