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Cow genome map

           
Conread name:
           
mE3-MI-P-E3-acw-d-07-1-UM.s1
        

               
Conread position:
               
1-193
               

               
Cow position:
               
chr25:7800907-7801100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
1-194
               

               
Cow position:
               
chr25:6256167-6255974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
111, 9
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr25:8347280-8347472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
110, 9
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr25:10365981-10365784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
62, 9
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr25:395126-395355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
63, 8
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr25:8918507-8918269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
51, 9
               

               
Conread position:
               
1-245
               

               
Cow position:
               
chr25:9961407-9961159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
41, 17
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr25:12817143-12817397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr25:6891748-6891504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
120, 9
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr25:14791523-14791792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
63, 9
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr25:8560640-8560907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 8
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr25:8120547-8120823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr25:33260511-33260777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
111, 8
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr25:36535664-36535388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
83, 14
               

               
Conread position:
               
1-279
               

               
Cow position:
               
chr25:38135519-38135798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
186, 9
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr25:1735545-1735271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr25:22297246-22296968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
199, 9
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr25:5837195-5836902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr25:6464258-6463975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
115, 9
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr25:12081537-12081266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
111, 9
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr25:12261123-12260833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr25:12293980-12293691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
64, 9
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr25:20402949-20402649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr25:15377104-15377388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
197, 9
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr25:18294542-18294252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
111, 13
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr25:20348629-20348931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
72, 9
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr25:23829346-23829067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
203, 9
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr25:30279436-30279141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
67, 9
               

               
Conread position:
               
1-301
               

               
Cow position:
               
chr25:18988147-18988458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
1-301
               

               
Cow position:
               
chr25:21266777-21267062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
25, 13
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr25:18206529-18206208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
126, 9
               

               
Conread position:
               
1-331
               

               
Cow position:
               
chr25:21245836-21245508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
123, 9
               

               
Conread position:
               
1-332
               

               
Cow position:
               
chr25:20496311-20496635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 8
               

               
Conread position:
               
1-335
               

               
Cow position:
               
chr25:34669015-34669342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
66, 8
               

               
Conread position:
               
1-346
               

               
Cow position:
               
chr25:7581657-7581316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
81, 9
               

               
Conread position:
               
1-346
               

               
Cow position:
               
chr25:13569396-13569065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
35, 9
               

               
Conread position:
               
1-346
               

               
Cow position:
               
chr25:17658385-17658722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
111, 9
               

               
Conread position:
               
1-346
               

               
Cow position:
               
chr25:28188178-28187834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
72, 9
               

               
Conread position:
               
1-347
               

               
Cow position:
               
chr25:6683290-6682950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
187, 9
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr25:15254560-15254234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
1-353
               

               
Cow position:
               
chr25:6474328-6473969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
63, 9
               

               
Conread position:
               
1-353
               

               
Cow position:
               
chr25:6961379-6961033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
193, 9
               

               
Conread position:
               
1-353
               

               
Cow position:
               
chr25:26087286-26087639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
1-359
               

               
Cow position:
               
chr25:11662049-11661693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
70, 13
               

               
Conread position:
               
1-376
               

               
Cow position:
               
chr25:12840947-12840571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
136, 9
               

               
Conread position:
               
1-380
               

               
Cow position:
               
chr25:22203919-22203534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
67, 9
               

               
Conread position:
               
1-381
               

               
Cow position:
               
chr25:15368449-15368839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
1-383
               

               
Cow position:
               
chr25:10012278-10011912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
69, 9
               

               
Conread position:
               
1-396
               

               
Cow position:
               
chr25:27504413-27504039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
66, 9
               

               
Conread position:
               
1-405
               

               
Cow position:
               
chr25:37469548-37469905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
1-406
               

               
Cow position:
               
chr25:23410434-23410831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 9
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr25:20625160-20624762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 9
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr25:8576464-8576869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 8
               

               
Conread position:
               
1-416
               

               
Cow position:
               
chr25:7216599-7217018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
62, 16
               

               
Conread position:
               
1-416
               

               
Cow position:
               
chr25:36081644-36082069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
72, 9
               

               
Conread position:
               
1-417
               

               
Cow position:
               
chr25:18000745-18000348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 9
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr25:14570140-14570552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 9
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr25:24669660-24669247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
301, 9
               

               
Conread position:
               
2-383
               

               
Cow position:
               
chr25:2126241-2126609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
64, 18
               

               
Conread position:
               
2-383
               

               
Cow position:
               
chr25:40957215-40956840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 8
               

               
Conread position:
               
2-415
               

               
Cow position:
               
chr25:34970251-34970637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 12
               

               
Conread position:
               
3-172
               

               
Cow position:
               
chr25:18448610-18448778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
67, 7
               

               
Conread position:
               
3-193
               

               
Cow position:
               
chr25:36026779-36026970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
70, 140
               

               
Conread position:
               
3-195
               

               
Cow position:
               
chr25:2136123-2136317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
96, 139
               

               
Conread position:
               
3-197
               

               
Cow position:
               
chr25:7329317-7329511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
66, 7
               

               
Conread position:
               
3-207
               

               
Cow position:
               
chr25:13333195-13333400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
3-217
               

               
Cow position:
               
chr25:15694756-15694963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
3-253
               

               
Cow position:
               
chr25:31732964-31732712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
65, 94
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr25:12234985-12234738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
220, 7
               

               
Conread position:
               
3-272
               

               
Cow position:
               
chr25:11666428-11666689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
194, 58
               

               
Conread position:
               
3-277
               

               
Cow position:
               
chr25:35344810-35345076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
191, 115
               

               
Conread position:
               
3-291
               

               
Cow position:
               
chr25:4547948-4547658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
68, 140
               

               
Conread position:
               
3-294
               

               
Cow position:
               
chr25:10218278-10217987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
29, 7
               

               
Conread position:
               
3-294
               

               
Cow position:
               
chr25:16319360-16319078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
67, 124
               

               
Conread position:
               
3-295
               

               
Cow position:
               
chr25:14196628-14196926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
68, 141
               

               
Conread position:
               
3-302
               

               
Cow position:
               
chr25:26238643-26238933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
251, 135
               

               
Conread position:
               
3-336
               

               
Cow position:
               
chr25:788041-788360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
193, 27
               

               
Conread position:
               
3-341
               

               
Cow position:
               
chr25:30035321-30035657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
224, 7
               

               
Conread position:
               
3-349
               

               
Cow position:
               
chr25:20023621-20023272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
68, 139
               

               
Conread position:
               
3-411
               

               
Cow position:
               
chr25:29312569-29312160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
64, 7
               

               
Conread position:
               
3-413
               

               
Cow position:
               
chr25:14467312-14466921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 7
               

               
Conread position:
               
3-414
               

               
Cow position:
               
chr25:5407520-5407913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
183, 49
               

               
Conread position:
               
3-425
               

               
Cow position:
               
chr25:24405963-24405542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 7
               

               
Conread position:
               
4-389
               

               
Cow position:
               
chr25:10748729-10748349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 21
               

               
Conread position:
               
4-415
               

               
Cow position:
               
chr25:17702189-17701811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
339, 60
               

               
Conread position:
               
4-421
               

               
Cow position:
               
chr25:22735898-22736289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
193, 57
               

               
Conread position:
               
7-277
               

               
Cow position:
               
chr25:17365481-17365212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
197, 42
               

               
Conread position:
               
7-328
               

               
Cow position:
               
chr25:18130850-18131166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 119
               

               
Conread position:
               
7-418
               

               
Cow position:
               
chr25:18265939-18266346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 45
               

               
Conread position:
               
8-187
               

               
Cow position:
               
chr25:18237532-18237713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
50, 115
               

               
Conread position:
               
9-416
               

               
Cow position:
               
chr25:40338694-40339062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
104, 35
               

               
Conread position:
               
9-421
               

               
Cow position:
               
chr25:11131359-11131767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 129
               

               
Conread position:
               
12-187
               

               
Cow position:
               
chr25:10137879-10138046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
12-198
               

               
Cow position:
               
chr25:12899536-12899723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
59, 19
               

               
Conread position:
               
12-242
               

               
Cow position:
               
chr25:16001739-16001514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
197, 74
               

               
Conread position:
               
12-246
               

               
Cow position:
               
chr25:36033217-36033453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
67, 129
               

               
Conread position:
               
12-252
               

               
Cow position:
               
chr25:20211305-20211059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
50, 114
               

               
Conread position:
               
12-262
               

               
Cow position:
               
chr25:15319701-15319951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
185, 124
               

               
Conread position:
               
12-262
               

               
Cow position:
               
chr25:35332946-35333189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
22, 38
               

               
Conread position:
               
12-263
               

               
Cow position:
               
chr25:25827243-25827503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
59, 225
               

               
Conread position:
               
12-271
               

               
Cow position:
               
chr25:21193163-21192890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
12-286
               

               
Cow position:
               
chr25:5847026-5846754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
59, 110
               

               
Conread position:
               
12-287
               

               
Cow position:
               
chr25:2046772-2046504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
106, 59
               

               
Conread position:
               
12-287
               

               
Cow position:
               
chr25:16922013-16921741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
51, 132
               

               
Conread position:
               
12-291
               

               
Cow position:
               
chr25:23053337-23053617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
59, 87
               

               
Conread position:
               
12-291
               

               
Cow position:
               
chr25:25051603-25051318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
59, 82
               

               
Conread position:
               
12-293
               

               
Cow position:
               
chr25:20785803-20785524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
200, 93
               

               
Conread position:
               
12-294
               

               
Cow position:
               
chr25:25754216-25753934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
58, 80
               

               
Conread position:
               
12-294
               

               
Cow position:
               
chr25:38425146-38425423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
201, 71
               

               
Conread position:
               
12-340
               

               
Cow position:
               
chr25:61438-61755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
100, 128
               

               
Conread position:
               
12-346
               

               
Cow position:
               
chr25:7641673-7641339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
59, 133
               

               
Conread position:
               
12-346
               

               
Cow position:
               
chr25:15714662-15714984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
59, 118
               

               
Conread position:
               
12-346
               

               
Cow position:
               
chr25:21895105-21894774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 124
               

               
Conread position:
               
12-346
               

               
Cow position:
               
chr25:36761887-36762216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
100, 125
               

               
Conread position:
               
12-347
               

               
Cow position:
               
chr25:30319668-30319341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
100, 130
               

               
Conread position:
               
12-347
               

               
Cow position:
               
chr25:33550286-33550624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
56, 118
               

               
Conread position:
               
12-349
               

               
Cow position:
               
chr25:34169735-34170060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
176, 126
               

               
Conread position:
               
12-352
               

               
Cow position:
               
chr25:38981892-38982209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
12-412
               

               
Cow position:
               
chr25:17975586-17975202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
203, 126
               

               
Conread position:
               
12-415
               

               
Cow position:
               
chr25:26654687-26655092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
53, 79
               

               
Conread position:
               
12-426
               

               
Cow position:
               
chr25:22575740-22575337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 22
               

               
Conread position:
               
13-245
               

               
Cow position:
               
chr25:4002578-4002816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
77, 133
               

               
Conread position:
               
13-245
               

               
Cow position:
               
chr25:5514788-5515028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
58, 133
               

               
Conread position:
               
13-272
               

               
Cow position:
               
chr25:9957250-9956997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
105, 48
               

               
Conread position:
               
13-285
               

               
Cow position:
               
chr25:2194727-2194985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
54, 109
               

               
Conread position:
               
13-287
               

               
Cow position:
               
chr25:35347686-35347959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
45, 129
               

               
Conread position:
               
13-294
               

               
Cow position:
               
chr25:35612515-35612251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
180, 51
               

               
Conread position:
               
13-356
               

               
Cow position:
               
chr25:11585300-11585641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
51, 110
               

               
Conread position:
               
13-362
               

               
Cow position:
               
chr25:1838021-1838370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
109, 58
               

               
Conread position:
               
13-372
               

               
Cow position:
               
chr25:22910064-22909724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
58, 41
               

               
Conread position:
               
13-412
               

               
Cow position:
               
chr25:19129635-19130051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
156, 125
               

               
Conread position:
               
13-417
               

               
Cow position:
               
chr25:33691335-33691728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 148
               

               
Conread position:
               
13-424
               

               
Cow position:
               
chr25:12778750-12778352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
56, 129
               

               
Conread position:
               
13-424
               

               
Cow position:
               
chr25:21191269-21191686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
67, 57
               

               
Conread position:
               
13-426
               

               
Cow position:
               
chr25:26225258-26224825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
101, 51
               

               
Conread position:
               
14-272
               

               
Cow position:
               
chr25:12239365-12239106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 183
               

               
Conread position:
               
14-282
               

               
Cow position:
               
chr25:9754301-9754045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
102, 24
               

               
Conread position:
               
14-287
               

               
Cow position:
               
chr25:17566370-17566643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
102, 59
               

               
Conread position:
               
14-287
               

               
Cow position:
               
chr25:21289123-21289402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
64, 134
               

               
Conread position:
               
14-291
               

               
Cow position:
               
chr25:41132572-41132300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
108, 63
               

               
Conread position:
               
14-312
               

               
Cow position:
               
chr25:20020204-20019926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
179, 60
               

               
Conread position:
               
14-350
               

               
Cow position:
               
chr25:7007699-7008027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
203, 50
               

               
Conread position:
               
14-412
               

               
Cow position:
               
chr25:11437019-11436627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 83
               

               
Conread position:
               
14-424
               

               
Cow position:
               
chr25:26090029-26089618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 11
               

               
Conread position:
               
16-425
               

               
Cow position:
               
chr25:34768935-34768538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
184, 67
               

               
Conread position:
               
17-174
               

               
Cow position:
               
chr25:2595964-2596128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
72, 132
               

               
Conread position:
               
17-197
               

               
Cow position:
               
chr25:12204256-12204435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
101, 71
               

               
Conread position:
               
17-287
               

               
Cow position:
               
chr25:32191455-32191716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
52, 123
               

               
Conread position:
               
17-331
               

               
Cow position:
               
chr25:36036994-36036683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 119
               

               
Conread position:
               
17-412
               

               
Cow position:
               
chr25:19679128-19679549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
54, 119
               

               
Conread position:
               
17-420
               

               
Cow position:
               
chr25:24136650-24136259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 149
               

               
Conread position:
               
18-295
               

               
Cow position:
               
chr25:7306085-7306355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
46, 125
               

               
Conread position:
               
18-420
               

               
Cow position:
               
chr25:33245720-33246099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
31, 72
               

               
Conread position:
               
18-426
               

               
Cow position:
               
chr25:27535118-27534727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 46
               

               
Conread position:
               
20-417
               

               
Cow position:
               
chr25:20076286-20076681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 68
               

               
Conread position:
               
21-288
               

               
Cow position:
               
chr25:12097632-12097897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
62, 97
               

               
Conread position:
               
21-346
               

               
Cow position:
               
chr25:20007927-20008244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
21, 11
               

               
Conread position:
               
21-426
               

               
Cow position:
               
chr25:8512305-8511900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 230
               

               
Conread position:
               
22-245
               

               
Cow position:
               
chr25:35625385-35625170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
181, 110
               

               
Conread position:
               
24-294
               

               
Cow position:
               
chr25:6977771-6978041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
47, 122
               

               
Conread position:
               
24-380
               

               
Cow position:
               
chr25:13387605-13387952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 61
               

               
Conread position:
               
27-256
               

               
Cow position:
               
chr25:26270138-26269912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
91, 112
               

               
Conread position:
               
27-265
               

               
Cow position:
               
chr25:36779288-36779535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
44, 119
               

               
Conread position:
               
27-294
               

               
Cow position:
               
chr25:16714478-16714207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
57, 66
               

               
Conread position:
               
27-346
               

               
Cow position:
               
chr25:17704545-17704855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
44, 105
               

               
Conread position:
               
27-350
               

               
Cow position:
               
chr25:18905681-18906002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
14, 38
               

               
Conread position:
               
27-354
               

               
Cow position:
               
chr25:20133520-20133197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
5, 113
               

               
Conread position:
               
28-346
               

               
Cow position:
               
chr25:22178718-22179027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
160, 110
               

               
Conread position:
               
28-355
               

               
Cow position:
               
chr25:13272366-13272689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
43, 102
               

               
Conread position:
               
29-291
               

               
Cow position:
               
chr25:17914578-17914840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
113, 87
               

               
Conread position:
               
29-355
               

               
Cow position:
               
chr25:2624603-2624914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
42, 115
               

               
Conread position:
               
30-293
               

               
Cow position:
               
chr25:27801089-27801340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
27, 54
               

               
Conread position:
               
30-294
               

               
Cow position:
               
chr25:33959465-33959190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
41, 273
               

               
Conread position:
               
36-425
               

               
Cow position:
               
chr25:12755686-12755281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
82, 31
               

               
Conread position:
               
37-387
               

               
Cow position:
               
chr25:18161097-18161434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 25
               

               
Conread position:
               
38-346
               

               
Cow position:
               
chr25:13672195-13672514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
33, 107
               

               
Conread position:
               
44-422
               

               
Cow position:
               
chr25:11315724-11316109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
101, 20
               

               
Conread position:
               
53-346
               

               
Cow position:
               
chr25:23245187-23244891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
77, 182
               

               
Conread position:
               
55-245
               

               
Cow position:
               
chr25:23323031-23323214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
59, 9
               

               
Conread position:
               
55-294
               

               
Cow position:
               
chr25:26133862-26134105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
58, 89
               

               
Conread position:
               
56-329
               

               
Cow position:
               
chr25:13472064-13471808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
58-331
               

               
Cow position:
               
chr25:17144254-17144531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
153, 25
               

               
Conread position:
               
64-411
               

               
Cow position:
               
chr25:30462466-30462125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
48, 74
               

               
Conread position:
               
65-375
               

               
Cow position:
               
chr25:26679062-26679364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
149, 75
               

               
Conread position:
               
66-269
               

               
Cow position:
               
chr25:16555597-16555804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
61, 50
               

               
Conread position:
               
66-273
               

               
Cow position:
               
chr25:15440945-15440745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
50, 74
               

               
Conread position:
               
66-294
               

               
Cow position:
               
chr25:5920773-5921006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
50, 78
               

               
Conread position:
               
66-295
               

               
Cow position:
               
chr25:17342288-17342521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
50, 78
               

               
Conread position:
               
66-348
               

               
Cow position:
               
chr25:11989679-11989401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
48, 167
               

               
Conread position:
               
66-348
               

               
Cow position:
               
chr25:33411093-33411370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
49, 72
               

               
Conread position:
               
66-349
               

               
Cow position:
               
chr25:22751177-22750892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
23, 76
               

               
Conread position:
               
66-410
               

               
Cow position:
               
chr25:24651617-24651262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
7, 77
               

               
Conread position:
               
66-416
               

               
Cow position:
               
chr25:26457845-26457495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 20
               

               
Conread position:
               
67-201
               

               
Cow position:
               
chr25:33142070-33141939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
124, 71
               

               
Conread position:
               
67-295
               

               
Cow position:
               
chr25:33786245-33786024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
140, 59
               

               
Conread position:
               
67-307
               

               
Cow position:
               
chr25:9349434-9349209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
142, 22
               

               
Conread position:
               
67-348
               

               
Cow position:
               
chr25:32606486-32606213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
125, 144
               

               
Conread position:
               
67-416
               

               
Cow position:
               
chr25:4681073-4681406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
122, 73
               

               
Conread position:
               
67-416
               

               
Cow position:
               
chr25:21893174-21893535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 32
               

               
Conread position:
               
68-294
               

               
Cow position:
               
chr25:6996619-6996846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
48, 76
               

               
Conread position:
               
70-270
               

               
Cow position:
               
chr25:8485656-8485452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
71-355
               

               
Cow position:
               
chr25:5972311-5972579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
277, 84
               

               
Conread position:
               
74-245
               

               
Cow position:
               
chr25:32588036-32587864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
42, 74
               

               
Conread position:
               
74-426
               

               
Cow position:
               
chr25:31732491-31732122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
121, 19
               

               
Conread position:
               
76-349
               

               
Cow position:
               
chr25:7380995-7380724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
25, 65
               

               
Conread position:
               
77-287
               

               
Cow position:
               
chr25:20216679-20216890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
41, 65
               

               
Conread position:
               
77-412
               

               
Cow position:
               
chr25:36501392-36501062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 138
               

               
Conread position:
               
87-369
               

               
Cow position:
               
chr25:16691519-16691790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
45, 60
               

               
Conread position:
               
90-290
               

               
Cow position:
               
chr25:22730692-22730889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
22, 50
               

               
Conread position:
               
90-346
               

               
Cow position:
               
chr25:30618925-30619174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
121, 26
               

               
Conread position:
               
93-418
               

               
Cow position:
               
chr25:33112106-33111799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
111, 93
               

               
Conread position:
               
94-413
               

               
Cow position:
               
chr25:4716138-4716435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
288, 65
               

               
Conread position:
               
95-295
               

               
Cow position:
               
chr25:9519189-9519383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
110, 24
               

               
Conread position:
               
98-336
               

               
Cow position:
               
chr25:16560310-16560073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
26, 126
               

               
Conread position:
               
99-287
               

               
Cow position:
               
chr25:7449676-7449856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
99-347
               

               
Cow position:
               
chr25:14157490-14157737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
99, 27
               

               
Conread position:
               
99-392
               

               
Cow position:
               
chr25:34379237-34378950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 26
               

               
Conread position:
               
101-287
               

               
Cow position:
               
chr25:19317128-19317321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
21, 43
               

               
Conread position:
               
105-373
               

               
Cow position:
               
chr25:33457604-33457872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
94, 35
               

               
Conread position:
               
107-255
               

               
Cow position:
               
chr25:13640260-13640405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
108-424
               

               
Cow position:
               
chr25:12932507-12932816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
281, 76
               

               
Conread position:
               
111-294
               

               
Cow position:
               
chr25:36872242-36872420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
104, 28
               

               
Conread position:
               
111-400
               

               
Cow position:
               
chr25:13560325-13560048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
92, 44
               

               
Conread position:
               
116-418
               

               
Cow position:
               
chr25:14075187-14075487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 61
               

               
Conread position:
               
121-346
               

               
Cow position:
               
chr25:36555799-36555578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
78, 20
               

               
Conread position:
               
126-379
               

               
Cow position:
               
chr25:32003329-32003061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
70, 32
               

               
Conread position:
               
139-331
               

               
Cow position:
               
chr25:13727477-13727292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
69, 12
               

               
Conread position:
               
139-406
               

               
Cow position:
               
chr25:17911389-17911633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
183, 12
               

               
Conread position:
               
141-263
               

               
Cow position:
               
chr25:107175-107051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
57, 89
               

               
Conread position:
               
141-299
               

               
Cow position:
               
chr25:13443504-13443342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
52, 85
               

               
Conread position:
               
141-328
               

               
Cow position:
               
chr25:1824186-1824004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
59, 24
               

               
Conread position:
               
141-350
               

               
Cow position:
               
chr25:23779412-23779217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
103, 18
               

               
Conread position:
               
141-383
               

               
Cow position:
               
chr25:8080632-8080873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
61, 91
               

               
Conread position:
               
141-424
               

               
Cow position:
               
chr25:33205171-33204895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 92
               

               
Conread position:
               
141-426
               

               
Cow position:
               
chr25:26240447-26240732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 81
               

               
Conread position:
               
142-345
               

               
Cow position:
               
chr25:19364150-19363949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
53, 90
               

               
Conread position:
               
142-380
               

               
Cow position:
               
chr25:13562346-13562576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
51, 89
               

               
Conread position:
               
146-354
               

               
Cow position:
               
chr25:12806958-12807157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
41, 79
               

               
Conread position:
               
147-346
               

               
Cow position:
               
chr25:36120417-36120609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
12, 55
               

               
Conread position:
               
148-374
               

               
Cow position:
               
chr25:20811455-20811235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
58, 77
               

               
Conread position:
               
165-404
               

               
Cow position:
               
chr25:23248804-23248571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
38, 12
               

               
Conread position:
               
173-413
               

               
Cow position:
               
chr25:18239448-18239690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
35, 69
               

               
Conread position:
               
196-420
               

               
Cow position:
               
chr25:18448778-18448997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
19, 34
               

               
Conread position:
               
196-426
               

               
Cow position:
               
chr25:6178000-6178226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
65, 33
               

               
Conread position:
               
200-426
               

               
Cow position:
               
chr25:13321151-13321370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
207-412
               

               
Cow position:
               
chr25:20428297-20428496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
186, 22
               

               
Conread position:
               
208-415
               

               
Cow position:
               
chr25:41094157-41093956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
181, 21
               

               
Conread position:
               
213-423
               

               
Cow position:
               
chr25:35109286-35109070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
134, 11
               

               
Conread position:
               
227-382
               

               
Cow position:
               
chr25:13799947-13800097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
227-415
               

               
Cow position:
               
chr25:5365525-5365713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
53, 66
               

               
Conread position:
               
227-419
               

               
Cow position:
               
chr25:15024908-15025093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
167, 22
               

               
Conread position:
               
245-383
               

               
Cow position:
               
chr25:20885072-20884941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
16, 47
               

               
Conread position:
               
251-422
               

               
Cow position:
               
chr25:20614745-20614911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
143, 38
               

               
Conread position:
               
252-414
               

               
Cow position:
               
chr25:26652204-26652365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
133, 39
               

               
Conread position:
               
258-404
               

               
Cow position:
               
chr25:2135232-2135083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
100, 35
               

               
Conread position:
               
259-383
               

               
Cow position:
               
chr25:18228206-18228323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
260-426
               

               
Cow position:
               
chr25:11040968-11041126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
144, 29
               

               
Conread position:
               
296-418
               

               
Cow position:
               
chr25:19524384-19524260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
98, 0
               
Show alignments to all cow chromosomes.