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Cow genome map

           
Conread name:
           
mE3-MI-P-E3-acw-d-07-1-UM.s1
        

               
Conread position:
               
1-174
               

               
Cow position:
               
chr14:42918360-42918188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
69, 9
               

               
Conread position:
               
1-176
               

               
Cow position:
               
chr14:33462429-33462255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
1-178
               

               
Cow position:
               
chr14:11641305-11641476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
1-183
               

               
Cow position:
               
chr14:23819026-23819199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
70, 8
               

               
Conread position:
               
1-183
               

               
Cow position:
               
chr14:41190610-41190787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
117, 9
               

               
Conread position:
               
1-194
               

               
Cow position:
               
chr14:17651575-17651758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr14:22909497-22909683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr14:46965829-46965635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
27, 9
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr14:10912703-10912893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr14:24797307-24797509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
88, 9
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr14:34163605-34163807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr14:12488432-12488635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr14:35650937-35651149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
111, 9
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr14:19624360-19624135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
82, 9
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr14:21964390-21964165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
111, 9
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr14:37624218-37624458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
202, 9
               

               
Conread position:
               
1-245
               

               
Cow position:
               
chr14:7270746-7270977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
1-245
               

               
Cow position:
               
chr14:19222151-19221904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
83, 9
               

               
Conread position:
               
1-245
               

               
Cow position:
               
chr14:24581194-24580954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
83, 9
               

               
Conread position:
               
1-245
               

               
Cow position:
               
chr14:24786203-24785971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
1-245
               

               
Cow position:
               
chr14:24992082-24991848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
117, 9
               

               
Conread position:
               
1-245
               

               
Cow position:
               
chr14:27312694-27312449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
112, 9
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr14:33209089-33209327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
198, 9
               

               
Conread position:
               
1-252
               

               
Cow position:
               
chr14:8964813-8964567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
67, 16
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr14:8754596-8754338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr14:39774785-39775049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
99, 9
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr14:28565881-28565615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
59, 13
               

               
Conread position:
               
1-273
               

               
Cow position:
               
chr14:15514289-15514011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
1-273
               

               
Cow position:
               
chr14:17899754-17899480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
110, 8
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr14:24837690-24837944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr14:33538656-33538945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
110, 9
               

               
Conread position:
               
1-281
               

               
Cow position:
               
chr14:12856866-12856588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
176, 9
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr14:39807189-39807471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
63, 9
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr14:3437260-3436974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
198, 9
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr14:6490434-6490716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
111, 9
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr14:20010041-20010327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
118, 9
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr14:22967022-22966739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr14:43249855-43249572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
72, 9
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr14:17755828-17755548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
98, 9
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr14:39821437-39821145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
63, 9
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr14:9308495-9308208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
69, 9
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr14:11507973-11508257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr14:16237235-16237534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
78, 137
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr14:36437216-36437508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
69, 9
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr14:23729458-23729739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
53, 9
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr14:34221324-34221037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 9
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr14:36709393-36709101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
68, 9
               

               
Conread position:
               
1-301
               

               
Cow position:
               
chr14:33714418-33714708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
202, 9
               

               
Conread position:
               
1-313
               

               
Cow position:
               
chr14:39877339-39877629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
90, 9
               

               
Conread position:
               
1-314
               

               
Cow position:
               
chr14:41471700-41472009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 8
               

               
Conread position:
               
1-315
               

               
Cow position:
               
chr14:46782124-46782435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
161, 8
               

               
Conread position:
               
1-318
               

               
Cow position:
               
chr14:10090825-10090515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
12, 46
               

               
Conread position:
               
1-327
               

               
Cow position:
               
chr14:25403674-25403987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
203, 9
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr14:27988919-27988600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
189, 13
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr14:44482795-44483112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
172, 9
               

               
Conread position:
               
1-331
               

               
Cow position:
               
chr14:39779023-39778696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
1-333
               

               
Cow position:
               
chr14:18448739-18449066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
111, 9
               

               
Conread position:
               
1-340
               

               
Cow position:
               
chr14:48412607-48412947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
69, 9
               

               
Conread position:
               
1-346
               

               
Cow position:
               
chr14:38143843-38144178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
206, 9
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr14:8102048-8101720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
198, 9
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr14:19593870-19594212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
198, 9
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr14:26097417-26097766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
89, 13
               

               
Conread position:
               
1-350
               

               
Cow position:
               
chr14:25779364-25779028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
66, 9
               

               
Conread position:
               
1-350
               

               
Cow position:
               
chr14:45605360-45605023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
1-350
               

               
Cow position:
               
chr14:47672613-47672957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
1-351
               

               
Cow position:
               
chr14:17841017-17841367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 8
               

               
Conread position:
               
1-353
               

               
Cow position:
               
chr14:31399845-31399518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
1-355
               

               
Cow position:
               
chr14:4991261-4990923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
195, 13
               

               
Conread position:
               
1-355
               

               
Cow position:
               
chr14:20640354-20640709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
1-355
               

               
Cow position:
               
chr14:28378634-28378280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
136, 9
               

               
Conread position:
               
1-355
               

               
Cow position:
               
chr14:31785246-31784890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 9
               

               
Conread position:
               
1-358
               

               
Cow position:
               
chr14:9901440-9901101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
193, 9
               

               
Conread position:
               
1-361
               

               
Cow position:
               
chr14:14466209-14466542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
1-370
               

               
Cow position:
               
chr14:19129781-19129413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 9
               

               
Conread position:
               
1-375
               

               
Cow position:
               
chr14:6541451-6541824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
75, 9
               

               
Conread position:
               
1-375
               

               
Cow position:
               
chr14:6735596-6735964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
121, 9
               

               
Conread position:
               
1-375
               

               
Cow position:
               
chr14:31130119-31130474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
219, 9
               

               
Conread position:
               
1-380
               

               
Cow position:
               
chr14:5630431-5630045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 9
               

               
Conread position:
               
1-380
               

               
Cow position:
               
chr14:14187603-14187221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
111, 9
               

               
Conread position:
               
1-380
               

               
Cow position:
               
chr14:18309040-18309423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
200, 9
               

               
Conread position:
               
1-380
               

               
Cow position:
               
chr14:39433991-39434377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
113, 50
               

               
Conread position:
               
1-382
               

               
Cow position:
               
chr14:25458591-25458235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
304, 9
               

               
Conread position:
               
1-383
               

               
Cow position:
               
chr14:23712956-23712569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
202, 9
               

               
Conread position:
               
1-388
               

               
Cow position:
               
chr14:39302093-39302490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
27, 9
               

               
Conread position:
               
1-406
               

               
Cow position:
               
chr14:11614952-11615354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 8
               

               
Conread position:
               
1-414
               

               
Cow position:
               
chr14:21018382-21017976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 9
               

               
Conread position:
               
1-415
               

               
Cow position:
               
chr14:10906987-10906589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
1-416
               

               
Cow position:
               
chr14:5836170-5835769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
195, 8
               

               
Conread position:
               
1-417
               

               
Cow position:
               
chr14:8488455-8488053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 9
               

               
Conread position:
               
1-419
               

               
Cow position:
               
chr14:6984697-6985098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
146, 9
               

               
Conread position:
               
1-419
               

               
Cow position:
               
chr14:26108910-26108488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 8
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr14:19863170-19863568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 9
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr14:24922376-24921933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr14:47138529-47138929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 9
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr14:25385621-25386034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 9
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr14:37884141-37884548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
1-423
               

               
Cow position:
               
chr14:10858701-10858272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 9
               

               
Conread position:
               
1-423
               

               
Cow position:
               
chr14:36554882-36555298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
72, 9
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr14:13927850-13928273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
125, 16
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr14:49021633-49022049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
82, 9
               

               
Conread position:
               
1-425
               

               
Cow position:
               
chr14:39918493-39918905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
56, 9
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr14:8540946-8541378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
116, 9
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr14:13810207-13809783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 9
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr14:44860971-44861384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 9
               

               
Conread position:
               
2-172
               

               
Cow position:
               
chr14:35084844-35085011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
54, 8
               

               
Conread position:
               
2-207
               

               
Cow position:
               
chr14:35711912-35712114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
2-255
               

               
Cow position:
               
chr14:21284899-21284638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
69, 8
               

               
Conread position:
               
2-265
               

               
Cow position:
               
chr14:20666751-20667013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
71, 140
               

               
Conread position:
               
2-348
               

               
Cow position:
               
chr14:12602145-12601814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
44, 8
               

               
Conread position:
               
2-348
               

               
Cow position:
               
chr14:20069252-20069578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
69, 8
               

               
Conread position:
               
3-188
               

               
Cow position:
               
chr14:5501883-5502078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
68, 144
               

               
Conread position:
               
3-202
               

               
Cow position:
               
chr14:29605968-29606163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
107, 7
               

               
Conread position:
               
3-256
               

               
Cow position:
               
chr14:36440178-36439937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
5, 34
               

               
Conread position:
               
3-271
               

               
Cow position:
               
chr14:37131927-37131653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
68, 140
               

               
Conread position:
               
3-271
               

               
Cow position:
               
chr14:41128162-41127893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
81, 120
               

               
Conread position:
               
3-271
               

               
Cow position:
               
chr14:50027483-50027224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
112, 35
               

               
Conread position:
               
3-302
               

               
Cow position:
               
chr14:25231380-25231682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
196, 81
               

               
Conread position:
               
3-310
               

               
Cow position:
               
chr14:50055670-50055360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
63, 149
               

               
Conread position:
               
3-360
               

               
Cow position:
               
chr14:9837623-9837978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
82, 141
               

               
Conread position:
               
3-380
               

               
Cow position:
               
chr14:47027108-47027476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 61
               

               
Conread position:
               
3-383
               

               
Cow position:
               
chr14:12559217-12559584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
64, 7
               

               
Conread position:
               
3-411
               

               
Cow position:
               
chr14:39769961-39770377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
68, 139
               

               
Conread position:
               
3-412
               

               
Cow position:
               
chr14:35700700-35700290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 118
               

               
Conread position:
               
3-413
               

               
Cow position:
               
chr14:37678729-37679142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 118
               

               
Conread position:
               
3-414
               

               
Cow position:
               
chr14:27104362-27103945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 7
               

               
Conread position:
               
3-415
               

               
Cow position:
               
chr14:37333960-37333559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 184
               

               
Conread position:
               
3-416
               

               
Cow position:
               
chr14:40034239-40033864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
382, 68
               

               
Conread position:
               
3-416
               

               
Cow position:
               
chr14:43032072-43031654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 7
               

               
Conread position:
               
3-420
               

               
Cow position:
               
chr14:7647770-7648167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 67
               

               
Conread position:
               
3-425
               

               
Cow position:
               
chr14:34355433-34355850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
115, 39
               

               
Conread position:
               
3-426
               

               
Cow position:
               
chr14:15990463-15990077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
45, 85
               

               
Conread position:
               
4-294
               

               
Cow position:
               
chr14:11043222-11043513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
67, 116
               

               
Conread position:
               
4-295
               

               
Cow position:
               
chr14:19957643-19957930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
172, 108
               

               
Conread position:
               
4-413
               

               
Cow position:
               
chr14:47974247-47973847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
106, 65
               

               
Conread position:
               
4-425
               

               
Cow position:
               
chr14:7582174-7582594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 6
               

               
Conread position:
               
4-426
               

               
Cow position:
               
chr14:21691012-21691428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 59
               

               
Conread position:
               
7-256
               

               
Cow position:
               
chr14:19814293-19814528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
51, 18
               

               
Conread position:
               
7-287
               

               
Cow position:
               
chr14:46751942-46751657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
79, 110
               

               
Conread position:
               
7-339
               

               
Cow position:
               
chr14:25378226-25378559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 188
               

               
Conread position:
               
9-416
               

               
Cow position:
               
chr14:38355445-38355047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 25
               

               
Conread position:
               
9-417
               

               
Cow position:
               
chr14:43046406-43046014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
192, 27
               

               
Conread position:
               
10-382
               

               
Cow position:
               
chr14:18904346-18904713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 133
               

               
Conread position:
               
12-185
               

               
Cow position:
               
chr14:39518956-39518782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
49, 81
               

               
Conread position:
               
12-188
               

               
Cow position:
               
chr14:37138075-37138248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
12-197
               

               
Cow position:
               
chr14:15913291-15913473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
104, 70
               

               
Conread position:
               
12-200
               

               
Cow position:
               
chr14:19633442-19633251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
59, 132
               

               
Conread position:
               
12-227
               

               
Cow position:
               
chr14:6419052-6419259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
12-236
               

               
Cow position:
               
chr14:12249936-12250161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
51, 74
               

               
Conread position:
               
12-252
               

               
Cow position:
               
chr14:11819864-11820101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
12-255
               

               
Cow position:
               
chr14:7482315-7482072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
59, 43
               

               
Conread position:
               
12-256
               

               
Cow position:
               
chr14:15033015-15032769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
155, 71
               

               
Conread position:
               
12-259
               

               
Cow position:
               
chr14:48492524-48492779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
59, 137
               

               
Conread position:
               
12-262
               

               
Cow position:
               
chr14:33791449-33791197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
61, 131
               

               
Conread position:
               
12-266
               

               
Cow position:
               
chr14:35498241-35498500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
72, 89
               

               
Conread position:
               
12-268
               

               
Cow position:
               
chr14:41756519-41756267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
102, 59
               

               
Conread position:
               
12-277
               

               
Cow position:
               
chr14:33828409-33828156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
100, 24
               

               
Conread position:
               
12-280
               

               
Cow position:
               
chr14:18238399-18238133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
47, 24
               

               
Conread position:
               
12-284
               

               
Cow position:
               
chr14:28007868-28007597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
59, 130
               

               
Conread position:
               
12-287
               

               
Cow position:
               
chr14:106315-106583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
59, 106
               

               
Conread position:
               
12-289
               

               
Cow position:
               
chr14:25362607-25362326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
57, 97
               

               
Conread position:
               
12-291
               

               
Cow position:
               
chr14:40433181-40432905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
59, 16
               

               
Conread position:
               
12-294
               

               
Cow position:
               
chr14:35420497-35420786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
51, 136
               

               
Conread position:
               
12-294
               

               
Cow position:
               
chr14:37890110-37889839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
100, 71
               

               
Conread position:
               
12-295
               

               
Cow position:
               
chr14:49086565-49086284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
110, 80
               

               
Conread position:
               
12-331
               

               
Cow position:
               
chr14:20712422-20712743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
28, 138
               

               
Conread position:
               
12-338
               

               
Cow position:
               
chr14:35018496-35018816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
189, 119
               

               
Conread position:
               
12-346
               

               
Cow position:
               
chr14:18941044-18941356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
105, 94
               

               
Conread position:
               
12-346
               

               
Cow position:
               
chr14:19372603-19372268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
68, 130
               

               
Conread position:
               
12-346
               

               
Cow position:
               
chr14:41749503-41749830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
155, 49
               

               
Conread position:
               
12-350
               

               
Cow position:
               
chr14:20600641-20600308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
52, 79
               

               
Conread position:
               
12-350
               

               
Cow position:
               
chr14:24981714-24981384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
110, 43
               

               
Conread position:
               
12-355
               

               
Cow position:
               
chr14:13846246-13845907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
149, 126
               

               
Conread position:
               
12-355
               

               
Cow position:
               
chr14:34199582-34199922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
57, 135
               

               
Conread position:
               
12-355
               

               
Cow position:
               
chr14:42154701-42155053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
59, 131
               

               
Conread position:
               
12-397
               

               
Cow position:
               
chr14:47551013-47551397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 214
               

               
Conread position:
               
12-404
               

               
Cow position:
               
chr14:26449008-26448632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
151, 124
               

               
Conread position:
               
12-415
               

               
Cow position:
               
chr14:33773791-33774184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
65, 132
               

               
Conread position:
               
12-418
               

               
Cow position:
               
chr14:33247178-33247581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
98, 52
               

               
Conread position:
               
12-418
               

               
Cow position:
               
chr14:36167193-36166777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
166, 52
               

               
Conread position:
               
12-420
               

               
Cow position:
               
chr14:6599694-6600117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
104, 51
               

               
Conread position:
               
12-421
               

               
Cow position:
               
chr14:14621925-14622334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
110, 24
               

               
Conread position:
               
12-426
               

               
Cow position:
               
chr14:20796053-20795625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 299
               

               
Conread position:
               
12-426
               

               
Cow position:
               
chr14:40230377-40230806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
89, 71
               

               
Conread position:
               
12-426
               

               
Cow position:
               
chr14:41211116-41210693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
59, 130
               

               
Conread position:
               
13-271
               

               
Cow position:
               
chr14:33326135-33326395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
101, 15
               

               
Conread position:
               
13-280
               

               
Cow position:
               
chr14:44237441-44237732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
57, 135
               

               
Conread position:
               
13-282
               

               
Cow position:
               
chr14:12484289-12484575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
62, 94
               

               
Conread position:
               
13-283
               

               
Cow position:
               
chr14:14222034-14221759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
58, 209
               

               
Conread position:
               
13-287
               

               
Cow position:
               
chr14:20932877-20932598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
64, 130
               

               
Conread position:
               
13-287
               

               
Cow position:
               
chr14:32452515-32452233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
57, 127
               

               
Conread position:
               
13-294
               

               
Cow position:
               
chr14:16834589-16834300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
118, 56
               

               
Conread position:
               
13-294
               

               
Cow position:
               
chr14:27305415-27305122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
60, 133
               

               
Conread position:
               
13-294
               

               
Cow position:
               
chr14:34124918-34125206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
58, 36
               

               
Conread position:
               
13-349
               

               
Cow position:
               
chr14:18345471-18345803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
58, 130
               

               
Conread position:
               
13-350
               

               
Cow position:
               
chr14:28114924-28115261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
58, 132
               

               
Conread position:
               
13-361
               

               
Cow position:
               
chr14:46962799-46962465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
58, 205
               

               
Conread position:
               
13-375
               

               
Cow position:
               
chr14:48427335-48426975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
58, 130
               

               
Conread position:
               
13-417
               

               
Cow position:
               
chr14:30662246-30661862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
71, 125
               

               
Conread position:
               
13-425
               

               
Cow position:
               
chr14:19189298-19188898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
58, 129
               

               
Conread position:
               
14-187
               

               
Cow position:
               
chr14:46735570-46735389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
14-230
               

               
Cow position:
               
chr14:23464557-23464776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
60, 22
               

               
Conread position:
               
14-286
               

               
Cow position:
               
chr14:41809394-41809668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
70, 38
               

               
Conread position:
               
14-287
               

               
Cow position:
               
chr14:41479401-41479678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
42, 132
               

               
Conread position:
               
14-293
               

               
Cow position:
               
chr14:48446902-48447185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
70, 132
               

               
Conread position:
               
14-294
               

               
Cow position:
               
chr14:40165679-40165402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
59, 41
               

               
Conread position:
               
14-343
               

               
Cow position:
               
chr14:20384723-20385053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
14, 132
               

               
Conread position:
               
14-345
               

               
Cow position:
               
chr14:34984122-34983797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
76, 129
               

               
Conread position:
               
14-346
               

               
Cow position:
               
chr14:1645931-1646255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
57, 128
               

               
Conread position:
               
14-346
               

               
Cow position:
               
chr14:27848458-27848114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
57, 127
               

               
Conread position:
               
14-355
               

               
Cow position:
               
chr14:15054728-15055070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
57, 126
               

               
Conread position:
               
14-375
               

               
Cow position:
               
chr14:20016449-20016807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
98, 25
               

               
Conread position:
               
14-419
               

               
Cow position:
               
chr14:24387709-24387287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
63, 121
               

               
Conread position:
               
14-423
               

               
Cow position:
               
chr14:26960181-26960563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 124
               

               
Conread position:
               
16-299
               

               
Cow position:
               
chr14:38337888-38338161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
41, 128
               

               
Conread position:
               
17-271
               

               
Cow position:
               
chr14:27591700-27591957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
82, 100
               

               
Conread position:
               
17-272
               

               
Cow position:
               
chr14:6175838-6175583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
53, 75
               

               
Conread position:
               
17-345
               

               
Cow position:
               
chr14:33309254-33309573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
52, 85
               

               
Conread position:
               
17-380
               

               
Cow position:
               
chr14:22381300-22381676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
184, 101
               

               
Conread position:
               
17-419
               

               
Cow position:
               
chr14:8786294-8786701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
46, 126
               

               
Conread position:
               
17-419
               

               
Cow position:
               
chr14:49048892-49049287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
113, 83
               

               
Conread position:
               
19-266
               

               
Cow position:
               
chr14:9875642-9875404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
19-281
               

               
Cow position:
               
chr14:47584396-47584667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
69, 130
               

               
Conread position:
               
20-285
               

               
Cow position:
               
chr14:47591667-47591928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
53, 22
               

               
Conread position:
               
20-421
               

               
Cow position:
               
chr14:10721483-10721868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
195, 44
               

               
Conread position:
               
21-296
               

               
Cow position:
               
chr14:35605058-35605335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
49, 77
               

               
Conread position:
               
21-355
               

               
Cow position:
               
chr14:1977828-1978152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
43, 71
               

               
Conread position:
               
22-200
               

               
Cow position:
               
chr14:34777329-34777504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
42, 117
               

               
Conread position:
               
22-247
               

               
Cow position:
               
chr14:31479104-31479322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
90, 118
               

               
Conread position:
               
22-297
               

               
Cow position:
               
chr14:3564525-3564259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
36, 95
               

               
Conread position:
               
22-406
               

               
Cow position:
               
chr14:39037479-39037088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
96, 49
               

               
Conread position:
               
22-422
               

               
Cow position:
               
chr14:20865075-20865457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
176, 24
               

               
Conread position:
               
24-262
               

               
Cow position:
               
chr14:8750322-8750080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
168, 112
               

               
Conread position:
               
27-214
               

               
Cow position:
               
chr14:12484058-12484243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
165, 53
               

               
Conread position:
               
27-287
               

               
Cow position:
               
chr14:20467859-20468111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
32, 117
               

               
Conread position:
               
27-295
               

               
Cow position:
               
chr14:3588200-3588463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
44, 74
               

               
Conread position:
               
27-301
               

               
Cow position:
               
chr14:8784424-8784166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
27-404
               

               
Cow position:
               
chr14:14182587-14182202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 61
               

               
Conread position:
               
27-420
               

               
Cow position:
               
chr14:9020272-9019876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
40, 59
               

               
Conread position:
               
27-422
               

               
Cow position:
               
chr14:23107574-23107170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 210
               

               
Conread position:
               
27-424
               

               
Cow position:
               
chr14:47604055-47604445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 59
               

               
Conread position:
               
28-280
               

               
Cow position:
               
chr14:33643547-33643785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
87, 55
               

               
Conread position:
               
28-355
               

               
Cow position:
               
chr14:13043005-13042678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
47, 119
               

               
Conread position:
               
28-355
               

               
Cow position:
               
chr14:32371499-32371819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
43, 78
               

               
Conread position:
               
29-252
               

               
Cow position:
               
chr14:33337236-33337464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
42, 103
               

               
Conread position:
               
29-268
               

               
Cow position:
               
chr14:27919495-27919736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
82, 76
               

               
Conread position:
               
29-280
               

               
Cow position:
               
chr14:33338238-33338484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
41, 36
               

               
Conread position:
               
30-276
               

               
Cow position:
               
chr14:16033249-16033000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
16, 36
               

               
Conread position:
               
30-416
               

               
Cow position:
               
chr14:6789618-6789243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
56, 44
               

               
Conread position:
               
30-423
               

               
Cow position:
               
chr14:24417129-24416726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
54, 112
               

               
Conread position:
               
31-350
               

               
Cow position:
               
chr14:20110479-20110797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
45, 114
               

               
Conread position:
               
32-213
               

               
Cow position:
               
chr14:22952758-22952935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
86, 36
               

               
Conread position:
               
33-280
               

               
Cow position:
               
chr14:12324663-12324409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
79, 106
               

               
Conread position:
               
33-345
               

               
Cow position:
               
chr14:24237064-24236756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
19, 111
               

               
Conread position:
               
36-294
               

               
Cow position:
               
chr14:14948974-14949235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
37, 109
               

               
Conread position:
               
36-355
               

               
Cow position:
               
chr14:12520073-12520381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
77, 104
               

               
Conread position:
               
36-394
               

               
Cow position:
               
chr14:37447242-37447582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
82, 5
               

               
Conread position:
               
38-327
               

               
Cow position:
               
chr14:25002270-25001983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
49, 104
               

               
Conread position:
               
38-419
               

               
Cow position:
               
chr14:26490510-26490882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
79, 65
               

               
Conread position:
               
42-330
               

               
Cow position:
               
chr14:32581151-32581434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
6, 58
               

               
Conread position:
               
45-347
               

               
Cow position:
               
chr14:10078493-10078196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
138, 71
               

               
Conread position:
               
48-348
               

               
Cow position:
               
chr14:20826696-20826418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
49-346
               

               
Cow position:
               
chr14:38747885-38747607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
68, 39
               

               
Conread position:
               
55-278
               

               
Cow position:
               
chr14:6208129-6208353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
142, 83
               

               
Conread position:
               
55-353
               

               
Cow position:
               
chr14:48740661-48740945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
217, 25
               

               
Conread position:
               
55-425
               

               
Cow position:
               
chr14:43865715-43866078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
141, 64
               

               
Conread position:
               
58-287
               

               
Cow position:
               
chr14:27338557-27338325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
58, 86
               

               
Conread position:
               
58-294
               

               
Cow position:
               
chr14:8945867-8946106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
15, 85
               

               
Conread position:
               
58-338
               

               
Cow position:
               
chr14:33830510-33830239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
60, 82
               

               
Conread position:
               
59-295
               

               
Cow position:
               
chr14:14417284-14417519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
26, 58
               

               
Conread position:
               
65-347
               

               
Cow position:
               
chr14:36254502-36254768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
26, 9
               

               
Conread position:
               
66-256
               

               
Cow position:
               
chr14:14581071-14580884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
46, 75
               

               
Conread position:
               
66-286
               

               
Cow position:
               
chr14:19394565-19394346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
56, 76
               

               
Conread position:
               
66-294
               

               
Cow position:
               
chr14:26190894-26191126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
58, 50
               

               
Conread position:
               
66-296
               

               
Cow position:
               
chr14:5573147-5572919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
84, 33
               

               
Conread position:
               
66-335
               

               
Cow position:
               
chr14:10742708-10742456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
49, 71
               

               
Conread position:
               
67-202
               

               
Cow position:
               
chr14:41654195-41654329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
67-259
               

               
Cow position:
               
chr14:26628038-26627842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
136, 160
               

               
Conread position:
               
67-281
               

               
Cow position:
               
chr14:25986721-25986506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
46, 75
               

               
Conread position:
               
67-331
               

               
Cow position:
               
chr14:41180497-41180770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
77, 16
               

               
Conread position:
               
67-424
               

               
Cow position:
               
chr14:15997563-15997921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
47, 59
               

               
Conread position:
               
67-425
               

               
Cow position:
               
chr14:16256970-16256604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
129, 71
               

               
Conread position:
               
67-426
               

               
Cow position:
               
chr14:19618548-19618914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
132, 61
               

               
Conread position:
               
68-422
               

               
Cow position:
               
chr14:22459673-22459999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 54
               

               
Conread position:
               
69-255
               

               
Cow position:
               
chr14:35819410-35819597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
128, 69
               

               
Conread position:
               
71-362
               

               
Cow position:
               
chr14:20435595-20435305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 94
               

               
Conread position:
               
74-349
               

               
Cow position:
               
chr14:38921146-38920879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
147, 67
               

               
Conread position:
               
74-367
               

               
Cow position:
               
chr14:44594937-44595215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
124, 64
               

               
Conread position:
               
83-421
               

               
Cow position:
               
chr14:44084292-44084642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
121, 7
               

               
Conread position:
               
85-318
               

               
Cow position:
               
chr14:21933155-21933386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
117, 51
               

               
Conread position:
               
85-346
               

               
Cow position:
               
chr14:4202907-4203169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
28, 57
               

               
Conread position:
               
89-350
               

               
Cow position:
               
chr14:12035590-12035334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
38, 51
               

               
Conread position:
               
90-295
               

               
Cow position:
               
chr14:24608147-24607944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
84, 51
               

               
Conread position:
               
90-350
               

               
Cow position:
               
chr14:4877050-4877304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
22, 58
               

               
Conread position:
               
90-351
               

               
Cow position:
               
chr14:1868202-1868459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
25, 18
               

               
Conread position:
               
90-377
               

               
Cow position:
               
chr14:1859433-1859723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
35, 53
               

               
Conread position:
               
90-424
               

               
Cow position:
               
chr14:16549823-16550163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
119, 49
               

               
Conread position:
               
91-349
               

               
Cow position:
               
chr14:27077165-27076903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
98, 45
               

               
Conread position:
               
92-369
               

               
Cow position:
               
chr14:22657419-22657156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
113, 73
               

               
Conread position:
               
93-389
               

               
Cow position:
               
chr14:46654367-46654651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
105, 33
               

               
Conread position:
               
96-426
               

               
Cow position:
               
chr14:12511726-12512062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
23, 46
               

               
Conread position:
               
99-266
               

               
Cow position:
               
chr14:22472840-22473008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
87, 5
               

               
Conread position:
               
99-364
               

               
Cow position:
               
chr14:14317053-14316797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
110, 33
               

               
Conread position:
               
99-408
               

               
Cow position:
               
chr14:25639606-25639906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
17, 65
               

               
Conread position:
               
100-380
               

               
Cow position:
               
chr14:46998217-46997929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
15, 42
               

               
Conread position:
               
106-346
               

               
Cow position:
               
chr14:35503528-35503289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
57, 10
               

               
Conread position:
               
108-404
               

               
Cow position:
               
chr14:45849056-45849347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 125
               

               
Conread position:
               
110-426
               

               
Cow position:
               
chr14:23424418-23424093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
191, 31
               

               
Conread position:
               
110-426
               

               
Cow position:
               
chr14:23443179-23442854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
191, 31
               

               
Conread position:
               
111-346
               

               
Cow position:
               
chr14:22941562-22941799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
88, 30
               

               
Conread position:
               
111-353
               

               
Cow position:
               
chr14:40754085-40754324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
69, 8
               

               
Conread position:
               
112-369
               

               
Cow position:
               
chr14:19951728-19951470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
89, 29
               

               
Conread position:
               
112-421
               

               
Cow position:
               
chr14:2189798-2189488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 125
               

               
Conread position:
               
116-274
               

               
Cow position:
               
chr14:6226472-6226628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
117-383
               

               
Cow position:
               
chr14:20045707-20045444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
80, 122
               

               
Conread position:
               
121-301
               

               
Cow position:
               
chr14:18763295-18763468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
174, 19
               

               
Conread position:
               
123-364
               

               
Cow position:
               
chr14:29698210-29698451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
74, 16
               

               
Conread position:
               
123-420
               

               
Cow position:
               
chr14:41252841-41253144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
65, 18
               

               
Conread position:
               
141-330
               

               
Cow position:
               
chr14:41302702-41302885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
67, 55
               

               
Conread position:
               
141-355
               

               
Cow position:
               
chr14:42419143-42419352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
53, 87
               

               
Conread position:
               
141-387
               

               
Cow position:
               
chr14:34256793-34257034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
76, 89
               

               
Conread position:
               
141-414
               

               
Cow position:
               
chr14:18979069-18979333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
53, 87
               

               
Conread position:
               
141-423
               

               
Cow position:
               
chr14:37422657-37422941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
57, 83
               

               
Conread position:
               
141-425
               

               
Cow position:
               
chr14:8903487-8903758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
49, 89
               

               
Conread position:
               
141-425
               

               
Cow position:
               
chr14:23478951-23478678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
70, 37
               

               
Conread position:
               
141-426
               

               
Cow position:
               
chr14:30179382-30179682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
37, 99
               

               
Conread position:
               
142-417
               

               
Cow position:
               
chr14:1868668-1868950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
103, 21
               

               
Conread position:
               
142-417
               

               
Cow position:
               
chr14:16352475-16352196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
56, 88
               

               
Conread position:
               
143-409
               

               
Cow position:
               
chr14:33553315-33553060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
37, 91
               

               
Conread position:
               
144-382
               

               
Cow position:
               
chr14:12127284-12127522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
48, 54
               

               
Conread position:
               
144-417
               

               
Cow position:
               
chr14:23050505-23050755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
237, 55
               

               
Conread position:
               
145-346
               

               
Cow position:
               
chr14:42437152-42436954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
54, 86
               

               
Conread position:
               
147-346
               

               
Cow position:
               
chr14:4282383-4282577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
51, 83
               

               
Conread position:
               
147-411
               

               
Cow position:
               
chr14:2038690-2038942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
56, 40
               

               
Conread position:
               
147-412
               

               
Cow position:
               
chr14:28565586-28565338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
148-418
               

               
Cow position:
               
chr14:39058705-39058432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
56, 9
               

               
Conread position:
               
152-417
               

               
Cow position:
               
chr14:23008297-23008046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
47, 61
               

               
Conread position:
               
152-421
               

               
Cow position:
               
chr14:12954263-12954541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
26, 13
               

               
Conread position:
               
154-422
               

               
Cow position:
               
chr14:37866154-37866437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
34, 77
               

               
Conread position:
               
155-415
               

               
Cow position:
               
chr14:26493998-26493731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
16, 84
               

               
Conread position:
               
158-308
               

               
Cow position:
               
chr14:29543920-29544071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
45, 73
               

               
Conread position:
               
169-416
               

               
Cow position:
               
chr14:20429685-20429432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
35, 54
               

               
Conread position:
               
171-379
               

               
Cow position:
               
chr14:21084444-21084237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
26, 63
               

               
Conread position:
               
173-420
               

               
Cow position:
               
chr14:10692167-10692407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
25, 61
               

               
Conread position:
               
182-416
               

               
Cow position:
               
chr14:6442001-6441765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
27, 47
               

               
Conread position:
               
190-415
               

               
Cow position:
               
chr14:28605316-28605091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
18, 43
               

               
Conread position:
               
201-416
               

               
Cow position:
               
chr14:19022830-19023039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
184, 28
               

               
Conread position:
               
205-383
               

               
Cow position:
               
chr14:21369428-21369261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
170, 30
               

               
Conread position:
               
208-415
               

               
Cow position:
               
chr14:47519691-47519893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
181, 21
               

               
Conread position:
               
218-419
               

               
Cow position:
               
chr14:41531613-41531808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
176, 11
               

               
Conread position:
               
223-424
               

               
Cow position:
               
chr14:36080871-36081065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
158, 35
               

               
Conread position:
               
225-420
               

               
Cow position:
               
chr14:26153224-26153415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
21, 42
               

               
Conread position:
               
227-417
               

               
Cow position:
               
chr14:44032079-44031891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
162, 66
               

               
Conread position:
               
227-418
               

               
Cow position:
               
chr14:20701776-20701961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
154, 31
               

               
Conread position:
               
229-418
               

               
Cow position:
               
chr14:37624732-37624914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
164, 29
               

               
Conread position:
               
229-426
               

               
Cow position:
               
chr14:9065934-9065741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
156, 62
               

               
Conread position:
               
234-385
               

               
Cow position:
               
chr14:5400621-5400475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
240-411
               

               
Cow position:
               
chr14:26805020-26805189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
141, 51
               

               
Conread position:
               
249-423
               

               
Cow position:
               
chr14:47600388-47600555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
133, 37
               

               
Conread position:
               
259-383
               

               
Cow position:
               
chr14:20284166-20284046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
22, 31
               

               
Conread position:
               
263-412
               

               
Cow position:
               
chr14:22473230-22473375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
122, 28
               

               
Conread position:
               
296-420
               

               
Cow position:
               
chr14:30790385-30790510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
95, 37
               

               
Conread position:
               
298-414
               

               
Cow position:
               
chr14:7614039-7613922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
91, 46
               
Show alignments to all cow chromosomes.