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Cow genome map

           
Conread name:
           
mE3-MI-P-E3-acw-d-07-1-UM.s1
        

               
Conread position:
               
1-154
               

               
Cow position:
               
chr20:4781378-4781533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
69, 9
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr20:23679330-23679137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
117, 9
               

               
Conread position:
               
1-198
               

               
Cow position:
               
chr20:15582220-15582026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
1-202
               

               
Cow position:
               
chr20:18413670-18413870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
72, 9
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr20:13048602-13048397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
1-206
               

               
Cow position:
               
chr20:15577075-15576867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
55, 9
               

               
Conread position:
               
1-224
               

               
Cow position:
               
chr20:14471733-14471507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
68, 9
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr20:3781610-3781381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
193, 9
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr20:27339882-27340112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
198, 9
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr20:13955857-13956099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
161, 8
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr20:29633175-29632945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
121, 9
               

               
Conread position:
               
1-245
               

               
Cow position:
               
chr20:9379225-9379465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
117, 9
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr20:20312921-20312682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
185, 9
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr20:18491003-18491237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr20:18185395-18185635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
197, 9
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr20:10034112-10033850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
54, 9
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr20:4621523-4621273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
121, 9
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr20:18100235-18100478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
90, 8
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr20:19351952-19351687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr20:20557838-20557578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr20:32578103-32577847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
176, 9
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr20:7550057-7550322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
206, 9
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr20:11864320-11864048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
1-273
               

               
Cow position:
               
chr20:34364851-34365111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
194, 9
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr20:13967442-13967167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
117, 9
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr20:20351173-20350893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
63, 9
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr20:7539411-7539124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
72, 21
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr20:27977894-27977605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
70, 13
               

               
Conread position:
               
1-289
               

               
Cow position:
               
chr20:39019511-39019799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
192, 9
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr20:11482323-11482029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
66, 9
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr20:7806746-7806462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
68, 9
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr20:35009925-35009630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
117, 9
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr20:38123700-38123995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
41, 13
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr20:39325201-39325498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
69, 9
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr20:39517827-39518114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
185, 9
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr20:40177066-40177352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
198, 9
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr20:3607138-3606852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
199, 9
               

               
Conread position:
               
1-331
               

               
Cow position:
               
chr20:26996346-26996670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
68, 9
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr20:15549081-15548749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
67, 9
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr20:12582131-12581799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
187, 9
               

               
Conread position:
               
1-346
               

               
Cow position:
               
chr20:6054697-6054353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
111, 9
               

               
Conread position:
               
1-346
               

               
Cow position:
               
chr20:12996192-12995850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 9
               

               
Conread position:
               
1-346
               

               
Cow position:
               
chr20:21345222-21345589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
81, 9
               

               
Conread position:
               
1-346
               

               
Cow position:
               
chr20:23871000-23870663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
1-346
               

               
Cow position:
               
chr20:34777002-34777336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
111, 9
               

               
Conread position:
               
1-350
               

               
Cow position:
               
chr20:21714568-21714928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
122, 63
               

               
Conread position:
               
1-350
               

               
Cow position:
               
chr20:36207618-36207974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
69, 9
               

               
Conread position:
               
1-350
               

               
Cow position:
               
chr20:38578941-38578604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
193, 9
               

               
Conread position:
               
1-353
               

               
Cow position:
               
chr20:17251524-17251880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
76, 9
               

               
Conread position:
               
1-355
               

               
Cow position:
               
chr20:39398304-39398645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
89, 9
               

               
Conread position:
               
1-357
               

               
Cow position:
               
chr20:7110301-7109955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 9
               

               
Conread position:
               
1-362
               

               
Cow position:
               
chr20:8556458-8556098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
1-365
               

               
Cow position:
               
chr20:23833942-23834289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
1-383
               

               
Cow position:
               
chr20:4204108-4204478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
70, 13
               

               
Conread position:
               
1-387
               

               
Cow position:
               
chr20:22959526-22959150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
110, 9
               

               
Conread position:
               
1-404
               

               
Cow position:
               
chr20:6423780-6424191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 13
               

               
Conread position:
               
1-406
               

               
Cow position:
               
chr20:33532127-33532526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
111, 9
               

               
Conread position:
               
1-412
               

               
Cow position:
               
chr20:7659398-7658983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
197, 13
               

               
Conread position:
               
1-412
               

               
Cow position:
               
chr20:18618454-18618840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
349, 9
               

               
Conread position:
               
1-413
               

               
Cow position:
               
chr20:17669998-17670403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 8
               

               
Conread position:
               
1-413
               

               
Cow position:
               
chr20:33435353-33434916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
27, 9
               

               
Conread position:
               
1-415
               

               
Cow position:
               
chr20:220432-220835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 9
               

               
Conread position:
               
1-415
               

               
Cow position:
               
chr20:13465334-13465732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 9
               

               
Conread position:
               
1-417
               

               
Cow position:
               
chr20:14679434-14679845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 9
               

               
Conread position:
               
1-419
               

               
Cow position:
               
chr20:19265973-19266377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr20:10838405-10837984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 8
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr20:15074016-15073600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 9
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chr20:7442308-7441891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
294, 72
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chr20:25686536-25686115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 8
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr20:4205779-4206206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr20:8703091-8702678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
187, 9
               

               
Conread position:
               
1-423
               

               
Cow position:
               
chr20:26881098-26880668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
72, 9
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr20:11741488-11741060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
2-197
               

               
Cow position:
               
chr20:8020711-8020908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
80, 8
               

               
Conread position:
               
2-401
               

               
Cow position:
               
chr20:27001210-27001595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
42, 8
               

               
Conread position:
               
2-417
               

               
Cow position:
               
chr20:24869212-24868791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 118
               

               
Conread position:
               
2-422
               

               
Cow position:
               
chr20:25274462-25274061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
40, 8
               

               
Conread position:
               
3-185
               

               
Cow position:
               
chr20:35760488-35760668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
89, 70
               

               
Conread position:
               
3-187
               

               
Cow position:
               
chr20:17363875-17363686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
3-217
               

               
Cow position:
               
chr20:38028189-38027982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
64, 7
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr20:21324944-21325146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
3-239
               

               
Cow position:
               
chr20:14831794-14831559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
191, 7
               

               
Conread position:
               
3-240
               

               
Cow position:
               
chr20:37200170-37200410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
74, 49
               

               
Conread position:
               
3-251
               

               
Cow position:
               
chr20:24521568-24521814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
109, 139
               

               
Conread position:
               
3-256
               

               
Cow position:
               
chr20:5104618-5104380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
116, 63
               

               
Conread position:
               
3-263
               

               
Cow position:
               
chr20:9536951-9537216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
109, 141
               

               
Conread position:
               
3-283
               

               
Cow position:
               
chr20:15148195-15147918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
145, 113
               

               
Conread position:
               
3-291
               

               
Cow position:
               
chr20:5998847-5998566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
213, 68
               

               
Conread position:
               
3-302
               

               
Cow position:
               
chr20:20203033-20203334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
192, 133
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr20:29308687-29308354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
83, 7
               

               
Conread position:
               
3-355
               

               
Cow position:
               
chr20:31746808-31746471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
3-382
               

               
Cow position:
               
chr20:14879604-14879996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
61, 119
               

               
Conread position:
               
3-401
               

               
Cow position:
               
chr20:10759647-10759264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 7
               

               
Conread position:
               
3-405
               

               
Cow position:
               
chr20:19363545-19363152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
84, 45
               

               
Conread position:
               
3-422
               

               
Cow position:
               
chr20:14512865-14513261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
242, 84
               

               
Conread position:
               
3-425
               

               
Cow position:
               
chr20:10208619-10209062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
68, 139
               

               
Conread position:
               
3-426
               

               
Cow position:
               
chr20:7756812-7756381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
144, 116
               

               
Conread position:
               
3-426
               

               
Cow position:
               
chr20:35145826-35146270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
70, 237
               

               
Conread position:
               
4-220
               

               
Cow position:
               
chr20:22445817-22445604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
4-225
               

               
Cow position:
               
chr20:9988405-9988620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
210, 165
               

               
Conread position:
               
4-269
               

               
Cow position:
               
chr20:30777994-30778252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
117, 65
               

               
Conread position:
               
4-286
               

               
Cow position:
               
chr20:38873194-38872901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
91, 80
               

               
Conread position:
               
4-295
               

               
Cow position:
               
chr20:28296108-28296403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
58, 139
               

               
Conread position:
               
4-311
               

               
Cow position:
               
chr20:6258246-6257937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
67, 138
               

               
Conread position:
               
4-347
               

               
Cow position:
               
chr20:26076902-26077239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 131
               

               
Conread position:
               
4-348
               

               
Cow position:
               
chr20:7182858-7182529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
69, 154
               

               
Conread position:
               
4-414
               

               
Cow position:
               
chr20:9707080-9706693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 134
               

               
Conread position:
               
4-420
               

               
Cow position:
               
chr20:20359959-20359552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 69
               

               
Conread position:
               
4-426
               

               
Cow position:
               
chr20:35843294-35842891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 101
               

               
Conread position:
               
7-275
               

               
Cow position:
               
chr20:6571153-6571425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
189, 54
               

               
Conread position:
               
7-383
               

               
Cow position:
               
chr20:18530269-18530627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 118
               

               
Conread position:
               
12-187
               

               
Cow position:
               
chr20:33170049-33169872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
12-197
               

               
Cow position:
               
chr20:18399586-18399773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
100, 180
               

               
Conread position:
               
12-207
               

               
Cow position:
               
chr20:614491-614687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
121, 68
               

               
Conread position:
               
12-225
               

               
Cow position:
               
chr20:26679948-26680164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
59, 133
               

               
Conread position:
               
12-241
               

               
Cow position:
               
chr20:26469239-26469009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
71, 129
               

               
Conread position:
               
12-256
               

               
Cow position:
               
chr20:17903986-17904229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
175, 124
               

               
Conread position:
               
12-257
               

               
Cow position:
               
chr20:15761122-15760878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
78, 130
               

               
Conread position:
               
12-257
               

               
Cow position:
               
chr20:19313239-19312994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
55, 104
               

               
Conread position:
               
12-268
               

               
Cow position:
               
chr20:19146696-19146959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
59, 134
               

               
Conread position:
               
12-268
               

               
Cow position:
               
chr20:30817363-30817618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
181, 61
               

               
Conread position:
               
12-270
               

               
Cow position:
               
chr20:9473788-9473530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
102, 59
               

               
Conread position:
               
12-271
               

               
Cow position:
               
chr20:13269449-13269705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
59, 130
               

               
Conread position:
               
12-272
               

               
Cow position:
               
chr20:11923413-11923162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
103, 27
               

               
Conread position:
               
12-281
               

               
Cow position:
               
chr20:35958471-35958743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
99, 125
               

               
Conread position:
               
12-283
               

               
Cow position:
               
chr20:13821760-13821481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
57, 224
               

               
Conread position:
               
12-287
               

               
Cow position:
               
chr20:6501625-6501895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
56, 76
               

               
Conread position:
               
12-287
               

               
Cow position:
               
chr20:9014522-9014246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
59, 108
               

               
Conread position:
               
12-294
               

               
Cow position:
               
chr20:14806712-14806994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 126
               

               
Conread position:
               
12-294
               

               
Cow position:
               
chr20:23065003-23064728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
186, 114
               

               
Conread position:
               
12-294
               

               
Cow position:
               
chr20:40127510-40127236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
101, 71
               

               
Conread position:
               
12-307
               

               
Cow position:
               
chr20:19238606-19238306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
59, 115
               

               
Conread position:
               
12-318
               

               
Cow position:
               
chr20:23846846-23846536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
67, 131
               

               
Conread position:
               
12-324
               

               
Cow position:
               
chr20:5576592-5576909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
58, 71
               

               
Conread position:
               
12-331
               

               
Cow position:
               
chr20:33363346-33363659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
177, 49
               

               
Conread position:
               
12-340
               

               
Cow position:
               
chr20:20983833-20984142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
12-341
               

               
Cow position:
               
chr20:35907221-35906899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
99, 71
               

               
Conread position:
               
12-345
               

               
Cow position:
               
chr20:12420795-12420464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
59, 123
               

               
Conread position:
               
12-346
               

               
Cow position:
               
chr20:581095-580764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
184, 107
               

               
Conread position:
               
12-346
               

               
Cow position:
               
chr20:19751135-19751463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
61, 87
               

               
Conread position:
               
12-346
               

               
Cow position:
               
chr20:42459026-42458700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
52, 39
               

               
Conread position:
               
12-347
               

               
Cow position:
               
chr20:28982523-28982857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
52, 131
               

               
Conread position:
               
12-347
               

               
Cow position:
               
chr20:38768627-38768306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
12-349
               

               
Cow position:
               
chr20:39728274-39728609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
110, 128
               

               
Conread position:
               
12-350
               

               
Cow position:
               
chr20:22064896-22065226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
58, 75
               

               
Conread position:
               
12-355
               

               
Cow position:
               
chr20:5826763-5827104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
58, 133
               

               
Conread position:
               
12-359
               

               
Cow position:
               
chr20:13752066-13752394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
248, 124
               

               
Conread position:
               
12-367
               

               
Cow position:
               
chr20:40781794-40782137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
18, 77
               

               
Conread position:
               
12-380
               

               
Cow position:
               
chr20:9433424-9433790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
100, 40
               

               
Conread position:
               
12-380
               

               
Cow position:
               
chr20:34107942-34108297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
330, 19
               

               
Conread position:
               
12-380
               

               
Cow position:
               
chr20:40511932-40511564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 105
               

               
Conread position:
               
12-395
               

               
Cow position:
               
chr20:32667815-32668175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
44, 109
               

               
Conread position:
               
12-406
               

               
Cow position:
               
chr20:6903153-6903530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 93
               

               
Conread position:
               
12-416
               

               
Cow position:
               
chr20:3599564-3599156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
203, 129
               

               
Conread position:
               
12-416
               

               
Cow position:
               
chr20:14572530-14572130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 76
               

               
Conread position:
               
12-416
               

               
Cow position:
               
chr20:21372142-21372542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
179, 73
               

               
Conread position:
               
12-416
               

               
Cow position:
               
chr20:29805835-29805431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
75, 5
               

               
Conread position:
               
12-424
               

               
Cow position:
               
chr20:38817836-38818243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
191, 49
               

               
Conread position:
               
13-197
               

               
Cow position:
               
chr20:12334209-12334386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
104, 51
               

               
Conread position:
               
13-241
               

               
Cow position:
               
chr20:24391807-24392034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
58, 102
               

               
Conread position:
               
13-262
               

               
Cow position:
               
chr20:13876881-13876626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
58, 92
               

               
Conread position:
               
13-277
               

               
Cow position:
               
chr20:14735503-14735760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
13-287
               

               
Cow position:
               
chr20:7439022-7438750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
186, 30
               

               
Conread position:
               
13-291
               

               
Cow position:
               
chr20:19328226-19328493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
99, 88
               

               
Conread position:
               
13-291
               

               
Cow position:
               
chr20:35797432-35797714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
56, 93
               

               
Conread position:
               
13-293
               

               
Cow position:
               
chr20:8578071-8578356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
58, 130
               

               
Conread position:
               
13-294
               

               
Cow position:
               
chr20:11542456-11542181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
47, 55
               

               
Conread position:
               
13-294
               

               
Cow position:
               
chr20:12441865-12441590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
58, 129
               

               
Conread position:
               
13-310
               

               
Cow position:
               
chr20:6890532-6890838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
35, 140
               

               
Conread position:
               
13-317
               

               
Cow position:
               
chr20:37165553-37165837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
170, 125
               

               
Conread position:
               
13-324
               

               
Cow position:
               
chr20:35897345-35897656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
199, 191
               

               
Conread position:
               
13-338
               

               
Cow position:
               
chr20:16935476-16935167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
57, 127
               

               
Conread position:
               
13-346
               

               
Cow position:
               
chr20:9412319-9412644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
167, 75
               

               
Conread position:
               
13-349
               

               
Cow position:
               
chr20:33144728-33144392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
100, 131
               

               
Conread position:
               
13-350
               

               
Cow position:
               
chr20:6602868-6603200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 54
               

               
Conread position:
               
13-361
               

               
Cow position:
               
chr20:28067599-28067250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
175, 125
               

               
Conread position:
               
13-415
               

               
Cow position:
               
chr20:8429568-8429987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
54, 140
               

               
Conread position:
               
13-417
               

               
Cow position:
               
chr20:40256797-40257197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
105, 35
               

               
Conread position:
               
13-418
               

               
Cow position:
               
chr20:27408051-27407647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
58, 127
               

               
Conread position:
               
13-423
               

               
Cow position:
               
chr20:21019392-21019811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
132, 43
               

               
Conread position:
               
13-423
               

               
Cow position:
               
chr20:23164043-23163671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
330, 92
               

               
Conread position:
               
13-424
               

               
Cow position:
               
chr20:41110281-41109862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
100, 220
               

               
Conread position:
               
13-426
               

               
Cow position:
               
chr20:22235142-22235555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
170, 125
               

               
Conread position:
               
14-284
               

               
Cow position:
               
chr20:22920332-22920069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
108, 41
               

               
Conread position:
               
14-294
               

               
Cow position:
               
chr20:31927630-31927355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
57, 105
               

               
Conread position:
               
14-355
               

               
Cow position:
               
chr20:29844883-29845216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 68
               

               
Conread position:
               
14-411
               

               
Cow position:
               
chr20:24069638-24070043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
174, 47
               

               
Conread position:
               
17-252
               

               
Cow position:
               
chr20:28831794-28832037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
31, 130
               

               
Conread position:
               
17-253
               

               
Cow position:
               
chr20:15235596-15235828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
52, 131
               

               
Conread position:
               
17-291
               

               
Cow position:
               
chr20:21928735-21929010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
101, 124
               

               
Conread position:
               
17-347
               

               
Cow position:
               
chr20:18320964-18320637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
52, 128
               

               
Conread position:
               
17-350
               

               
Cow position:
               
chr20:3321307-3320982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
324, 71
               

               
Conread position:
               
17-362
               

               
Cow position:
               
chr20:32862161-32861829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 11
               

               
Conread position:
               
17-379
               

               
Cow position:
               
chr20:11550197-11550552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
21, 73
               

               
Conread position:
               
17-420
               

               
Cow position:
               
chr20:14759833-14759423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
51, 76
               

               
Conread position:
               
18-287
               

               
Cow position:
               
chr20:7210870-7211141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
54, 7
               

               
Conread position:
               
19-268
               

               
Cow position:
               
chr20:22704121-22704377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
52, 126
               

               
Conread position:
               
19-283
               

               
Cow position:
               
chr20:13994642-13994899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
48, 130
               

               
Conread position:
               
19-345
               

               
Cow position:
               
chr20:15565998-15565674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
52, 213
               

               
Conread position:
               
19-380
               

               
Cow position:
               
chr20:34001563-34001209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
74, 126
               

               
Conread position:
               
19-420
               

               
Cow position:
               
chr20:5814401-5814815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
9, 126
               

               
Conread position:
               
20-353
               

               
Cow position:
               
chr20:34098124-34097790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
136, 116
               

               
Conread position:
               
21-413
               

               
Cow position:
               
chr20:39405593-39405984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 145
               

               
Conread position:
               
22-347
               

               
Cow position:
               
chr20:13652521-13652210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
193, 42
               

               
Conread position:
               
23-294
               

               
Cow position:
               
chr20:271586-271316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
89, 60
               

               
Conread position:
               
27-200
               

               
Cow position:
               
chr20:18837320-18837143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
44, 116
               

               
Conread position:
               
27-226
               

               
Cow position:
               
chr20:9701734-9701527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
95, 17
               

               
Conread position:
               
27-271
               

               
Cow position:
               
chr20:283088-282840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
34, 93
               

               
Conread position:
               
27-294
               

               
Cow position:
               
chr20:34918120-34918378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
90, 34
               

               
Conread position:
               
27-346
               

               
Cow position:
               
chr20:10200188-10200502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
86, 112
               

               
Conread position:
               
27-421
               

               
Cow position:
               
chr20:25823119-25823509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 167
               

               
Conread position:
               
27-423
               

               
Cow position:
               
chr20:746790-747185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
85, 37
               

               
Conread position:
               
29-245
               

               
Cow position:
               
chr20:37272555-37272774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
35, 56
               

               
Conread position:
               
29-291
               

               
Cow position:
               
chr20:39415583-39415855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
42, 117
               

               
Conread position:
               
29-318
               

               
Cow position:
               
chr20:32988989-32988697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
121, 32
               

               
Conread position:
               
29-350
               

               
Cow position:
               
chr20:20241943-20242249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
246, 97
               

               
Conread position:
               
29-414
               

               
Cow position:
               
chr20:15312502-15312895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
42, 111
               

               
Conread position:
               
30-328
               

               
Cow position:
               
chr20:20471631-20471921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 96
               

               
Conread position:
               
30-380
               

               
Cow position:
               
chr20:31080887-31081229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 33
               

               
Conread position:
               
31-303
               

               
Cow position:
               
chr20:7803303-7803051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
31-346
               

               
Cow position:
               
chr20:5636325-5636637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
38, 114
               

               
Conread position:
               
32-285
               

               
Cow position:
               
chr20:21761622-21761874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
80, 109
               

               
Conread position:
               
32-298
               

               
Cow position:
               
chr20:24727220-24727475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
184, 29
               

               
Conread position:
               
33-340
               

               
Cow position:
               
chr20:13025761-13025460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
83, 18
               

               
Conread position:
               
33-423
               

               
Cow position:
               
chr20:1575946-1576327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 106
               

               
Conread position:
               
34-287
               

               
Cow position:
               
chr20:14433580-14433320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
79, 109
               

               
Conread position:
               
36-294
               

               
Cow position:
               
chr20:36010639-36010903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
31, 112
               

               
Conread position:
               
37-291
               

               
Cow position:
               
chr20:23792458-23792709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
34, 103
               

               
Conread position:
               
37-416
               

               
Cow position:
               
chr20:8261758-8262141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 83
               

               
Conread position:
               
38-345
               

               
Cow position:
               
chr20:6096639-6096340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
253, 50
               

               
Conread position:
               
39-415
               

               
Cow position:
               
chr20:4334667-4334293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
157, 44
               

               
Conread position:
               
41-333
               

               
Cow position:
               
chr20:17474932-17474641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
105, 65
               

               
Conread position:
               
41-423
               

               
Cow position:
               
chr20:14540207-14540576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 75
               

               
Conread position:
               
43-350
               

               
Cow position:
               
chr20:9267244-9266947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
28, 44
               

               
Conread position:
               
44-384
               

               
Cow position:
               
chr20:30648347-30648007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 19
               

               
Conread position:
               
45-414
               

               
Cow position:
               
chr20:24234019-24234369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
44, 91
               

               
Conread position:
               
46-411
               

               
Cow position:
               
chr20:38858548-38858213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 34
               

               
Conread position:
               
48-207
               

               
Cow position:
               
chr20:6045559-6045411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
55-293
               

               
Cow position:
               
chr20:34597230-34596990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
133, 30
               

               
Conread position:
               
55-294
               

               
Cow position:
               
chr20:8098150-8098393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
8, 90
               

               
Conread position:
               
55-294
               

               
Cow position:
               
chr20:23643265-23643030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
58, 19
               

               
Conread position:
               
55-340
               

               
Cow position:
               
chr20:22484729-22485009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
63, 89
               

               
Conread position:
               
55-423
               

               
Cow position:
               
chr20:311212-311556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
296, 75
               

               
Conread position:
               
56-207
               

               
Cow position:
               
chr20:11355088-11355237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
58-307
               

               
Cow position:
               
chr20:7623186-7622942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
149, 30
               

               
Conread position:
               
58-328
               

               
Cow position:
               
chr20:28955827-28955563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
65, 25
               

               
Conread position:
               
58-426
               

               
Cow position:
               
chr20:2298905-2298541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
100, 80
               

               
Conread position:
               
60-284
               

               
Cow position:
               
chr20:13658968-13658744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
138, 78
               

               
Conread position:
               
61-359
               

               
Cow position:
               
chr20:4332013-4332302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
69, 41
               

               
Conread position:
               
66-383
               

               
Cow position:
               
chr20:40691937-40692255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
53, 10
               

               
Conread position:
               
66-413
               

               
Cow position:
               
chr20:34221360-34221725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
52, 69
               

               
Conread position:
               
67-299
               

               
Cow position:
               
chr20:35407744-35407964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
67-331
               

               
Cow position:
               
chr20:25162247-25161984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
129, 67
               

               
Conread position:
               
67-346
               

               
Cow position:
               
chr20:7362850-7363118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
129, 71
               

               
Conread position:
               
67-346
               

               
Cow position:
               
chr20:22978203-22978483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
64, 7
               

               
Conread position:
               
67-350
               

               
Cow position:
               
chr20:30710765-30710475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
51, 71
               

               
Conread position:
               
67-362
               

               
Cow position:
               
chr20:24833975-24834261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
146, 74
               

               
Conread position:
               
67-413
               

               
Cow position:
               
chr20:15569065-15568720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
51, 70
               

               
Conread position:
               
67-418
               

               
Cow position:
               
chr20:8307898-8308252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
71, 164
               

               
Conread position:
               
68-345
               

               
Cow position:
               
chr20:36633699-36633967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
44, 73
               

               
Conread position:
               
68-416
               

               
Cow position:
               
chr20:23234917-23235258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 131
               

               
Conread position:
               
69-286
               

               
Cow position:
               
chr20:6240638-6240420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
129, 72
               

               
Conread position:
               
69-351
               

               
Cow position:
               
chr20:8546949-8547228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
119, 69
               

               
Conread position:
               
69-361
               

               
Cow position:
               
chr20:13494396-13494680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
114, 5
               

               
Conread position:
               
70-287
               

               
Cow position:
               
chr20:13794873-13795082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
71-350
               

               
Cow position:
               
chr20:20099708-20099439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
47, 12
               

               
Conread position:
               
74-341
               

               
Cow position:
               
chr20:39267071-39266807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
74, 67
               

               
Conread position:
               
74-348
               

               
Cow position:
               
chr20:19339985-19339723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
75-417
               

               
Cow position:
               
chr20:37028709-37029050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
23, 14
               

               
Conread position:
               
77-295
               

               
Cow position:
               
chr20:12430903-12430691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
127, 13
               

               
Conread position:
               
77-343
               

               
Cow position:
               
chr20:12676335-12676582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
16, 6
               

               
Conread position:
               
80-300
               

               
Cow position:
               
chr20:29404282-29404062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
120, 61
               

               
Conread position:
               
85-287
               

               
Cow position:
               
chr20:34084967-34085169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
27, 9
               

               
Conread position:
               
85-425
               

               
Cow position:
               
chr20:24711734-24712095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
31, 52
               

               
Conread position:
               
90-281
               

               
Cow position:
               
chr20:21698291-21698489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
32, 52
               

               
Conread position:
               
90-286
               

               
Cow position:
               
chr20:23103124-23103323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
108, 51
               

               
Conread position:
               
90-286
               

               
Cow position:
               
chr20:28804467-28804670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
88, 26
               

               
Conread position:
               
90-321
               

               
Cow position:
               
chr20:24000895-24000665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
28, 53
               

               
Conread position:
               
90-346
               

               
Cow position:
               
chr20:7738322-7738075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
124, 54
               

               
Conread position:
               
90-375
               

               
Cow position:
               
chr20:18379286-18379559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
98, 49
               

               
Conread position:
               
90-424
               

               
Cow position:
               
chr20:22265341-22265009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
124, 51
               

               
Conread position:
               
91-294
               

               
Cow position:
               
chr20:15822457-15822656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
49, 35
               

               
Conread position:
               
92-279
               

               
Cow position:
               
chr20:34901475-34901665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
111, 49
               

               
Conread position:
               
92-417
               

               
Cow position:
               
chr20:21236586-21236877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
95-287
               

               
Cow position:
               
chr20:19616395-19616593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
21, 47
               

               
Conread position:
               
95-330
               

               
Cow position:
               
chr20:16509403-16509638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
72, 21
               

               
Conread position:
               
100-344
               

               
Cow position:
               
chr20:41883650-41883884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
92, 18
               

               
Conread position:
               
100-346
               

               
Cow position:
               
chr20:18392347-18392115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
12, 42
               

               
Conread position:
               
100-381
               

               
Cow position:
               
chr20:28594197-28594476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
101, 41
               

               
Conread position:
               
101-413
               

               
Cow position:
               
chr20:5644702-5645019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
97, 40
               

               
Conread position:
               
101-417
               

               
Cow position:
               
chr20:36741391-36741709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
97, 38
               

               
Conread position:
               
101-424
               

               
Cow position:
               
chr20:1206018-1205706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 130
               

               
Conread position:
               
106-347
               

               
Cow position:
               
chr20:16548356-16548121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
104, 10
               

               
Conread position:
               
110-346
               

               
Cow position:
               
chr20:5078548-5078783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
85, 31
               

               
Conread position:
               
111-256
               

               
Cow position:
               
chr20:37357532-37357678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
88, 25
               

               
Conread position:
               
111-291
               

               
Cow position:
               
chr20:17765404-17765226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
111-413
               

               
Cow position:
               
chr20:35192702-35193002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
7, 31
               

               
Conread position:
               
112-383
               

               
Cow position:
               
chr20:16491997-16492266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
7, 30
               

               
Conread position:
               
123-350
               

               
Cow position:
               
chr20:20056547-20056326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
75, 21
               

               
Conread position:
               
124-299
               

               
Cow position:
               
chr20:38514720-38514892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
90, 15
               

               
Conread position:
               
129-346
               

               
Cow position:
               
chr20:10772147-10772363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
70, 12
               

               
Conread position:
               
133-349
               

               
Cow position:
               
chr20:11359684-11359474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
19, 75
               

               
Conread position:
               
139-416
               

               
Cow position:
               
chr20:30855801-30855532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
64, 90
               

               
Conread position:
               
140-294
               

               
Cow position:
               
chr20:38089865-38090020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
59, 90
               

               
Conread position:
               
140-346
               

               
Cow position:
               
chr20:16941335-16941132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
60, 16
               

               
Conread position:
               
141-329
               

               
Cow position:
               
chr20:23506515-23506330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
73, 92
               

               
Conread position:
               
141-404
               

               
Cow position:
               
chr20:17397302-17397049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
68, 18
               

               
Conread position:
               
141-415
               

               
Cow position:
               
chr20:7100731-7101012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
62, 48
               

               
Conread position:
               
141-415
               

               
Cow position:
               
chr20:24644192-24643923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
55, 90
               

               
Conread position:
               
141-422
               

               
Cow position:
               
chr20:9376423-9376714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
57, 86
               

               
Conread position:
               
145-381
               

               
Cow position:
               
chr20:42254817-42255049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
9, 89
               

               
Conread position:
               
146-373
               

               
Cow position:
               
chr20:19865213-19865430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
62, 77
               

               
Conread position:
               
147-415
               

               
Cow position:
               
chr20:4934100-4933844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
61, 26
               

               
Conread position:
               
147-417
               

               
Cow position:
               
chr20:21428120-21428405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
51, 80
               

               
Conread position:
               
148-340
               

               
Cow position:
               
chr20:40157862-40158050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
50, 80
               

               
Conread position:
               
150-399
               

               
Cow position:
               
chr20:39656213-39656450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
53, 82
               

               
Conread position:
               
151-415
               

               
Cow position:
               
chr20:24849772-24850026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
152-418
               

               
Cow position:
               
chr20:26750241-26749985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
51, 63
               

               
Conread position:
               
158-378
               

               
Cow position:
               
chr20:14363166-14362960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
55, 71
               

               
Conread position:
               
165-413
               

               
Cow position:
               
chr20:5763318-5763070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
33, 57
               

               
Conread position:
               
182-414
               

               
Cow position:
               
chr20:39220723-39220499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
23, 45
               

               
Conread position:
               
193-412
               

               
Cow position:
               
chr20:35924773-35924564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
16, 40
               

               
Conread position:
               
195-423
               

               
Cow position:
               
chr20:4157433-4157650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
161, 17
               

               
Conread position:
               
202-414
               

               
Cow position:
               
chr20:13609047-13608845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
202-423
               

               
Cow position:
               
chr20:15241747-15241530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
141, 30
               

               
Conread position:
               
205-424
               

               
Cow position:
               
chr20:17363635-17363423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
176, 24
               

               
Conread position:
               
206-406
               

               
Cow position:
               
chr20:16979770-16979966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
179, 18
               

               
Conread position:
               
210-419
               

               
Cow position:
               
chr20:25146808-25147008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
220-412
               

               
Cow position:
               
chr20:2430579-2430763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
165, 9
               

               
Conread position:
               
227-426
               

               
Cow position:
               
chr20:32972592-32972783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
167, 62
               

               
Conread position:
               
232-411
               

               
Cow position:
               
chr20:6053422-6053252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
232-426
               

               
Cow position:
               
chr20:2487191-2487382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
110, 34
               

               
Conread position:
               
236-419
               

               
Cow position:
               
chr20:39285010-39285192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
145, 69
               

               
Conread position:
               
240-418
               

               
Cow position:
               
chr20:21518703-21518873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
243-391
               

               
Cow position:
               
chr20:39418826-39418687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
244-423
               

               
Cow position:
               
chr20:6105095-6104918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
149, 49
               

               
Conread position:
               
246-425
               

               
Cow position:
               
chr20:8445088-8444912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
96, 45
               

               
Conread position:
               
259-425
               

               
Cow position:
               
chr20:39669018-39669179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
118, 30
               

               
Conread position:
               
259-426
               

               
Cow position:
               
chr20:29521156-29520997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
122, 32
               

               
Conread position:
               
261-418
               

               
Cow position:
               
chr20:37136161-37136316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
124, 28
               

               
Conread position:
               
262-417
               

               
Cow position:
               
chr20:6571691-6571837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
264-382
               

               
Cow position:
               
chr20:21698830-21698945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
7, 30
               

               
Conread position:
               
296-423
               

               
Cow position:
               
chr20:32975307-32975431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
9, 48
               

               
Conread position:
               
296-424
               

               
Cow position:
               
chr20:2801761-2801632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
85, 0
               
Show alignments to all cow chromosomes.