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Cow genome map

           
Conread name:
           
mE3-MI-P-E3-acw-d-07-1-UM.s1
        

               
Conread position:
               
1-176
               

               
Cow position:
               
chr21:23683387-23683558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
43, 9
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr21:42145754-42145944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
70, 13
               

               
Conread position:
               
1-202
               

               
Cow position:
               
chr21:5425817-5426009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
150, 9
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr21:28944527-28944325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr21:37361631-37361435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
111, 9
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr21:31676335-31676544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
117, 9
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr21:28443541-28443326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr21:29942844-29943056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr21:21480346-21480112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
68, 9
               

               
Conread position:
               
1-245
               

               
Cow position:
               
chr21:27743579-27743829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
72, 9
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr21:8985386-8985634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
117, 9
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr21:49662280-49662038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
197, 13
               

               
Conread position:
               
1-252
               

               
Cow position:
               
chr21:3236367-3236613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
187, 9
               

               
Conread position:
               
1-252
               

               
Cow position:
               
chr21:16612466-16612712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
188, 9
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr21:37282146-37282393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
200, 9
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr21:13738405-13738658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
61, 9
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr21:17674399-17674134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr21:45850874-45850603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
195, 13
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr21:19363627-19363356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
83, 9
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr21:28881979-28882244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
110, 9
               

               
Conread position:
               
1-281
               

               
Cow position:
               
chr21:5153454-5153737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
131, 13
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr21:28734075-28733792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
198, 9
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr21:28998069-28997781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr21:36163126-36162838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
111, 9
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr21:1483326-1483602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
64, 9
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr21:3498335-3498615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
105, 9
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr21:5636884-5636598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
63, 19
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr21:8618111-8618386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
138, 9
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr21:18289499-18289785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr21:33729271-33729552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
127, 9
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr21:41620956-41621247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
57, 9
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr21:24887845-24888125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
68, 9
               

               
Conread position:
               
1-293
               

               
Cow position:
               
chr21:28190865-28191160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
67, 9
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr21:7564485-7564179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr21:28512369-28512642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr21:29002325-29002025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
68, 9
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr21:33210035-33210316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr21:36297315-36297621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
43, 9
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr21:34141350-34141055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
47, 15
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr21:42540383-42540088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
57, 9
               

               
Conread position:
               
1-301
               

               
Cow position:
               
chr21:18828473-18828168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
1-309
               

               
Cow position:
               
chr21:725055-724744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
86, 9
               

               
Conread position:
               
1-318
               

               
Cow position:
               
chr21:18842401-18842088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
1-318
               

               
Cow position:
               
chr21:35061925-35062231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
1-333
               

               
Cow position:
               
chr21:37845911-37845599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
1-339
               

               
Cow position:
               
chr21:31253373-31253703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
35, 9
               

               
Conread position:
               
1-346
               

               
Cow position:
               
chr21:395712-396044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
208, 9
               

               
Conread position:
               
1-346
               

               
Cow position:
               
chr21:3818053-3818385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
113, 9
               

               
Conread position:
               
1-346
               

               
Cow position:
               
chr21:10000917-10001252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
113, 9
               

               
Conread position:
               
1-346
               

               
Cow position:
               
chr21:15976478-15976809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
123, 9
               

               
Conread position:
               
1-346
               

               
Cow position:
               
chr21:21169658-21169319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
59, 9
               

               
Conread position:
               
1-346
               

               
Cow position:
               
chr21:29069492-29069149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 9
               

               
Conread position:
               
1-346
               

               
Cow position:
               
chr21:33350579-33350918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
60, 9
               

               
Conread position:
               
1-346
               

               
Cow position:
               
chr21:42053428-42053103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
120, 9
               

               
Conread position:
               
1-346
               

               
Cow position:
               
chr21:44251989-44251666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
201, 9
               

               
Conread position:
               
1-346
               

               
Cow position:
               
chr21:45473920-45473581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
124, 9
               

               
Conread position:
               
1-347
               

               
Cow position:
               
chr21:33263686-33264021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
209, 45
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr21:9416079-9416431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
57, 13
               

               
Conread position:
               
1-350
               

               
Cow position:
               
chr21:18790719-18790385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
111, 9
               

               
Conread position:
               
1-350
               

               
Cow position:
               
chr21:32559517-32559184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
1-350
               

               
Cow position:
               
chr21:37345265-37344920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
90, 9
               

               
Conread position:
               
1-350
               

               
Cow position:
               
chr21:42348841-42348515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
68, 9
               

               
Conread position:
               
1-350
               

               
Cow position:
               
chr21:47764276-47763937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
64, 9
               

               
Conread position:
               
1-353
               

               
Cow position:
               
chr21:41597652-41597995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
81, 9
               

               
Conread position:
               
1-362
               

               
Cow position:
               
chr21:3361178-3360823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
48, 9
               

               
Conread position:
               
1-362
               

               
Cow position:
               
chr21:11645132-11644773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
197, 9
               

               
Conread position:
               
1-362
               

               
Cow position:
               
chr21:29484820-29485174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
196, 9
               

               
Conread position:
               
1-383
               

               
Cow position:
               
chr21:35997010-35997385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 9
               

               
Conread position:
               
1-386
               

               
Cow position:
               
chr21:23785866-23786247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 13
               

               
Conread position:
               
1-387
               

               
Cow position:
               
chr21:47823435-47823053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 8
               

               
Conread position:
               
1-393
               

               
Cow position:
               
chr21:18378681-18379061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 8
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr21:34159796-34160177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 8
               

               
Conread position:
               
1-406
               

               
Cow position:
               
chr21:4723316-4723719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
1-406
               

               
Cow position:
               
chr21:21223126-21223519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 8
               

               
Conread position:
               
1-412
               

               
Cow position:
               
chr21:30592467-30592051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
186, 9
               

               
Conread position:
               
1-414
               

               
Cow position:
               
chr21:4399636-4400058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
117, 9
               

               
Conread position:
               
1-415
               

               
Cow position:
               
chr21:31662297-31662713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 8
               

               
Conread position:
               
1-417
               

               
Cow position:
               
chr21:28810426-28810012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
43, 9
               

               
Conread position:
               
1-417
               

               
Cow position:
               
chr21:38449615-38449183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
68, 9
               

               
Conread position:
               
1-419
               

               
Cow position:
               
chr21:15742254-15741833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 8
               

               
Conread position:
               
1-419
               

               
Cow position:
               
chr21:34237231-34237621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
219, 9
               

               
Conread position:
               
1-419
               

               
Cow position:
               
chr21:44754940-44754538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr21:46849286-46848861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 9
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr21:33947410-33947001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 13
               

               
Conread position:
               
1-423
               

               
Cow position:
               
chr21:23801285-23800878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 8
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr21:30150429-30149989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 9
               

               
Conread position:
               
1-425
               

               
Cow position:
               
chr21:3254003-3254409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 9
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr21:4276755-4276345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 8
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr21:9353277-9353706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 9
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr21:20262497-20262070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
74, 9
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr21:27863683-27863240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
63, 9
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr21:34010554-34010118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
187, 9
               

               
Conread position:
               
2-183
               

               
Cow position:
               
chr21:24714490-24714674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
117, 8
               

               
Conread position:
               
2-242
               

               
Cow position:
               
chr21:36793730-36793972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
86, 8
               

               
Conread position:
               
2-285
               

               
Cow position:
               
chr21:15584573-15584299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
201, 25
               

               
Conread position:
               
2-331
               

               
Cow position:
               
chr21:32237134-32237441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
110, 86
               

               
Conread position:
               
2-362
               

               
Cow position:
               
chr21:24698328-24698673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 8
               

               
Conread position:
               
2-401
               

               
Cow position:
               
chr21:12087428-12087829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 126
               

               
Conread position:
               
2-415
               

               
Cow position:
               
chr21:46242402-46241993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 8
               

               
Conread position:
               
2-418
               

               
Cow position:
               
chr21:33727623-33727211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 8
               

               
Conread position:
               
3-133
               

               
Cow position:
               
chr21:13256643-13256773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-193
               

               
Cow position:
               
chr21:34658872-34659061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
113, 85
               

               
Conread position:
               
3-211
               

               
Cow position:
               
chr21:42500870-42501084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
3-227
               

               
Cow position:
               
chr21:912129-911903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
198, 133
               

               
Conread position:
               
3-240
               

               
Cow position:
               
chr21:20426371-20426605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
199, 7
               

               
Conread position:
               
3-256
               

               
Cow position:
               
chr21:23499985-23499733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
199, 89
               

               
Conread position:
               
3-263
               

               
Cow position:
               
chr21:5596985-5597250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
68, 7
               

               
Conread position:
               
3-267
               

               
Cow position:
               
chr21:4189672-4189943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
108, 135
               

               
Conread position:
               
3-268
               

               
Cow position:
               
chr21:3381244-3380975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
101, 80
               

               
Conread position:
               
3-269
               

               
Cow position:
               
chr21:28429287-28429545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
206, 107
               

               
Conread position:
               
3-271
               

               
Cow position:
               
chr21:37479794-37480061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
67, 138
               

               
Conread position:
               
3-280
               

               
Cow position:
               
chr21:46829429-46829157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
174, 7
               

               
Conread position:
               
3-285
               

               
Cow position:
               
chr21:13489480-13489766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
84, 145
               

               
Conread position:
               
3-291
               

               
Cow position:
               
chr21:28993787-28993495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
78, 7
               

               
Conread position:
               
3-294
               

               
Cow position:
               
chr21:4998649-4998367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
94, 136
               

               
Conread position:
               
3-294
               

               
Cow position:
               
chr21:39401432-39401718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
196, 133
               

               
Conread position:
               
3-294
               

               
Cow position:
               
chr21:47760613-47760896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
68, 117
               

               
Conread position:
               
3-295
               

               
Cow position:
               
chr21:16696208-16696502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
110, 15
               

               
Conread position:
               
3-303
               

               
Cow position:
               
chr21:25536834-25537136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
78, 24
               

               
Conread position:
               
3-346
               

               
Cow position:
               
chr21:24858149-24858492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
68, 139
               

               
Conread position:
               
3-350
               

               
Cow position:
               
chr21:27624550-27624879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
3-353
               

               
Cow position:
               
chr21:5898559-5898219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
88, 7
               

               
Conread position:
               
3-355
               

               
Cow position:
               
chr21:643171-643509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
184, 80
               

               
Conread position:
               
3-361
               

               
Cow position:
               
chr21:36819374-36819038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
67, 7
               

               
Conread position:
               
3-375
               

               
Cow position:
               
chr21:40589645-40589277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
68, 117
               

               
Conread position:
               
3-377
               

               
Cow position:
               
chr21:1058914-1059291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
83, 137
               

               
Conread position:
               
3-380
               

               
Cow position:
               
chr21:15445241-15444853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
81, 144
               

               
Conread position:
               
3-426
               

               
Cow position:
               
chr21:25286348-25286772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 7
               

               
Conread position:
               
3-426
               

               
Cow position:
               
chr21:34565375-34564955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 139
               

               
Conread position:
               
4-283
               

               
Cow position:
               
chr21:34053348-34053085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
4-293
               

               
Cow position:
               
chr21:1591387-1591682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 47
               

               
Conread position:
               
4-347
               

               
Cow position:
               
chr21:44671592-44671922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
67, 140
               

               
Conread position:
               
4-349
               

               
Cow position:
               
chr21:17193921-17193569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
109, 144
               

               
Conread position:
               
4-426
               

               
Cow position:
               
chr21:6833891-6834327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
112, 60
               

               
Conread position:
               
4-426
               

               
Cow position:
               
chr21:38900613-38901040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 139
               

               
Conread position:
               
4-426
               

               
Cow position:
               
chr21:45355675-45356092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 138
               

               
Conread position:
               
7-216
               

               
Cow position:
               
chr21:12973411-12973198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
109, 196
               

               
Conread position:
               
7-355
               

               
Cow position:
               
chr21:34653924-34654258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
204, 9
               

               
Conread position:
               
7-417
               

               
Cow position:
               
chr21:25800249-25800644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 55
               

               
Conread position:
               
7-419
               

               
Cow position:
               
chr21:4098717-4099117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 62
               

               
Conread position:
               
7-420
               

               
Cow position:
               
chr21:44093622-44094015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
66, 57
               

               
Conread position:
               
9-349
               

               
Cow position:
               
chr21:41974535-41974198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
62, 136
               

               
Conread position:
               
9-419
               

               
Cow position:
               
chr21:34739690-34740096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 103
               

               
Conread position:
               
10-295
               

               
Cow position:
               
chr21:10151639-10151935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
67, 79
               

               
Conread position:
               
12-195
               

               
Cow position:
               
chr21:45375462-45375651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
54, 112
               

               
Conread position:
               
12-202
               

               
Cow position:
               
chr21:12616986-12617173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
12-218
               

               
Cow position:
               
chr21:40058652-40058861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
173, 124
               

               
Conread position:
               
12-222
               

               
Cow position:
               
chr21:41957327-41957119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
195, 50
               

               
Conread position:
               
12-235
               

               
Cow position:
               
chr21:42459700-42459466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
46, 131
               

               
Conread position:
               
12-243
               

               
Cow position:
               
chr21:21077177-21077404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
184, 25
               

               
Conread position:
               
12-245
               

               
Cow position:
               
chr21:5137643-5137407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
111, 165
               

               
Conread position:
               
12-255
               

               
Cow position:
               
chr21:5455141-5454901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
44, 61
               

               
Conread position:
               
12-256
               

               
Cow position:
               
chr21:20925660-20925412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
104, 125
               

               
Conread position:
               
12-260
               

               
Cow position:
               
chr21:10514654-10514901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
73, 11
               

               
Conread position:
               
12-266
               

               
Cow position:
               
chr21:9848147-9847909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
73, 109
               

               
Conread position:
               
12-267
               

               
Cow position:
               
chr21:44155-44407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
100, 49
               

               
Conread position:
               
12-277
               

               
Cow position:
               
chr21:12961056-12960785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
56, 130
               

               
Conread position:
               
12-284
               

               
Cow position:
               
chr21:23150173-23149902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
189, 49
               

               
Conread position:
               
12-285
               

               
Cow position:
               
chr21:13840169-13840447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
74, 32
               

               
Conread position:
               
12-287
               

               
Cow position:
               
chr21:28027650-28027918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
61, 203
               

               
Conread position:
               
12-287
               

               
Cow position:
               
chr21:35897779-35897504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
155, 49
               

               
Conread position:
               
12-288
               

               
Cow position:
               
chr21:10727127-10727400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
186, 62
               

               
Conread position:
               
12-288
               

               
Cow position:
               
chr21:42023971-42024243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
12-291
               

               
Cow position:
               
chr21:13048350-13048067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
96, 125
               

               
Conread position:
               
12-291
               

               
Cow position:
               
chr21:19196320-19196038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
65, 134
               

               
Conread position:
               
12-291
               

               
Cow position:
               
chr21:24642365-24642646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
16, 53
               

               
Conread position:
               
12-291
               

               
Cow position:
               
chr21:30607241-30606960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
88, 71
               

               
Conread position:
               
12-291
               

               
Cow position:
               
chr21:41878323-41878596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
177, 24
               

               
Conread position:
               
12-294
               

               
Cow position:
               
chr21:4905126-4904839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
59, 134
               

               
Conread position:
               
12-294
               

               
Cow position:
               
chr21:13488366-13488655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
59, 75
               

               
Conread position:
               
12-294
               

               
Cow position:
               
chr21:45330761-45330479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
59, 136
               

               
Conread position:
               
12-294
               

               
Cow position:
               
chr21:46912388-46912673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
90, 60
               

               
Conread position:
               
12-303
               

               
Cow position:
               
chr21:41579594-41579894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
61, 132
               

               
Conread position:
               
12-318
               

               
Cow position:
               
chr21:34391124-34390826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
183, 57
               

               
Conread position:
               
12-340
               

               
Cow position:
               
chr21:42414256-42413926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
63, 131
               

               
Conread position:
               
12-340
               

               
Cow position:
               
chr21:42841746-42841426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
184, 71
               

               
Conread position:
               
12-345
               

               
Cow position:
               
chr21:44826037-44825710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
201, 52
               

               
Conread position:
               
12-346
               

               
Cow position:
               
chr21:7582063-7581728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
60, 128
               

               
Conread position:
               
12-346
               

               
Cow position:
               
chr21:23322237-23321901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
59, 135
               

               
Conread position:
               
12-346
               

               
Cow position:
               
chr21:36795450-36795780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
176, 61
               

               
Conread position:
               
12-346
               

               
Cow position:
               
chr21:41155707-41156047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
57, 127
               

               
Conread position:
               
12-346
               

               
Cow position:
               
chr21:42135777-42135439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
59, 133
               

               
Conread position:
               
12-351
               

               
Cow position:
               
chr21:45921212-45920876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
87, 125
               

               
Conread position:
               
12-353
               

               
Cow position:
               
chr21:33568-33903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
107, 78
               

               
Conread position:
               
12-353
               

               
Cow position:
               
chr21:28244322-28244654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
80, 49
               

               
Conread position:
               
12-354
               

               
Cow position:
               
chr21:12801900-12801561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
186, 119
               

               
Conread position:
               
12-354
               

               
Cow position:
               
chr21:13365191-13365529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
157, 68
               

               
Conread position:
               
12-355
               

               
Cow position:
               
chr21:3585512-3585184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
176, 52
               

               
Conread position:
               
12-361
               

               
Cow position:
               
chr21:32297664-32297326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
59, 130
               

               
Conread position:
               
12-416
               

               
Cow position:
               
chr21:23586723-23587139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 128
               

               
Conread position:
               
12-417
               

               
Cow position:
               
chr21:15911247-15911646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 51
               

               
Conread position:
               
12-419
               

               
Cow position:
               
chr21:4282021-4281614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
106, 57
               

               
Conread position:
               
12-421
               

               
Cow position:
               
chr21:31576361-31576741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 51
               

               
Conread position:
               
12-422
               

               
Cow position:
               
chr21:28211043-28211445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
61, 128
               

               
Conread position:
               
12-425
               

               
Cow position:
               
chr21:12153982-12154401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
51, 132
               

               
Conread position:
               
13-161
               

               
Cow position:
               
chr21:30990421-30990275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
13-197
               

               
Cow position:
               
chr21:393869-394050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
45, 129
               

               
Conread position:
               
13-197
               

               
Cow position:
               
chr21:18494813-18495000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
54, 132
               

               
Conread position:
               
13-197
               

               
Cow position:
               
chr21:48484596-48484416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
119, 41
               

               
Conread position:
               
13-245
               

               
Cow position:
               
chr21:36642755-36642984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
108, 77
               

               
Conread position:
               
13-251
               

               
Cow position:
               
chr21:13898036-13898274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
98, 56
               

               
Conread position:
               
13-268
               

               
Cow position:
               
chr21:3813635-3813381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
108, 126
               

               
Conread position:
               
13-276
               

               
Cow position:
               
chr21:17174992-17175254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
51, 133
               

               
Conread position:
               
13-286
               

               
Cow position:
               
chr21:22860849-22861123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
186, 60
               

               
Conread position:
               
13-287
               

               
Cow position:
               
chr21:81918-82189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
58, 135
               

               
Conread position:
               
13-287
               

               
Cow position:
               
chr21:4080200-4080470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
58, 128
               

               
Conread position:
               
13-287
               

               
Cow position:
               
chr21:12366235-12366493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
111, 103
               

               
Conread position:
               
13-287
               

               
Cow position:
               
chr21:40786518-40786799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
60, 223
               

               
Conread position:
               
13-287
               

               
Cow position:
               
chr21:40899184-40899461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
58, 189
               

               
Conread position:
               
13-294
               

               
Cow position:
               
chr21:18800681-18800406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
204, 125
               

               
Conread position:
               
13-294
               

               
Cow position:
               
chr21:19258674-19258946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
62, 112
               

               
Conread position:
               
13-346
               

               
Cow position:
               
chr21:14760428-14760742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
26, 21
               

               
Conread position:
               
13-346
               

               
Cow position:
               
chr21:47465273-47464942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
37, 73
               

               
Conread position:
               
13-347
               

               
Cow position:
               
chr21:23478872-23478554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
43, 192
               

               
Conread position:
               
13-347
               

               
Cow position:
               
chr21:42384353-42384686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
60, 128
               

               
Conread position:
               
13-350
               

               
Cow position:
               
chr21:23672591-23672926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
58, 17
               

               
Conread position:
               
13-362
               

               
Cow position:
               
chr21:10633793-10633447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
96, 91
               

               
Conread position:
               
13-366
               

               
Cow position:
               
chr21:28989460-28989808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
54, 127
               

               
Conread position:
               
13-406
               

               
Cow position:
               
chr21:30849091-30848691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
59, 15
               

               
Conread position:
               
13-414
               

               
Cow position:
               
chr21:21216293-21215892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
188, 102
               

               
Conread position:
               
13-417
               

               
Cow position:
               
chr21:33791520-33791129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
45, 54
               

               
Conread position:
               
13-419
               

               
Cow position:
               
chr21:641432-641854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
71, 23
               

               
Conread position:
               
13-426
               

               
Cow position:
               
chr21:33997374-33996973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 48
               

               
Conread position:
               
14-244
               

               
Cow position:
               
chr21:32665926-32665696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
44, 136
               

               
Conread position:
               
14-255
               

               
Cow position:
               
chr21:39450320-39450071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
57, 133
               

               
Conread position:
               
14-271
               

               
Cow position:
               
chr21:2679401-2679663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
55, 128
               

               
Conread position:
               
14-276
               

               
Cow position:
               
chr21:24865005-24865267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
57, 105
               

               
Conread position:
               
14-287
               

               
Cow position:
               
chr21:13035199-13034916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
23, 107
               

               
Conread position:
               
14-294
               

               
Cow position:
               
chr21:22718932-22718656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
68, 130
               

               
Conread position:
               
14-346
               

               
Cow position:
               
chr21:26244780-26245091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
14-350
               

               
Cow position:
               
chr21:39888895-39888558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
201, 38
               

               
Conread position:
               
14-412
               

               
Cow position:
               
chr21:46607735-46607349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 36
               

               
Conread position:
               
14-426
               

               
Cow position:
               
chr21:5426792-5427204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
105, 47
               

               
Conread position:
               
15-355
               

               
Cow position:
               
chr21:17183772-17184102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
107, 5
               

               
Conread position:
               
17-259
               

               
Cow position:
               
chr21:41455099-41454854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
54, 103
               

               
Conread position:
               
17-261
               

               
Cow position:
               
chr21:8351453-8351215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
47, 108
               

               
Conread position:
               
17-287
               

               
Cow position:
               
chr21:22856066-22856340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
52, 130
               

               
Conread position:
               
17-287
               

               
Cow position:
               
chr21:29214297-29214038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
172, 54
               

               
Conread position:
               
17-287
               

               
Cow position:
               
chr21:45151771-45151507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
66, 75
               

               
Conread position:
               
17-295
               

               
Cow position:
               
chr21:44515126-44515393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
111, 27
               

               
Conread position:
               
17-318
               

               
Cow position:
               
chr21:18850367-18850075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
183, 35
               

               
Conread position:
               
17-345
               

               
Cow position:
               
chr21:20160535-20160852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
43, 48
               

               
Conread position:
               
17-355
               

               
Cow position:
               
chr21:33982957-33982624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
54, 105
               

               
Conread position:
               
17-362
               

               
Cow position:
               
chr21:6713673-6713331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
11, 33
               

               
Conread position:
               
19-277
               

               
Cow position:
               
chr21:18041989-18041735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
184, 41
               

               
Conread position:
               
19-346
               

               
Cow position:
               
chr21:10005032-10004709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
65, 85
               

               
Conread position:
               
19-350
               

               
Cow position:
               
chr21:6051360-6051684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
63, 123
               

               
Conread position:
               
19-423
               

               
Cow position:
               
chr21:32339883-32339476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 45
               

               
Conread position:
               
20-284
               

               
Cow position:
               
chr21:11359892-11360155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
51, 73
               

               
Conread position:
               
20-353
               

               
Cow position:
               
chr21:49700181-49699856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
95, 117
               

               
Conread position:
               
20-355
               

               
Cow position:
               
chr21:27229940-27229609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
72, 120
               

               
Conread position:
               
20-420
               

               
Cow position:
               
chr21:6058785-6058397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
59, 129
               

               
Conread position:
               
21-263
               

               
Cow position:
               
chr21:8235689-8235457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
177, 62
               

               
Conread position:
               
21-315
               

               
Cow position:
               
chr21:43357408-43357110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
50, 126
               

               
Conread position:
               
21-338
               

               
Cow position:
               
chr21:35354393-35354702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
194, 25
               

               
Conread position:
               
21-346
               

               
Cow position:
               
chr21:28923972-28924287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
97, 67
               

               
Conread position:
               
21-350
               

               
Cow position:
               
chr21:13585214-13584880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
21, 190
               

               
Conread position:
               
21-351
               

               
Cow position:
               
chr21:28626094-28626419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
50, 67
               

               
Conread position:
               
22-271
               

               
Cow position:
               
chr21:23192661-23192403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
48, 123
               

               
Conread position:
               
22-298
               

               
Cow position:
               
chr21:37941826-37941551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
205, 94
               

               
Conread position:
               
22-346
               

               
Cow position:
               
chr21:42007603-42007285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
90, 39
               

               
Conread position:
               
23-242
               

               
Cow position:
               
chr21:39809757-39809971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
175, 60
               

               
Conread position:
               
24-355
               

               
Cow position:
               
chr21:14452096-14452419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
103, 16
               

               
Conread position:
               
25-294
               

               
Cow position:
               
chr21:12462111-12461839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 117
               

               
Conread position:
               
25-325
               

               
Cow position:
               
chr21:26614810-26614506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
48, 19
               

               
Conread position:
               
27-211
               

               
Cow position:
               
chr21:41583131-41583317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
29, 166
               

               
Conread position:
               
27-254
               

               
Cow position:
               
chr21:2293854-2294072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
85, 34
               

               
Conread position:
               
27-278
               

               
Cow position:
               
chr21:6102398-6102147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
44, 66
               

               
Conread position:
               
27-287
               

               
Cow position:
               
chr21:11250727-11250991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
44, 178
               

               
Conread position:
               
27-422
               

               
Cow position:
               
chr21:957529-957942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
36, 111
               

               
Conread position:
               
27-426
               

               
Cow position:
               
chr21:48234297-48233899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
158, 76
               

               
Conread position:
               
28-287
               

               
Cow position:
               
chr21:33391925-33392181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
48, 104
               

               
Conread position:
               
28-355
               

               
Cow position:
               
chr21:20152810-20153139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
86, 120
               

               
Conread position:
               
29-346
               

               
Cow position:
               
chr21:29978899-29978583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 112
               

               
Conread position:
               
29-353
               

               
Cow position:
               
chr21:13089604-13089290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
17, 9
               

               
Conread position:
               
29-426
               

               
Cow position:
               
chr21:12723020-12723406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
42, 58
               

               
Conread position:
               
30-245
               

               
Cow position:
               
chr21:35569512-35569304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
30-269
               

               
Cow position:
               
chr21:24222677-24222433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
34, 115
               

               
Conread position:
               
30-291
               

               
Cow position:
               
chr21:20260456-20260193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
201, 108
               

               
Conread position:
               
30-301
               

               
Cow position:
               
chr21:18845155-18844878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
33, 111
               

               
Conread position:
               
30-355
               

               
Cow position:
               
chr21:9990377-9990695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
43, 112
               

               
Conread position:
               
30-415
               

               
Cow position:
               
chr21:13754663-13755028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
360, 30
               

               
Conread position:
               
34-237
               

               
Cow position:
               
chr21:4568154-4568357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
168, 98
               

               
Conread position:
               
36-408
               

               
Cow position:
               
chr21:34151451-34151838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
86, 104
               

               
Conread position:
               
37-266
               

               
Cow position:
               
chr21:20192774-20192998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
151, 47
               

               
Conread position:
               
37-421
               

               
Cow position:
               
chr21:12301632-12301258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 48
               

               
Conread position:
               
38-256
               

               
Cow position:
               
chr21:37886283-37886502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
26, 103
               

               
Conread position:
               
39-194
               

               
Cow position:
               
chr21:27810278-27810436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
34, 103
               

               
Conread position:
               
40-245
               

               
Cow position:
               
chr21:2412635-2412843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
47, 78
               

               
Conread position:
               
44-294
               

               
Cow position:
               
chr21:36789672-36789923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
27, 76
               

               
Conread position:
               
44-424
               

               
Cow position:
               
chr21:45923769-45923410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
27, 76
               

               
Conread position:
               
44-426
               

               
Cow position:
               
chr21:30222220-30222619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
27, 43
               

               
Conread position:
               
45-423
               

               
Cow position:
               
chr21:6316085-6316465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
26, 196
               

               
Conread position:
               
45-426
               

               
Cow position:
               
chr21:31004805-31004416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
26, 179
               

               
Conread position:
               
47-406
               

               
Cow position:
               
chr21:46552218-46551868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
75, 27
               

               
Conread position:
               
47-415
               

               
Cow position:
               
chr21:6697148-6696770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
161, 79
               

               
Conread position:
               
47-420
               

               
Cow position:
               
chr21:21181058-21181429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 173
               

               
Conread position:
               
47-426
               

               
Cow position:
               
chr21:11676161-11675795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 14
               

               
Conread position:
               
51-240
               

               
Cow position:
               
chr21:9980077-9979895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
148, 10
               

               
Conread position:
               
51-417
               

               
Cow position:
               
chr21:32574604-32574970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
86, 130
               

               
Conread position:
               
54-426
               

               
Cow position:
               
chr21:23980293-23979902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
64, 89
               

               
Conread position:
               
55-294
               

               
Cow position:
               
chr21:2657709-2657937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
37, 64
               

               
Conread position:
               
56-346
               

               
Cow position:
               
chr21:30835255-30835540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
57, 17
               

               
Conread position:
               
57-294
               

               
Cow position:
               
chr21:10561692-10561455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
141, 84
               

               
Conread position:
               
57-294
               

               
Cow position:
               
chr21:17008873-17009109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
139, 59
               

               
Conread position:
               
58-419
               

               
Cow position:
               
chr21:10673024-10673380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
274, 50
               

               
Conread position:
               
61-290
               

               
Cow position:
               
chr21:11740221-11739994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
10, 66
               

               
Conread position:
               
61-349
               

               
Cow position:
               
chr21:42022186-42022455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
64-340
               

               
Cow position:
               
chr21:32904256-32903984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
130, 52
               

               
Conread position:
               
64-426
               

               
Cow position:
               
chr21:8206671-8207034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 59
               

               
Conread position:
               
65-364
               

               
Cow position:
               
chr21:31200073-31200353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
86, 135
               

               
Conread position:
               
65-406
               

               
Cow position:
               
chr21:49649534-49649854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
78, 51
               

               
Conread position:
               
66-256
               

               
Cow position:
               
chr21:34722885-34722697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
66-287
               

               
Cow position:
               
chr21:18155669-18155444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
50, 76
               

               
Conread position:
               
66-414
               

               
Cow position:
               
chr21:49470892-49471221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
15, 24
               

               
Conread position:
               
66-426
               

               
Cow position:
               
chr21:20418784-20418429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
52, 76
               

               
Conread position:
               
67-262
               

               
Cow position:
               
chr21:11639924-11640119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
125, 74
               

               
Conread position:
               
67-345
               

               
Cow position:
               
chr21:10118459-10118742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
38, 81
               

               
Conread position:
               
67-387
               

               
Cow position:
               
chr21:18941928-18941617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 72
               

               
Conread position:
               
67-415
               

               
Cow position:
               
chr21:22353329-22352989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 72
               

               
Conread position:
               
67-418
               

               
Cow position:
               
chr21:17428404-17428747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 72
               

               
Conread position:
               
67-426
               

               
Cow position:
               
chr21:41514706-41515052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
113, 49
               

               
Conread position:
               
68-307
               

               
Cow position:
               
chr21:38664541-38664782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
109, 50
               

               
Conread position:
               
69-294
               

               
Cow position:
               
chr21:22465101-22465319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
89, 69
               

               
Conread position:
               
69-408
               

               
Cow position:
               
chr21:22121426-22121761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
129, 66
               

               
Conread position:
               
74-346
               

               
Cow position:
               
chr21:6997847-6998124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
45, 59
               

               
Conread position:
               
74-414
               

               
Cow position:
               
chr21:45906712-45906356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
192, 65
               

               
Conread position:
               
76-349
               

               
Cow position:
               
chr21:22210333-22210067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
139, 65
               

               
Conread position:
               
77-272
               

               
Cow position:
               
chr21:37014493-37014299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
13, 62
               

               
Conread position:
               
77-299
               

               
Cow position:
               
chr21:11198237-11198014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
36, 65
               

               
Conread position:
               
77-420
               

               
Cow position:
               
chr21:9940282-9939938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 157
               

               
Conread position:
               
81-317
               

               
Cow position:
               
chr21:4280756-4280526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
115, 60
               

               
Conread position:
               
90-262
               

               
Cow position:
               
chr21:33360109-33359940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
28, 52
               

               
Conread position:
               
90-340
               

               
Cow position:
               
chr21:36909859-36910102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
22, 50
               

               
Conread position:
               
90-377
               

               
Cow position:
               
chr21:10410143-10410430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
24, 57
               

               
Conread position:
               
90-380
               

               
Cow position:
               
chr21:41107837-41107547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
20, 70
               

               
Conread position:
               
90-414
               

               
Cow position:
               
chr21:13736978-13737294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
112, 83
               

               
Conread position:
               
90-417
               

               
Cow position:
               
chr21:31661930-31662248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 55
               

               
Conread position:
               
91-294
               

               
Cow position:
               
chr21:45262886-45262682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
97, 71
               

               
Conread position:
               
91-426
               

               
Cow position:
               
chr21:47714081-47713731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
40, 8
               

               
Conread position:
               
92-411
               

               
Cow position:
               
chr21:33414158-33413835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
250, 49
               

               
Conread position:
               
93-340
               

               
Cow position:
               
chr21:1511219-1511460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
85, 48
               

               
Conread position:
               
95-294
               

               
Cow position:
               
chr21:40432379-40432573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
23, 47
               

               
Conread position:
               
95-347
               

               
Cow position:
               
chr21:30256340-30256096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
56, 23
               

               
Conread position:
               
96-424
               

               
Cow position:
               
chr21:44214055-44214386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
92, 43
               

               
Conread position:
               
100-355
               

               
Cow position:
               
chr21:47363802-47363548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
99, 17
               

               
Conread position:
               
100-426
               

               
Cow position:
               
chr21:15544283-15543962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
115, 41
               

               
Conread position:
               
101-423
               

               
Cow position:
               
chr21:47715608-47715290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 104
               

               
Conread position:
               
102-413
               

               
Cow position:
               
chr21:23397908-23397607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 32
               

               
Conread position:
               
103-340
               

               
Cow position:
               
chr21:40192365-40192134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
37, 99
               

               
Conread position:
               
103-420
               

               
Cow position:
               
chr21:28919585-28919260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
96, 13
               

               
Conread position:
               
106-294
               

               
Cow position:
               
chr21:297694-297882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
82, 33
               

               
Conread position:
               
108-350
               

               
Cow position:
               
chr21:868982-868742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
93, 33
               

               
Conread position:
               
110-293
               

               
Cow position:
               
chr21:9302482-9302299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
86, 31
               

               
Conread position:
               
111-327
               

               
Cow position:
               
chr21:5464693-5464906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
88, 30
               

               
Conread position:
               
118-284
               

               
Cow position:
               
chr21:19513818-19513985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
93, 21
               

               
Conread position:
               
138-382
               

               
Cow position:
               
chr21:8184253-8184501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
6, 92
               

               
Conread position:
               
141-318
               

               
Cow position:
               
chr21:38774159-38774338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
10, 95
               

               
Conread position:
               
141-346
               

               
Cow position:
               
chr21:10538275-10538078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
141-348
               

               
Cow position:
               
chr21:471652-471853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
57, 81
               

               
Conread position:
               
141-350
               

               
Cow position:
               
chr21:38720227-38720430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
55, 73
               

               
Conread position:
               
141-390
               

               
Cow position:
               
chr21:26753471-26753711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
141-410
               

               
Cow position:
               
chr21:15239258-15239519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
70, 44
               

               
Conread position:
               
141-414
               

               
Cow position:
               
chr21:42209656-42209380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
62, 90
               

               
Conread position:
               
141-415
               

               
Cow position:
               
chr21:39509414-39509142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
59, 91
               

               
Conread position:
               
141-420
               

               
Cow position:
               
chr21:8420598-8420870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
54, 91
               

               
Conread position:
               
141-422
               

               
Cow position:
               
chr21:36371461-36371735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
57, 90
               

               
Conread position:
               
142-417
               

               
Cow position:
               
chr21:13395572-13395849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
154, 54
               

               
Conread position:
               
143-418
               

               
Cow position:
               
chr21:37235362-37235632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 35
               

               
Conread position:
               
145-392
               

               
Cow position:
               
chr21:37718465-37718227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
59, 86
               

               
Conread position:
               
146-419
               

               
Cow position:
               
chr21:6387980-6388240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
36, 61
               

               
Conread position:
               
157-389
               

               
Cow position:
               
chr21:40769281-40769509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
48, 77
               

               
Conread position:
               
157-414
               

               
Cow position:
               
chr21:7768425-7768691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
31, 76
               

               
Conread position:
               
162-414
               

               
Cow position:
               
chr21:24674728-24674962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
232, 51
               

               
Conread position:
               
162-425
               

               
Cow position:
               
chr21:13358316-13358586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
38, 63
               

               
Conread position:
               
176-386
               

               
Cow position:
               
chr21:23767879-23768086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
28, 57
               

               
Conread position:
               
196-426
               

               
Cow position:
               
chr21:8671429-8671650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
201, 33
               

               
Conread position:
               
202-425
               

               
Cow position:
               
chr21:18135834-18135612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
143, 27
               

               
Conread position:
               
205-400
               

               
Cow position:
               
chr21:19860126-19859938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
205-406
               

               
Cow position:
               
chr21:13418189-13418001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
213-422
               

               
Cow position:
               
chr21:27480498-27480698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
116, 16
               

               
Conread position:
               
225-415
               

               
Cow position:
               
chr21:26147138-26147325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
164, 31
               

               
Conread position:
               
228-419
               

               
Cow position:
               
chr21:17807070-17806888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
231-420
               

               
Cow position:
               
chr21:2413119-2413301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
239-417
               

               
Cow position:
               
chr21:22398236-22398397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
240-414
               

               
Cow position:
               
chr21:41197970-41197806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
240-425
               

               
Cow position:
               
chr21:34649115-34648932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
145, 53
               

               
Conread position:
               
249-420
               

               
Cow position:
               
chr21:49661751-49661588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
130, 43
               

               
Conread position:
               
251-415
               

               
Cow position:
               
chr21:44220449-44220613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
81, 38
               

               
Conread position:
               
258-420
               

               
Cow position:
               
chr21:6012820-6012661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
125, 33
               

               
Conread position:
               
265-422
               

               
Cow position:
               
chr21:43344996-43345147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
109, 24
               

               
Conread position:
               
296-423
               

               
Cow position:
               
chr21:38628207-38628332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
302-424
               

               
Cow position:
               
chr21:36469790-36469910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
27, 0
               
Show alignments to all cow chromosomes.