Cow genome map
| Conread name: | mE4-MI-P-E4-abp-f-06-1-UM.s1 |
| Conread position: | 305-557 |
| Cow position: | chr11:38334761-38334500 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 26, 57 |
| Conread position: | 308-522 |
| Cow position: | chr11:33369389-33369162 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 13, 54 |
| Conread position: | 335-521 |
| Cow position: | chr11:26143887-26144083 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 19, 119 |
| Conread position: | 335-526 |
| Cow position: | chr11:76835429-76835616 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 46, 68 |
| Conread position: | 338-527 |
| Cow position: | chr11:30638739-30638944 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 341-522 |
| Cow position: | chr11:7460426-7460603 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 54, 42 |
| Conread position: | 342-499 |
| Cow position: | chr11:84758027-84757867 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 39, 14 |
| Conread position: | 343-520 |
| Cow position: | chr11:30808393-30808580 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 143 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 25, 112 |
| Conread position: | 343-521 |
| Cow position: | chr11:43914495-43914304 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 38, 114 |
| Conread position: | 343-521 |
| Cow position: | chr11:86895577-86895389 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 15, 112 |
| Conread position: | 343-535 |
| Cow position: | chr11:7924401-7924596 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 8, 61 |
| Conread position: | 344-498 |
| Cow position: | chr11:28078690-28078529 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 37, 107 |
| Conread position: | 344-521 |
| Cow position: | chr11:26057447-26057638 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 37, 12 |
| Conread position: | 344-521 |
| Cow position: | chr11:36092717-36092904 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 344-521 |
| Cow position: | chr11:40459306-40459120 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 37, 108 |
| Conread position: | 344-521 |
| Cow position: | chr11:46747669-46747848 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 44, 60 |
| Conread position: | 344-521 |
| Cow position: | chr11:66041472-66041291 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 37, 12 |
| Conread position: | 344-522 |
| Cow position: | chr11:1485033-1485215 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 37, 63 |
| Conread position: | 344-522 |
| Cow position: | chr11:33414429-33414248 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 25, 103 |
| Conread position: | 344-524 |
| Cow position: | chr11:7651869-7652057 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 31, 45 |
| Conread position: | 344-533 |
| Cow position: | chr11:25783905-25783714 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 57, 37 |
| Conread position: | 344-533 |
| Cow position: | chr11:63435712-63435523 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 43, 102 |
| Conread position: | 344-533 |
| Cow position: | chr11:63919860-63920052 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 16, 82 |
| Conread position: | 344-552 |
| Cow position: | chr11:17517600-17517380 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 37, 187 |
| Conread position: | 345-505 |
| Cow position: | chr11:34279934-34279771 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 36, 15 |
| Conread position: | 345-521 |
| Cow position: | chr11:29659755-29659572 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 36, 15 |
| Conread position: | 345-521 |
| Cow position: | chr11:69417603-69417414 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 145 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 36, 112 |
| Conread position: | 345-534 |
| Cow position: | chr11:30797326-30797135 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 9, 50 |
| Conread position: | 345-538 |
| Cow position: | chr11:34644847-34644651 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 42, 181 |
| Conread position: | 347-521 |
| Cow position: | chr11:37804354-37804541 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 34, 110 |
| Conread position: | 347-521 |
| Cow position: | chr11:75749664-75749492 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 19, 50 |
| Conread position: | 349-521 |
| Cow position: | chr11:30708701-30708519 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 32, 109 |
| Conread position: | 349-533 |
| Cow position: | chr11:7385631-7385441 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 17, 97 |
| Conread position: | 350-521 |
| Cow position: | chr11:64781283-64781099 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 31, 110 |
| Conread position: | 351-520 |
| Cow position: | chr11:32800821-32800639 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 30, 106 |
| Conread position: | 351-528 |
| Cow position: | chr11:12555110-12555299 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 30, 107 |
| Conread position: | 351-552 |
| Cow position: | chr11:41985854-41986064 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 30, 180 |
| Conread position: | 352-521 |
| Cow position: | chr11:23220553-23220375 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 352-522 |
| Cow position: | chr11:25968660-25968843 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 29, 105 |
| Conread position: | 353-509 |
| Cow position: | chr11:17369718-17369555 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 28, 99 |
| Conread position: | 354-521 |
| Cow position: | chr11:13500190-13500028 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 132, 30 |
| Conread position: | 354-547 |
| Cow position: | chr11:77241892-77241695 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 27, 7 |
| Conread position: | 354-551 |
| Cow position: | chr11:19578830-19579032 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 12, 97 |
| Conread position: | 356-514 |
| Cow position: | chr11:46010070-46010234 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 25, 95 |
| Conread position: | 356-520 |
| Cow position: | chr11:49153129-49152963 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 25, 51 |
| Conread position: | 356-521 |
| Cow position: | chr11:1980076-1980255 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 356-521 |
| Cow position: | chr11:13940376-13940198 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 356-521 |
| Cow position: | chr11:35536764-35536600 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 25, 77 |
| Conread position: | 356-526 |
| Cow position: | chr11:77013958-77013788 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 25, 11 |
| Conread position: | 356-533 |
| Cow position: | chr11:46499180-46499010 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 26, 51 |
| Conread position: | 356-549 |
| Cow position: | chr11:41213241-41213036 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 25, 181 |
| Conread position: | 356-551 |
| Cow position: | chr11:29482252-29482455 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 25, 94 |
| Conread position: | 356-552 |
| Cow position: | chr11:39462808-39462605 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 25, 95 |
| Conread position: | 356-554 |
| Cow position: | chr11:25620201-25620408 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 26, 80 |
| Conread position: | 357-521 |
| Cow position: | chr11:18791894-18792055 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 80, 21 |
| Conread position: | 357-533 |
| Cow position: | chr11:80586455-80586276 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 7, 18 |
| Conread position: | 360-529 |
| Cow position: | chr11:36300399-36300577 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 21, 94 |
| Conread position: | 360-533 |
| Cow position: | chr11:77758576-77758759 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 21, 96 |
| Conread position: | 360-537 |
| Cow position: | chr11:5218978-5219164 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 18, 93 |
| Conread position: | 361-512 |
| Cow position: | chr11:50629454-50629298 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 45, 89 |
| Conread position: | 361-512 |
| Cow position: | chr11:67208433-67208274 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 20, 94 |
| Conread position: | 361-515 |
| Cow position: | chr11:41278371-41278204 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 21, 97 |
| Conread position: | 361-515 |
| Cow position: | chr11:42016455-42016621 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 34, 96 |
| Conread position: | 361-520 |
| Cow position: | chr11:30322310-30322479 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 20, 87 |
| Conread position: | 361-520 |
| Cow position: | chr11:79666078-79666248 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 134 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 20, 95 |
| Conread position: | 361-521 |
| Cow position: | chr11:15366794-15366960 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 20, 89 |
| Conread position: | 361-521 |
| Cow position: | chr11:38223609-38223775 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 20, 90 |
| Conread position: | 361-521 |
| Cow position: | chr11:49396342-49396513 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 361-521 |
| Cow position: | chr11:76369346-76369510 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 21, 96 |
| Conread position: | 361-521 |
| Cow position: | chr11:81614340-81614501 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 20, 84 |
| Conread position: | 361-522 |
| Cow position: | chr11:37565053-37564885 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 20, 91 |
| Conread position: | 361-526 |
| Cow position: | chr11:36112593-36112427 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 20, 33 |
| Conread position: | 361-533 |
| Cow position: | chr11:19591812-19591993 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 21, 94 |
| Conread position: | 361-535 |
| Cow position: | chr11:31901355-31901186 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 21, 67 |
| Conread position: | 361-535 |
| Cow position: | chr11:46314197-46314009 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 20, 98 |
| Conread position: | 361-538 |
| Cow position: | chr11:27907954-27907773 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 20, 91 |
| Conread position: | 361-547 |
| Cow position: | chr11:63498947-63499143 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 20, 180 |
| Conread position: | 361-561 |
| Cow position: | chr11:49149230-49149020 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 20, 175 |
| Conread position: | 362-515 |
| Cow position: | chr11:37335921-37336071 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 19, 45 |
| Conread position: | 362-515 |
| Cow position: | chr11:83028175-83028012 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 19, 93 |
| Conread position: | 362-521 |
| Cow position: | chr11:15772530-15772701 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 19, 85 |
| Conread position: | 362-521 |
| Cow position: | chr11:18119685-18119514 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 19, 95 |
| Conread position: | 362-521 |
| Cow position: | chr11:35669783-35669939 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 19, 32 |
| Conread position: | 362-521 |
| Cow position: | chr11:41215916-41215745 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 19, 95 |
| Conread position: | 362-521 |
| Cow position: | chr11:68570198-68570368 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 19, 45 |
| Conread position: | 362-526 |
| Cow position: | chr11:15526290-15526117 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 19, 87 |
| Conread position: | 362-532 |
| Cow position: | chr11:78380886-78381065 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 20, 90 |
| Conread position: | 362-535 |
| Cow position: | chr11:37099989-37100176 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 19, 94 |
| Conread position: | 362-555 |
| Cow position: | chr11:38236428-38236230 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 19, 88 |
| Conread position: | 362-576 |
| Cow position: | chr11:15999830-15999614 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 21, 11 |
| Conread position: | 363-511 |
| Cow position: | chr11:44176775-44176618 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 18, 81 |
| Conread position: | 363-521 |
| Cow position: | chr11:30192360-30192191 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 363-521 |
| Cow position: | chr11:42084491-42084663 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 18, 96 |
| Conread position: | 364-521 |
| Cow position: | chr11:26442333-26442492 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 23, 83 |
| Conread position: | 365-524 |
| Cow position: | chr11:19247025-19247190 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 20, 86 |
| Conread position: | 366-522 |
| Cow position: | chr11:63485111-63484949 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 15, 41 |
| Conread position: | 370-521 |
| Cow position: | chr11:32436502-32436347 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 370-555 |
| Cow position: | chr11:13042973-13043167 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 11, 37 |
| Conread position: | 376-529 |
| Cow position: | chr11:39854853-39855013 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 5, 78 |
| Conread position: | 393-508 |
| Cow position: | chr11:80596478-80596363 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 93, 51 |
| Conread position: | 401-513 |
| Cow position: | chr11:43641519-43641407 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 91 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 85, 44 |
| Conread position: | 401-515 |
| Cow position: | chr11:71868472-71868584 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 94 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 85, 10 |
| Conread position: | 401-515 |
| Cow position: | chr11:76896242-76896356 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 93 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 85, 34 |
| Conread position: | 401-516 |
| Cow position: | chr11:37435856-37435970 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 85, 27 |
| Conread position: | 401-520 |
| Cow position: | chr11:21173306-21173424 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 85, 16 |
| Conread position: | 401-520 |
| Cow position: | chr11:70458175-70458055 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 96 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 85, 51 |
| Conread position: | 401-521 |
| Cow position: | chr11:1067307-1067427 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 95 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 84, 43 |
| Conread position: | 401-521 |
| Cow position: | chr11:6320000-6320120 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 85, 43 |
| Conread position: | 401-521 |
| Cow position: | chr11:17807830-17807950 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 96 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 85, 44 |
| Conread position: | 401-521 |
| Cow position: | chr11:18508898-18509018 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 85, 43 |
| Conread position: | 401-521 |
| Cow position: | chr11:34136372-34136253 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 102 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 85, 13 |
| Conread position: | 401-521 |
| Cow position: | chr11:34968482-34968601 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 85, 38 |
| Conread position: | 401-521 |
| Cow position: | chr11:46884506-46884386 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 98 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 85, 43 |
| Conread position: | 401-521 |
| Cow position: | chr11:62889761-62889881 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 101 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 85, 43 |
| Conread position: | 401-521 |
| Cow position: | chr11:66939460-66939580 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 85, 44 |
| Conread position: | 401-521 |
| Cow position: | chr11:84385506-84385626 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 96 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 85, 43 |
| Conread position: | 401-522 |
| Cow position: | chr11:55117577-55117456 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 83, 43 |
| Conread position: | 401-522 |
| Cow position: | chr11:63407826-63407707 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 85, 44 |
| Conread position: | 401-526 |
| Cow position: | chr11:19549610-19549488 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 85, 37 |
| Conread position: | 401-526 |
| Cow position: | chr11:35926777-35926901 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 85, 43 |
| Conread position: | 401-526 |
| Cow position: | chr11:53510370-53510496 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 85, 38 |
| Conread position: | 401-527 |
| Cow position: | chr11:2835991-2835864 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 84, 43 |
| Conread position: | 401-533 |
| Cow position: | chr11:50472449-50472318 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 85, 44 |
| Conread position: | 401-535 |
| Cow position: | chr11:36920443-36920578 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 84, 31 |
| Conread position: | 401-538 |
| Cow position: | chr11:35140041-35139903 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 85, 47 |
| Conread position: | 401-542 |
| Cow position: | chr11:70600696-70600836 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 85, 43 |
| Conread position: | 401-544 |
| Cow position: | chr11:60720323-60720464 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 85, 43 |
| Conread position: | 401-555 |
| Cow position: | chr11:35109406-35109559 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 85, 43 |
| Conread position: | 402-515 |
| Cow position: | chr11:53816985-53816871 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 402-521 |
| Cow position: | chr11:8683948-8684067 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 84, 37 |
| Conread position: | 402-521 |
| Cow position: | chr11:13592869-13592748 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 31, 44 |
| Conread position: | 403-520 |
| Cow position: | chr11:60486286-60486405 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 21, 43 |
| Conread position: | 403-525 |
| Cow position: | chr11:30209692-30209815 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 83, 41 |
| Conread position: | 404-522 |
| Cow position: | chr11:46452269-46452147 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 404-526 |
| Cow position: | chr11:3714950-3714829 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 82, 41 |
| Conread position: | 415-519 |
| Cow position: | chr11:81605976-81605872 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 87 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 71, 30 |
| Conread position: | 415-522 |
| Cow position: | chr11:34623289-34623182 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 94 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 70, 29 |
| Conread position: | 415-535 |
| Cow position: | chr11:78780740-78780861 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 71, 29 |
| Conread position: | 415-552 |
| Cow position: | chr11:37982459-37982598 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 71, 29 |
| Conread position: | 416-521 |
| Cow position: | chr11:62168214-62168318 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 70, 28 |
| Conread position: | 429-526 |
| Cow position: | chr11:1142733-1142830 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 84 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 57, 15 |
Show alignments to all cow chromosomes.