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Cow genome map

           
Conread name:
           
mE3-MI-P-E3-acw-d-07-1-UM.s1
        

               
Conread position:
               
1-129
               

               
Cow position:
               
chr17:9057151-9057025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
1-174
               

               
Cow position:
               
chr17:3182771-3182599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
62, 9
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chr17:1328157-1327984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
69, 9
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr17:20835407-20835589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
63, 9
               

               
Conread position:
               
1-182
               

               
Cow position:
               
chr17:29040651-29040472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
111, 9
               

               
Conread position:
               
1-183
               

               
Cow position:
               
chr17:36817756-36817936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr17:21017608-21017803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr17:3306681-3306874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr17:11056560-11056362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
53, 9
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr17:35990910-35991106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
39, 13
               

               
Conread position:
               
1-198
               

               
Cow position:
               
chr17:12216263-12216063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
69, 9
               

               
Conread position:
               
1-199
               

               
Cow position:
               
chr17:4824308-4824506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
68, 8
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr17:7890365-7890158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
118, 9
               

               
Conread position:
               
1-216
               

               
Cow position:
               
chr17:2079574-2079788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
88, 13
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr17:5041861-5041651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
187, 8
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr17:1275333-1275567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
41, 9
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr17:15363748-15363522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
204, 8
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr17:41029767-41030000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
123, 9
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr17:21312991-21312759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
197, 9
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr17:42347407-42347172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
197, 9
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr17:16895480-16895254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr17:36533188-36533425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
69, 9
               

               
Conread position:
               
1-245
               

               
Cow position:
               
chr17:242450-242695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
100, 9
               

               
Conread position:
               
1-250
               

               
Cow position:
               
chr17:21207321-21207079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr17:27305972-27306226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
100, 9
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr17:13236912-13236655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
44, 9
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr17:18245889-18246149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
53, 9
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr17:25590423-25590166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
85, 221
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr17:32950086-32950343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
83, 16
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr17:42435819-42435574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
27, 9
               

               
Conread position:
               
1-260
               

               
Cow position:
               
chr17:9778065-9778315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
117, 9
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr17:6624072-6624334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
113, 9
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr17:15333897-15333628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
85, 9
               

               
Conread position:
               
1-272
               

               
Cow position:
               
chr17:22563997-22564277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
117, 9
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr17:2006515-2006781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
41, 9
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr17:27679430-27679145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr17:25999930-26000214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
76, 13
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr17:34316895-34316619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr17:7132641-7132340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr17:10528927-10528629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr17:18592254-18592541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr17:21335884-21335593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr17:35126528-35126812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
195, 9
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr17:20090807-20090534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr17:34079284-34079008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
117, 13
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr17:11839512-11839827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
59, 9
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr17:17060868-17060577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
45, 9
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr17:20033102-20032807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr17:21115134-21114849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
181, 9
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr17:26230753-26231059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
63, 9
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr17:27274376-27274671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
111, 9
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr17:28539851-28540133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
112, 8
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr17:30529722-30529440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
111, 13
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr17:33288840-33288552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
198, 13
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr17:23063526-23063825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
111, 13
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr17:25145494-25145222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr17:30665086-30665378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
117, 9
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr17:32419304-32419005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
72, 9
               

               
Conread position:
               
1-305
               

               
Cow position:
               
chr17:30539433-30539150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
1-310
               

               
Cow position:
               
chr17:5006677-5006369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
35, 9
               

               
Conread position:
               
1-315
               

               
Cow position:
               
chr17:11304851-11305153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
209, 9
               

               
Conread position:
               
1-324
               

               
Cow position:
               
chr17:11374876-11374565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
194, 9
               

               
Conread position:
               
1-331
               

               
Cow position:
               
chr17:24824066-24824381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
187, 9
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr17:16371065-16371410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
1-346
               

               
Cow position:
               
chr17:9911577-9911911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
35, 9
               

               
Conread position:
               
1-346
               

               
Cow position:
               
chr17:18495696-18495366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
187, 13
               

               
Conread position:
               
1-346
               

               
Cow position:
               
chr17:25128535-25128199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
81, 9
               

               
Conread position:
               
1-346
               

               
Cow position:
               
chr17:43717499-43717182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr17:4213570-4213898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr17:17452788-17452469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr17:26084848-26085177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr17:21739070-21738715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr17:22806727-22806387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
1-350
               

               
Cow position:
               
chr17:6936849-6936523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
201, 9
               

               
Conread position:
               
1-350
               

               
Cow position:
               
chr17:9746332-9746670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
201, 9
               

               
Conread position:
               
1-350
               

               
Cow position:
               
chr17:9853800-9854135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
66, 9
               

               
Conread position:
               
1-350
               

               
Cow position:
               
chr17:24553818-24554155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
1-355
               

               
Cow position:
               
chr17:13940508-13940159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
80, 9
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr17:34864386-34864731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
111, 9
               

               
Conread position:
               
1-358
               

               
Cow position:
               
chr17:25707769-25708121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
69, 9
               

               
Conread position:
               
1-361
               

               
Cow position:
               
chr17:20848344-20848691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
117, 8
               

               
Conread position:
               
1-361
               

               
Cow position:
               
chr17:25181335-25180982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
1-371
               

               
Cow position:
               
chr17:8926406-8926039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
1-376
               

               
Cow position:
               
chr17:44861982-44861609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
57, 8
               

               
Conread position:
               
1-379
               

               
Cow position:
               
chr17:37163713-37163340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
1-391
               

               
Cow position:
               
chr17:41892254-41891866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 8
               

               
Conread position:
               
1-395
               

               
Cow position:
               
chr17:15103074-15102691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
70, 13
               

               
Conread position:
               
1-406
               

               
Cow position:
               
chr17:3042293-3042691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
118, 9
               

               
Conread position:
               
1-406
               

               
Cow position:
               
chr17:10271305-10271698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 13
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr17:25189093-25189507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
82, 13
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chr17:5380781-5381171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 8
               

               
Conread position:
               
1-412
               

               
Cow position:
               
chr17:36217369-36216965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
21, 9
               

               
Conread position:
               
1-414
               

               
Cow position:
               
chr17:144361-143957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
1-414
               

               
Cow position:
               
chr17:33933923-33933506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
198, 9
               

               
Conread position:
               
1-415
               

               
Cow position:
               
chr17:24580486-24580071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
1-415
               

               
Cow position:
               
chr17:27429392-27429799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
1-416
               

               
Cow position:
               
chr17:21243973-21243565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
60, 9
               

               
Conread position:
               
1-416
               

               
Cow position:
               
chr17:26818639-26818228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
67, 9
               

               
Conread position:
               
1-417
               

               
Cow position:
               
chr17:5224217-5224622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
105, 9
               

               
Conread position:
               
1-418
               

               
Cow position:
               
chr17:11216069-11215647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
191, 9
               

               
Conread position:
               
1-418
               

               
Cow position:
               
chr17:23803282-23803683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 9
               

               
Conread position:
               
1-419
               

               
Cow position:
               
chr17:23147242-23147647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 9
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr17:19891429-19891850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 8
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chr17:21004017-21003582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
78, 9
               

               
Conread position:
               
1-423
               

               
Cow position:
               
chr17:13922289-13922733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 9
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr17:9748584-9748983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
204, 9
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr17:27819114-27819524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 9
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr17:30236039-30236423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 9
               

               
Conread position:
               
1-425
               

               
Cow position:
               
chr17:29292553-29292137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
88, 9
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr17:4601734-4601308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr17:10634243-10633813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
202, 9
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr17:18720634-18720198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
113, 9
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr17:20157429-20157862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
187, 9
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr17:27504940-27505331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
336, 8
               

               
Conread position:
               
2-348
               

               
Cow position:
               
chr17:25740765-25741101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
62, 8
               

               
Conread position:
               
2-355
               

               
Cow position:
               
chr17:18472990-18473328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
77, 137
               

               
Conread position:
               
2-406
               

               
Cow position:
               
chr17:8279894-8279500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 8
               

               
Conread position:
               
2-426
               

               
Cow position:
               
chr17:18173990-18173596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
201, 8
               

               
Conread position:
               
3-189
               

               
Cow position:
               
chr17:21419247-21419437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
3-195
               

               
Cow position:
               
chr17:19455488-19455305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
3-222
               

               
Cow position:
               
chr17:18494697-18494483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
3-243
               

               
Cow position:
               
chr17:16307196-16307430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
3-256
               

               
Cow position:
               
chr17:3781860-3782115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
198, 154
               

               
Conread position:
               
3-294
               

               
Cow position:
               
chr17:30204471-30204766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
195, 245
               

               
Conread position:
               
3-335
               

               
Cow position:
               
chr17:27697877-27697560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
200, 7
               

               
Conread position:
               
3-346
               

               
Cow position:
               
chr17:5767729-5768058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
85, 136
               

               
Conread position:
               
3-355
               

               
Cow position:
               
chr17:17059254-17059585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
193, 50
               

               
Conread position:
               
3-355
               

               
Cow position:
               
chr17:27047978-27048317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
115, 24
               

               
Conread position:
               
3-361
               

               
Cow position:
               
chr17:40741462-40741820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
109, 82
               

               
Conread position:
               
3-375
               

               
Cow position:
               
chr17:24587433-24587803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
68, 140
               

               
Conread position:
               
3-377
               

               
Cow position:
               
chr17:18860904-18860536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 93
               

               
Conread position:
               
3-380
               

               
Cow position:
               
chr17:5000761-5000395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
329, 68
               

               
Conread position:
               
3-383
               

               
Cow position:
               
chr17:39012535-39012908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 11
               

               
Conread position:
               
3-409
               

               
Cow position:
               
chr17:33999228-33998843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 7
               

               
Conread position:
               
3-414
               

               
Cow position:
               
chr17:20215987-20216390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 7
               

               
Conread position:
               
3-418
               

               
Cow position:
               
chr17:12536653-12536225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 136
               

               
Conread position:
               
3-426
               

               
Cow position:
               
chr17:32457764-32457336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 7
               

               
Conread position:
               
4-250
               

               
Cow position:
               
chr17:1526541-1526289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
66, 13
               

               
Conread position:
               
4-256
               

               
Cow position:
               
chr17:3471237-3471487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
114, 60
               

               
Conread position:
               
4-281
               

               
Cow position:
               
chr17:2034361-2034622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
194, 50
               

               
Conread position:
               
4-370
               

               
Cow position:
               
chr17:8544122-8544483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
120, 134
               

               
Conread position:
               
4-423
               

               
Cow position:
               
chr17:923694-924109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 90
               

               
Conread position:
               
4-424
               

               
Cow position:
               
chr17:11171611-11172018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 88
               

               
Conread position:
               
5-248
               

               
Cow position:
               
chr17:33926308-33926063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
59, 102
               

               
Conread position:
               
7-202
               

               
Cow position:
               
chr17:34628662-34628466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
7-295
               

               
Cow position:
               
chr17:18824609-18824893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
125, 222
               

               
Conread position:
               
7-421
               

               
Cow position:
               
chr17:35388194-35387771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 131
               

               
Conread position:
               
8-277
               

               
Cow position:
               
chr17:3466655-3466913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
193, 53
               

               
Conread position:
               
9-263
               

               
Cow position:
               
chr17:23880007-23879746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
45, 124
               

               
Conread position:
               
9-282
               

               
Cow position:
               
chr17:5688527-5688267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
106, 43
               

               
Conread position:
               
10-294
               

               
Cow position:
               
chr17:4967931-4968217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
25, 134
               

               
Conread position:
               
10-336
               

               
Cow position:
               
chr17:20839738-20839419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
103, 7
               

               
Conread position:
               
11-236
               

               
Cow position:
               
chr17:35311244-35311475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
59, 223
               

               
Conread position:
               
12-151
               

               
Cow position:
               
chr17:16117604-16117460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
59, 130
               

               
Conread position:
               
12-168
               

               
Cow position:
               
chr17:3442844-3442689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
12-176
               

               
Cow position:
               
chr17:27667370-27667201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
61, 133
               

               
Conread position:
               
12-194
               

               
Cow position:
               
chr17:31232106-31231925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
60, 72
               

               
Conread position:
               
12-195
               

               
Cow position:
               
chr17:1061238-1061053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
59, 29
               

               
Conread position:
               
12-195
               

               
Cow position:
               
chr17:4436407-4436226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
12-200
               

               
Cow position:
               
chr17:25755608-25755804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
12-242
               

               
Cow position:
               
chr17:5246719-5246948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
174, 106
               

               
Conread position:
               
12-245
               

               
Cow position:
               
chr17:1295747-1295514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
100, 125
               

               
Conread position:
               
12-245
               

               
Cow position:
               
chr17:21031609-21031844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
104, 53
               

               
Conread position:
               
12-251
               

               
Cow position:
               
chr17:19998959-19999200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
59, 131
               

               
Conread position:
               
12-253
               

               
Cow position:
               
chr17:34207996-34207750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
67, 129
               

               
Conread position:
               
12-256
               

               
Cow position:
               
chr17:11362007-11362253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
106, 38
               

               
Conread position:
               
12-259
               

               
Cow position:
               
chr17:24549993-24550248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
27, 137
               

               
Conread position:
               
12-261
               

               
Cow position:
               
chr17:26183046-26183301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
99, 70
               

               
Conread position:
               
12-263
               

               
Cow position:
               
chr17:27765105-27765350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
183, 49
               

               
Conread position:
               
12-271
               

               
Cow position:
               
chr17:11664767-11664502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
67, 52
               

               
Conread position:
               
12-271
               

               
Cow position:
               
chr17:28285204-28284945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
36, 71
               

               
Conread position:
               
12-275
               

               
Cow position:
               
chr17:8690616-8690358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
106, 24
               

               
Conread position:
               
12-284
               

               
Cow position:
               
chr17:32279083-32278810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
70, 126
               

               
Conread position:
               
12-287
               

               
Cow position:
               
chr17:1256680-1256401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
118, 72
               

               
Conread position:
               
12-287
               

               
Cow position:
               
chr17:11381896-11381628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
20, 134
               

               
Conread position:
               
12-287
               

               
Cow position:
               
chr17:20889198-20889470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
56, 108
               

               
Conread position:
               
12-287
               

               
Cow position:
               
chr17:24149001-24149283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
59, 136
               

               
Conread position:
               
12-291
               

               
Cow position:
               
chr17:10446740-10447012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
59, 109
               

               
Conread position:
               
12-291
               

               
Cow position:
               
chr17:12108627-12108907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
39, 132
               

               
Conread position:
               
12-294
               

               
Cow position:
               
chr17:11618404-11618689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
59, 92
               

               
Conread position:
               
12-294
               

               
Cow position:
               
chr17:25541989-25541712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
185, 111
               

               
Conread position:
               
12-294
               

               
Cow position:
               
chr17:32273860-32273582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
12-294
               

               
Cow position:
               
chr17:40331589-40331869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
109, 128
               

               
Conread position:
               
12-294
               

               
Cow position:
               
chr17:43141892-43141604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
101, 50
               

               
Conread position:
               
12-295
               

               
Cow position:
               
chr17:1035777-1035490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
76, 71
               

               
Conread position:
               
12-295
               

               
Cow position:
               
chr17:34595763-34596046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
59, 125
               

               
Conread position:
               
12-295
               

               
Cow position:
               
chr17:38646888-38647167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
187, 62
               

               
Conread position:
               
12-301
               

               
Cow position:
               
chr17:3577362-3577650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
59, 131
               

               
Conread position:
               
12-310
               

               
Cow position:
               
chr17:32027638-32027331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
59, 136
               

               
Conread position:
               
12-331
               

               
Cow position:
               
chr17:11156669-11156355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
59, 133
               

               
Conread position:
               
12-331
               

               
Cow position:
               
chr17:11172791-11172477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
201, 49
               

               
Conread position:
               
12-331
               

               
Cow position:
               
chr17:33052687-33052990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
100, 49
               

               
Conread position:
               
12-345
               

               
Cow position:
               
chr17:40289180-40288847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
29, 141
               

               
Conread position:
               
12-346
               

               
Cow position:
               
chr17:5898701-5898373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
70, 125
               

               
Conread position:
               
12-346
               

               
Cow position:
               
chr17:21680592-21680933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
59, 108
               

               
Conread position:
               
12-346
               

               
Cow position:
               
chr17:38832866-38833197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
81, 130
               

               
Conread position:
               
12-348
               

               
Cow position:
               
chr17:10790136-10790452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
59, 138
               

               
Conread position:
               
12-349
               

               
Cow position:
               
chr17:40771654-40771986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
45, 136
               

               
Conread position:
               
12-350
               

               
Cow position:
               
chr17:6566295-6566634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
102, 57
               

               
Conread position:
               
12-350
               

               
Cow position:
               
chr17:7697877-7698205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
59, 128
               

               
Conread position:
               
12-350
               

               
Cow position:
               
chr17:9117467-9117802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
56, 133
               

               
Conread position:
               
12-350
               

               
Cow position:
               
chr17:9697877-9697524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
59, 18
               

               
Conread position:
               
12-355
               

               
Cow position:
               
chr17:908570-908902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
12-355
               

               
Cow position:
               
chr17:32471970-32471619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
58, 226
               

               
Conread position:
               
12-374
               

               
Cow position:
               
chr17:18109262-18108907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
101, 127
               

               
Conread position:
               
12-374
               

               
Cow position:
               
chr17:26764837-26765204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
57, 130
               

               
Conread position:
               
12-406
               

               
Cow position:
               
chr17:11296459-11296873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
59, 134
               

               
Conread position:
               
12-420
               

               
Cow position:
               
chr17:18490357-18490781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
33, 72
               

               
Conread position:
               
12-420
               

               
Cow position:
               
chr17:37415076-37414674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
59, 225
               

               
Conread position:
               
12-423
               

               
Cow position:
               
chr17:15664493-15664927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
110, 52
               

               
Conread position:
               
12-424
               

               
Cow position:
               
chr17:6423584-6424006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
47, 130
               

               
Conread position:
               
12-425
               

               
Cow position:
               
chr17:15684329-15684756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
44, 114
               

               
Conread position:
               
12-426
               

               
Cow position:
               
chr17:20234051-20234450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
47, 90
               

               
Conread position:
               
12-426
               

               
Cow position:
               
chr17:24077226-24077641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
74, 16
               

               
Conread position:
               
12-426
               

               
Cow position:
               
chr17:38363147-38362759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
184, 13
               

               
Conread position:
               
12-426
               

               
Cow position:
               
chr17:41290194-41289790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
61, 32
               

               
Conread position:
               
13-129
               

               
Cow position:
               
chr17:20337614-20337732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
13-227
               

               
Cow position:
               
chr17:15067801-15067585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
190, 103
               

               
Conread position:
               
13-236
               

               
Cow position:
               
chr17:5896086-5895861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
59, 129
               

               
Conread position:
               
13-244
               

               
Cow position:
               
chr17:40892974-40893207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
87, 58
               

               
Conread position:
               
13-245
               

               
Cow position:
               
chr17:21697557-21697788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
56, 123
               

               
Conread position:
               
13-250
               

               
Cow position:
               
chr17:13143865-13143626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
186, 126
               

               
Conread position:
               
13-254
               

               
Cow position:
               
chr17:36790964-36791202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
138, 48
               

               
Conread position:
               
13-271
               

               
Cow position:
               
chr17:12059266-12059010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
185, 70
               

               
Conread position:
               
13-287
               

               
Cow position:
               
chr17:11278207-11277929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
102, 23
               

               
Conread position:
               
13-287
               

               
Cow position:
               
chr17:36331141-36330859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
56, 18
               

               
Conread position:
               
13-290
               

               
Cow position:
               
chr17:21628307-21628580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
106, 60
               

               
Conread position:
               
13-294
               

               
Cow position:
               
chr17:4225666-4225395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
175, 58
               

               
Conread position:
               
13-294
               

               
Cow position:
               
chr17:38614781-38615065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
99, 126
               

               
Conread position:
               
13-324
               

               
Cow position:
               
chr17:19237022-19237322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
174, 51
               

               
Conread position:
               
13-338
               

               
Cow position:
               
chr17:25901020-25901346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
58, 43
               

               
Conread position:
               
13-340
               

               
Cow position:
               
chr17:9565134-9565448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
109, 129
               

               
Conread position:
               
13-340
               

               
Cow position:
               
chr17:21973308-21972982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
185, 125
               

               
Conread position:
               
13-345
               

               
Cow position:
               
chr17:10459111-10458779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
182, 54
               

               
Conread position:
               
13-345
               

               
Cow position:
               
chr17:20993214-20992890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
105, 51
               

               
Conread position:
               
13-346
               

               
Cow position:
               
chr17:8079142-8079466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
56, 12
               

               
Conread position:
               
13-347
               

               
Cow position:
               
chr17:12590988-12591329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
58, 129
               

               
Conread position:
               
13-347
               

               
Cow position:
               
chr17:20780335-20780671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
58, 74
               

               
Conread position:
               
13-349
               

               
Cow position:
               
chr17:29157243-29157575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
49, 59
               

               
Conread position:
               
13-350
               

               
Cow position:
               
chr17:30718594-30718260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 124
               

               
Conread position:
               
13-364
               

               
Cow position:
               
chr17:25097287-25097625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
46, 129
               

               
Conread position:
               
13-378
               

               
Cow position:
               
chr17:29898473-29898802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
13-387
               

               
Cow position:
               
chr17:7594985-7595342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
58, 23
               

               
Conread position:
               
13-390
               

               
Cow position:
               
chr17:1410418-1410042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
58, 129
               

               
Conread position:
               
13-414
               

               
Cow position:
               
chr17:6996107-6996501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
151, 38
               

               
Conread position:
               
13-423
               

               
Cow position:
               
chr17:11101969-11101567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
258, 60
               

               
Conread position:
               
13-423
               

               
Cow position:
               
chr17:24973776-24974194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
60, 127
               

               
Conread position:
               
13-424
               

               
Cow position:
               
chr17:25815434-25815847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
175, 47
               

               
Conread position:
               
14-240
               

               
Cow position:
               
chr17:966913-966694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
100, 123
               

               
Conread position:
               
14-262
               

               
Cow position:
               
chr17:31231288-31231043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
55, 27
               

               
Conread position:
               
14-283
               

               
Cow position:
               
chr17:15985179-15985445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
206, 12
               

               
Conread position:
               
14-286
               

               
Cow position:
               
chr17:24787195-24786922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
57, 106
               

               
Conread position:
               
14-294
               

               
Cow position:
               
chr17:8837123-8836843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
174, 124
               

               
Conread position:
               
14-346
               

               
Cow position:
               
chr17:22775209-22775532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
158, 60
               

               
Conread position:
               
14-346
               

               
Cow position:
               
chr17:32989318-32989630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
175, 47
               

               
Conread position:
               
14-346
               

               
Cow position:
               
chr17:32993788-32993470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
175, 50
               

               
Conread position:
               
14-414
               

               
Cow position:
               
chr17:20022691-20022272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
88, 126
               

               
Conread position:
               
17-254
               

               
Cow position:
               
chr17:21495203-21495444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
53, 90
               

               
Conread position:
               
17-327
               

               
Cow position:
               
chr17:16448160-16448447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
50, 165
               

               
Conread position:
               
17-340
               

               
Cow position:
               
chr17:20990365-20990042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
179, 121
               

               
Conread position:
               
17-346
               

               
Cow position:
               
chr17:24821695-24822015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
197, 121
               

               
Conread position:
               
17-375
               

               
Cow position:
               
chr17:20932158-20932513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
101, 120
               

               
Conread position:
               
19-261
               

               
Cow position:
               
chr17:44232888-44232639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
51, 122
               

               
Conread position:
               
19-287
               

               
Cow position:
               
chr17:22032863-22032596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
52, 126
               

               
Conread position:
               
19-349
               

               
Cow position:
               
chr17:21755610-21755277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
52, 134
               

               
Conread position:
               
19-423
               

               
Cow position:
               
chr17:15577597-15577988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
185, 25
               

               
Conread position:
               
20-291
               

               
Cow position:
               
chr17:20126445-20126700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
51, 72
               

               
Conread position:
               
20-291
               

               
Cow position:
               
chr17:21918042-21917770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
96, 51
               

               
Conread position:
               
20-347
               

               
Cow position:
               
chr17:24883736-24883418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
38, 73
               

               
Conread position:
               
20-380
               

               
Cow position:
               
chr17:30359310-30359662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
115, 24
               

               
Conread position:
               
20-412
               

               
Cow position:
               
chr17:7142695-7143097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
8, 124
               

               
Conread position:
               
21-280
               

               
Cow position:
               
chr17:20870266-20870006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
44, 90
               

               
Conread position:
               
21-423
               

               
Cow position:
               
chr17:23246043-23246437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
48, 66
               

               
Conread position:
               
22-199
               

               
Cow position:
               
chr17:23337179-23337006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
22-259
               

               
Cow position:
               
chr17:10510828-10510586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
49, 123
               

               
Conread position:
               
23-284
               

               
Cow position:
               
chr17:15450188-15450453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
9, 156
               

               
Conread position:
               
24-346
               

               
Cow position:
               
chr17:17410124-17410447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
13, 35
               

               
Conread position:
               
25-194
               

               
Cow position:
               
chr17:38613083-38613252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
90, 112
               

               
Conread position:
               
26-414
               

               
Cow position:
               
chr17:13244193-13243812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
259, 37
               

               
Conread position:
               
27-216
               

               
Cow position:
               
chr17:37775960-37776149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
65, 44
               

               
Conread position:
               
27-255
               

               
Cow position:
               
chr17:1653850-1653625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
91, 15
               

               
Conread position:
               
27-256
               

               
Cow position:
               
chr17:21298063-21298300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
88, 204
               

               
Conread position:
               
27-347
               

               
Cow position:
               
chr17:4121883-4121575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
174, 111
               

               
Conread position:
               
27-348
               

               
Cow position:
               
chr17:4106147-4105838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
158, 111
               

               
Conread position:
               
27-348
               

               
Cow position:
               
chr17:27058714-27058401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
190, 72
               

               
Conread position:
               
27-354
               

               
Cow position:
               
chr17:979314-979004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
85, 44
               

               
Conread position:
               
27-387
               

               
Cow position:
               
chr17:28359682-28360029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
37, 137
               

               
Conread position:
               
27-412
               

               
Cow position:
               
chr17:25916731-25917126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
37, 119
               

               
Conread position:
               
27-412
               

               
Cow position:
               
chr17:37778778-37778414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
65, 44
               

               
Conread position:
               
27-426
               

               
Cow position:
               
chr17:21959844-21959429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
88, 34
               

               
Conread position:
               
29-249
               

               
Cow position:
               
chr17:13672228-13672011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
29-288
               

               
Cow position:
               
chr17:17683057-17682804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
83, 41
               

               
Conread position:
               
30-219
               

               
Cow position:
               
chr17:40792065-40792252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
170, 107
               

               
Conread position:
               
30-270
               

               
Cow position:
               
chr17:16446590-16446354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
89, 110
               

               
Conread position:
               
31-295
               

               
Cow position:
               
chr17:41811660-41811915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
40, 108
               

               
Conread position:
               
31-425
               

               
Cow position:
               
chr17:18146025-18146443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
53, 111
               

               
Conread position:
               
32-255
               

               
Cow position:
               
chr17:10491367-10491593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
39, 104
               

               
Conread position:
               
34-350
               

               
Cow position:
               
chr17:31037534-31037219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
163, 104
               

               
Conread position:
               
35-423
               

               
Cow position:
               
chr17:30713193-30713597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
29, 106
               

               
Conread position:
               
37-245
               

               
Cow position:
               
chr17:5382137-5381937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
81, 47
               

               
Conread position:
               
44-287
               

               
Cow position:
               
chr17:37342630-37342388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
27, 76
               

               
Conread position:
               
44-393
               

               
Cow position:
               
chr17:20653041-20652708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
27, 93
               

               
Conread position:
               
44-412
               

               
Cow position:
               
chr17:40815883-40815540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
269, 41
               

               
Conread position:
               
48-287
               

               
Cow position:
               
chr17:24928339-24928574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
64, 36
               

               
Conread position:
               
49-414
               

               
Cow position:
               
chr17:4141017-4140675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
63, 115
               

               
Conread position:
               
51-383
               

               
Cow position:
               
chr17:35212229-35212546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
102, 65
               

               
Conread position:
               
55-294
               

               
Cow position:
               
chr17:14060909-14060669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
69, 83
               

               
Conread position:
               
55-421
               

               
Cow position:
               
chr17:5144300-5143923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
37, 89
               

               
Conread position:
               
56-367
               

               
Cow position:
               
chr17:6848673-6848970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
44, 81
               

               
Conread position:
               
64-268
               

               
Cow position:
               
chr17:267712-267505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
48, 81
               

               
Conread position:
               
64-272
               

               
Cow position:
               
chr17:39857269-39857474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
53, 78
               

               
Conread position:
               
64-294
               

               
Cow position:
               
chr17:553081-552865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
54, 19
               

               
Conread position:
               
64-330
               

               
Cow position:
               
chr17:20884399-20884660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
138, 72
               

               
Conread position:
               
66-265
               

               
Cow position:
               
chr17:31481158-31480968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
53, 79
               

               
Conread position:
               
66-295
               

               
Cow position:
               
chr17:26233948-26233724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
152, 50
               

               
Conread position:
               
66-324
               

               
Cow position:
               
chr17:21812267-21812020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
119, 90
               

               
Conread position:
               
66-330
               

               
Cow position:
               
chr17:6328990-6329252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
52, 77
               

               
Conread position:
               
66-350
               

               
Cow position:
               
chr17:32348952-32349226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
142, 50
               

               
Conread position:
               
66-382
               

               
Cow position:
               
chr17:14003699-14004026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
119, 17
               

               
Conread position:
               
66-406
               

               
Cow position:
               
chr17:37138639-37138968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
71, 11
               

               
Conread position:
               
66-423
               

               
Cow position:
               
chr17:7614500-7614145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 69
               

               
Conread position:
               
67-405
               

               
Cow position:
               
chr17:24880627-24880954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
143, 22
               

               
Conread position:
               
67-418
               

               
Cow position:
               
chr17:26162547-26162199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 32
               

               
Conread position:
               
69-417
               

               
Cow position:
               
chr17:18569037-18568721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
136, 47
               

               
Conread position:
               
70-347
               

               
Cow position:
               
chr17:31856545-31856826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
56, 119
               

               
Conread position:
               
71-350
               

               
Cow position:
               
chr17:20874273-20874555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
31, 50
               

               
Conread position:
               
74-249
               

               
Cow position:
               
chr17:25122522-25122347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
44, 105
               

               
Conread position:
               
74-287
               

               
Cow position:
               
chr17:7654566-7654353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
137, 11
               

               
Conread position:
               
74-294
               

               
Cow position:
               
chr17:25501996-25502215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
118, 65
               

               
Conread position:
               
74-346
               

               
Cow position:
               
chr17:4786608-4786335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
229, 25
               

               
Conread position:
               
75-256
               

               
Cow position:
               
chr17:10423970-10424150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
44, 61
               

               
Conread position:
               
75-348
               

               
Cow position:
               
chr17:10308142-10307878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
72, 154
               

               
Conread position:
               
75-422
               

               
Cow position:
               
chr17:10561517-10561865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
47, 30
               

               
Conread position:
               
76-286
               

               
Cow position:
               
chr17:24294303-24294497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
77-406
               

               
Cow position:
               
chr17:1040635-1040962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
138, 64
               

               
Conread position:
               
77-426
               

               
Cow position:
               
chr17:33904029-33903689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
126, 20
               

               
Conread position:
               
79-347
               

               
Cow position:
               
chr17:11832228-11831960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
39, 63
               

               
Conread position:
               
80-355
               

               
Cow position:
               
chr17:21325224-21325494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
11, 62
               

               
Conread position:
               
81-287
               

               
Cow position:
               
chr17:23517049-23516843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
107, 56
               

               
Conread position:
               
81-331
               

               
Cow position:
               
chr17:10432083-10431835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
192, 60
               

               
Conread position:
               
83-426
               

               
Cow position:
               
chr17:6570243-6569913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
42, 64
               

               
Conread position:
               
85-265
               

               
Cow position:
               
chr17:17266997-17266814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
33, 57
               

               
Conread position:
               
86-417
               

               
Cow position:
               
chr17:3353779-3354114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
26, 51
               

               
Conread position:
               
87-424
               

               
Cow position:
               
chr17:15634978-15634653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
36, 116
               

               
Conread position:
               
89-345
               

               
Cow position:
               
chr17:25514222-25513970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
99, 50
               

               
Conread position:
               
89-378
               

               
Cow position:
               
chr17:21373581-21373859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 44
               

               
Conread position:
               
90-294
               

               
Cow position:
               
chr17:7136884-7137084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
22, 52
               

               
Conread position:
               
90-347
               

               
Cow position:
               
chr17:11215327-11215077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
26, 49
               

               
Conread position:
               
90-350
               

               
Cow position:
               
chr17:34751503-34751249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
119, 48
               

               
Conread position:
               
90-387
               

               
Cow position:
               
chr17:11344119-11344404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 51
               

               
Conread position:
               
90-413
               

               
Cow position:
               
chr17:40854771-40855078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
19, 52
               

               
Conread position:
               
92-299
               

               
Cow position:
               
chr17:35339011-35338810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
92-399
               

               
Cow position:
               
chr17:36864535-36864846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
117, 47
               

               
Conread position:
               
93-404
               

               
Cow position:
               
chr17:5787929-5787624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
23, 47
               

               
Conread position:
               
96-349
               

               
Cow position:
               
chr17:21489716-21489469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
22, 46
               

               
Conread position:
               
99-349
               

               
Cow position:
               
chr17:27203133-27202889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
19, 43
               

               
Conread position:
               
99-384
               

               
Cow position:
               
chr17:23798190-23798477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
99, 40
               

               
Conread position:
               
100-294
               

               
Cow position:
               
chr17:25342828-25342636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
15, 42
               

               
Conread position:
               
100-374
               

               
Cow position:
               
chr17:17193407-17193669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
65, 10
               

               
Conread position:
               
100-416
               

               
Cow position:
               
chr17:2275386-2275692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
18, 42
               

               
Conread position:
               
102-426
               

               
Cow position:
               
chr17:27257318-27256983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
101, 122
               

               
Conread position:
               
105-414
               

               
Cow position:
               
chr17:728413-728138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
106-340
               

               
Cow position:
               
chr17:38263568-38263342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
92, 10
               

               
Conread position:
               
107-358
               

               
Cow position:
               
chr17:36275259-36275499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
109-424
               

               
Cow position:
               
chr17:9824590-9824919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
88, 30
               

               
Conread position:
               
110-426
               

               
Cow position:
               
chr17:1469299-1469620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
93, 30
               

               
Conread position:
               
119-418
               

               
Cow position:
               
chr17:5167131-5166851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
90, 57
               

               
Conread position:
               
119-418
               

               
Cow position:
               
chr17:9056768-9056453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
74, 7
               

               
Conread position:
               
119-420
               

               
Cow position:
               
chr17:36400028-36400327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 12
               

               
Conread position:
               
123-417
               

               
Cow position:
               
chr17:16616754-16617045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
225, 21
               

               
Conread position:
               
123-418
               

               
Cow position:
               
chr17:40638885-40639193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
94, 18
               

               
Conread position:
               
125-419
               

               
Cow position:
               
chr17:10886470-10886184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
126-418
               

               
Cow position:
               
chr17:7205350-7205647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
41, 15
               

               
Conread position:
               
132-393
               

               
Cow position:
               
chr17:1455995-1455742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
72, 25
               

               
Conread position:
               
134-345
               

               
Cow position:
               
chr17:37816245-37816042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
141-294
               

               
Cow position:
               
chr17:22245944-22246094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
141-301
               

               
Cow position:
               
chr17:22017135-22016971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
80, 56
               

               
Conread position:
               
141-350
               

               
Cow position:
               
chr17:16158443-16158649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
58, 151
               

               
Conread position:
               
141-362
               

               
Cow position:
               
chr17:22051640-22051421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
72, 56
               

               
Conread position:
               
141-364
               

               
Cow position:
               
chr17:4891408-4891191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
75, 18
               

               
Conread position:
               
141-377
               

               
Cow position:
               
chr17:4085708-4085939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
63, 79
               

               
Conread position:
               
141-411
               

               
Cow position:
               
chr17:13716086-13715815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 87
               

               
Conread position:
               
141-411
               

               
Cow position:
               
chr17:39016047-39016317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
72, 153
               

               
Conread position:
               
141-425
               

               
Cow position:
               
chr17:2270949-2271230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 35
               

               
Conread position:
               
141-426
               

               
Cow position:
               
chr17:25126304-25126598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
190, 86
               

               
Conread position:
               
141-426
               

               
Cow position:
               
chr17:31465299-31465006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 84
               

               
Conread position:
               
142-355
               

               
Cow position:
               
chr17:8293827-8293617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
61, 5
               

               
Conread position:
               
142-413
               

               
Cow position:
               
chr17:5360487-5360231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
15, 82
               

               
Conread position:
               
144-426
               

               
Cow position:
               
chr17:3620115-3619852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
241, 41
               

               
Conread position:
               
145-296
               

               
Cow position:
               
chr17:20810533-20810381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
51, 82
               

               
Conread position:
               
146-348
               

               
Cow position:
               
chr17:5296900-5296702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
57, 87
               

               
Conread position:
               
146-348
               

               
Cow position:
               
chr17:5986115-5985917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
57, 87
               

               
Conread position:
               
148-362
               

               
Cow position:
               
chr17:13601017-13600811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
60, 71
               

               
Conread position:
               
155-350
               

               
Cow position:
               
chr17:28814533-28814334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
43, 80
               

               
Conread position:
               
156-350
               

               
Cow position:
               
chr17:21922666-21922475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
46, 74
               

               
Conread position:
               
161-296
               

               
Cow position:
               
chr17:21604386-21604520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
34, 64
               

               
Conread position:
               
167-426
               

               
Cow position:
               
chr17:38139484-38139743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
38, 62
               

               
Conread position:
               
173-421
               

               
Cow position:
               
chr17:36818019-36818267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
27, 69
               

               
Conread position:
               
176-405
               

               
Cow position:
               
chr17:1328582-1328811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
27, 40
               

               
Conread position:
               
186-414
               

               
Cow position:
               
chr17:13229373-13229600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
19, 45
               

               
Conread position:
               
189-418
               

               
Cow position:
               
chr17:31798445-31798222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
28, 18
               

               
Conread position:
               
191-382
               

               
Cow position:
               
chr17:33913571-33913385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
30, 5
               

               
Conread position:
               
191-383
               

               
Cow position:
               
chr17:10220857-10221039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
152, 12
               

               
Conread position:
               
198-419
               

               
Cow position:
               
chr17:14278073-14278291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 31
               

               
Conread position:
               
200-424
               

               
Cow position:
               
chr17:12342470-12342250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
11, 31
               

               
Conread position:
               
202-401
               

               
Cow position:
               
chr17:18887751-18887568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
202-415
               

               
Cow position:
               
chr17:36173957-36173743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
139, 27
               

               
Conread position:
               
202-417
               

               
Cow position:
               
chr17:7519405-7519610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
202-426
               

               
Cow position:
               
chr17:10769497-10769275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
7, 28
               

               
Conread position:
               
203-422
               

               
Cow position:
               
chr17:10314437-10314652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
182, 26
               

               
Conread position:
               
205-335
               

               
Cow position:
               
chr17:43641081-43640956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
205-380
               

               
Cow position:
               
chr17:3706618-3706451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
205-411
               

               
Cow position:
               
chr17:34870098-34870303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
173, 24
               

               
Conread position:
               
228-417
               

               
Cow position:
               
chr17:18829512-18829703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
67, 44
               

               
Conread position:
               
229-424
               

               
Cow position:
               
chr17:19239838-19239647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
160, 29
               

               
Conread position:
               
231-424
               

               
Cow position:
               
chr17:11655420-11655611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
154, 60
               

               
Conread position:
               
232-422
               

               
Cow position:
               
chr17:8215236-8215419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
171, 57
               

               
Conread position:
               
233-421
               

               
Cow position:
               
chr17:1525779-1525597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
11, 59
               

               
Conread position:
               
233-424
               

               
Cow position:
               
chr17:43284691-43284878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
150, 55
               

               
Conread position:
               
236-424
               

               
Cow position:
               
chr17:12768758-12768578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
173, 22
               

               
Conread position:
               
240-383
               

               
Cow position:
               
chr17:5041354-5041216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
240-416
               

               
Cow position:
               
chr17:33925966-33925792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
143, 53
               

               
Conread position:
               
240-417
               

               
Cow position:
               
chr17:7163843-7163667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
103, 51
               

               
Conread position:
               
249-424
               

               
Cow position:
               
chr17:8093908-8094074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
250-416
               

               
Cow position:
               
chr17:9927420-9927584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
133, 39
               

               
Conread position:
               
281-425
               

               
Cow position:
               
chr17:2700315-2700453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
15, 82
               

               
Conread position:
               
302-426
               

               
Cow position:
               
chr17:3813552-3813426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
83, 0
               
Show alignments to all cow chromosomes.