Cow genome map

Conread name: mE4-MI-P-E4-abp-f-06-1-UM.s1

Conread position: 330-561
Cow position: chr15:35641869-35642111 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 174
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 13, 130

Conread position: 342-540
Cow position: chr15:40562573-40562374 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 142
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 20, 61

Conread position: 343-521
Cow position: chr15:20487328-20487144 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 38, 17

Conread position: 344-508
Cow position: chr15:41049585-41049416 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 51, 62

Conread position: 344-521
Cow position: chr15:20370580-20370396 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 134
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 42, 107

Conread position: 344-521
Cow position: chr15:23798649-23798471 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 37, 12

Conread position: 344-521
Cow position: chr15:36388171-36388350 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 141
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 37, 44

Conread position: 344-522
Cow position: chr15:18449872-18450058 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 37, 96

Conread position: 344-532
Cow position: chr15:20422894-20422706 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 148
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 9, 62

Conread position: 344-554
Cow position: chr15:27900633-27900419 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 169
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 37, 105

Conread position: 345-518
Cow position: chr15:6332587-6332411 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 140
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 36, 15

Conread position: 345-533
Cow position: chr15:35577066-35577273 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 149
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 350-522
Cow position: chr15:51211175-51211349 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 31, 58

Conread position: 350-546
Cow position: chr15:45574750-45574553 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 31, 66

Conread position: 351-516
Cow position: chr15:6129075-6128912 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 130
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 31, 56

Conread position: 351-521
Cow position: chr15:14880453-14880284 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 30, 56

Conread position: 352-524
Cow position: chr15:18941914-18942092 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 140
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 29, 55

Conread position: 352-526
Cow position: chr15:22444107-22443920 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 144
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 30, 105

Conread position: 352-532
Cow position: chr15:20566008-20566203 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 148
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 29, 106

Conread position: 354-515
Cow position: chr15:36643964-36643796 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 24, 52

Conread position: 354-555
Cow position: chr15:31495336-31495130 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 148
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 27, 96

Conread position: 355-534
Cow position: chr15:26912184-26911998 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 144
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 26, 11

Conread position: 356-521
Cow position: chr15:5409010-5408838 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 134
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 25, 95

Conread position: 356-521
Cow position: chr15:6037563-6037396 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 120
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 12, 161

Conread position: 356-521
Cow position: chr15:24031090-24031259 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 34, 24

Conread position: 356-521
Cow position: chr15:26919385-26919216 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 25, 68

Conread position: 356-521
Cow position: chr15:41321068-41320894 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 25, 96

Conread position: 356-522
Cow position: chr15:6227292-6227122 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 26, 37

Conread position: 356-533
Cow position: chr15:34284523-34284340 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 39, 23

Conread position: 356-533
Cow position: chr15:44119585-44119396 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 144
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 25, 103

Conread position: 356-534
Cow position: chr15:5235104-5234923 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 39, 17

Conread position: 356-534
Cow position: chr15:19554042-19553853 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 151
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 25, 101

Conread position: 356-554
Cow position: chr15:43634146-43633938 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 156
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 25, 100

Conread position: 356-555
Cow position: chr15:21822043-21821831 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 155
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 25, 101

Conread position: 356-560
Cow position: chr15:18704049-18703833 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 153
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 357-532
Cow position: chr15:43114835-43114653 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 143
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 14, 156

Conread position: 358-526
Cow position: chr15:29810011-29810187 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 23, 49

Conread position: 360-521
Cow position: chr15:16230117-16230281 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 120
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 21, 60

Conread position: 361-515
Cow position: chr15:1857615-1857777 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 20, 92

Conread position: 361-515
Cow position: chr15:6905428-6905586 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 20, 81

Conread position: 361-515
Cow position: chr15:40562794-40562629 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 129
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 20, 88

Conread position: 361-521
Cow position: chr15:8715293-8715123 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 20, 88

Conread position: 361-521
Cow position: chr15:13846676-13846509 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 130
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 26, 46

Conread position: 361-521
Cow position: chr15:17124582-17124409 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 139
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 20, 99

Conread position: 361-521
Cow position: chr15:25366176-25366004 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 20, 143

Conread position: 361-521
Cow position: chr15:43674057-43673885 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 20, 0

Conread position: 361-521
Cow position: chr15:46364663-46364831 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 20, 93

Conread position: 361-524
Cow position: chr15:38420666-38420490 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 24, 97

Conread position: 361-525
Cow position: chr15:19771026-19771199 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 20, 0

Conread position: 361-526
Cow position: chr15:17621432-17621254 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 20, 108

Conread position: 361-532
Cow position: chr15:41528077-41527900 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 140
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 20, 75

Conread position: 361-533
Cow position: chr15:9978992-9979170 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 136
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 20, 92

Conread position: 361-533
Cow position: chr15:15154188-15154370 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 139
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 20, 95

Conread position: 361-533
Cow position: chr15:40798529-40798343 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 138
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 361-535
Cow position: chr15:4334021-4333844 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 143
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 34, 93

Conread position: 361-537
Cow position: chr15:20906140-20905953 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 24, 91

Conread position: 361-538
Cow position: chr15:21710220-21710031 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 144
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 34, 96

Conread position: 361-539
Cow position: chr15:19950375-19950555 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 20, 86

Conread position: 361-552
Cow position: chr15:17084095-17084297 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 150
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 20, 96

Conread position: 361-555
Cow position: chr15:42380817-42381021 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 148
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 20, 94

Conread position: 362-515
Cow position: chr15:48095246-48095417 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 134
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 19, 97

Conread position: 362-521
Cow position: chr15:36435092-36435264 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 20, 96

Conread position: 362-521
Cow position: chr15:44089275-44089104 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 135
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 20, 96

Conread position: 362-526
Cow position: chr15:38861988-38862161 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 19, 0

Conread position: 362-533
Cow position: chr15:17233076-17233263 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 143
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 19, 177

Conread position: 363-521
Cow position: chr15:48052707-48052545 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 128
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 18, 30

Conread position: 363-526
Cow position: chr15:32324317-32324140 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 136
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 18, 94

Conread position: 366-526
Cow position: chr15:37381523-37381692 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 366-533
Cow position: chr15:12913605-12913423 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 142
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 15, 89

Conread position: 368-521
Cow position: chr15:22751120-22751271 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 13, 49

Conread position: 368-526
Cow position: chr15:12785336-12785499 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 118, 77

Conread position: 370-525
Cow position: chr15:44402035-44401886 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 116, 8

Conread position: 400-522
Cow position: chr15:14760699-14760580 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 86, 44

Conread position: 401-504
Cow position: chr15:38228077-38228179 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 85, 37

Conread position: 401-512
Cow position: chr15:36391613-36391724 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 85, 43

Conread position: 401-520
Cow position: chr15:20534511-20534392 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 85, 43

Conread position: 401-520
Cow position: chr15:29927906-29928024 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 93
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 401-521
Cow position: chr15:9465616-9465736 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 85, 43

Conread position: 401-521
Cow position: chr15:16415236-16415356 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 85, 46

Conread position: 401-521
Cow position: chr15:20856537-20856417 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 85, 37

Conread position: 401-521
Cow position: chr15:23572747-23572627 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 85, 38

Conread position: 401-521
Cow position: chr15:28924816-28924696 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 31, 18

Conread position: 401-522
Cow position: chr15:38652661-38652541 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 84, 44

Conread position: 401-526
Cow position: chr15:4138076-4138200 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 85, 25

Conread position: 401-533
Cow position: chr15:12045599-12045467 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 50, 44

Conread position: 401-534
Cow position: chr15:26617877-26618012 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 85, 0

Conread position: 401-535
Cow position: chr15:16667556-16667424 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 85, 43

Conread position: 401-548
Cow position: chr15:16657412-16657559 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 118
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 85, 44

Conread position: 401-555
Cow position: chr15:17196087-17196241 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 85, 44

Conread position: 401-555
Cow position: chr15:20459369-20459213 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 124
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 85, 43

Conread position: 401-555
Cow position: chr15:43626407-43626562 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 113
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 85, 124

Conread position: 402-521
Cow position: chr15:36793554-36793435 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 84, 36

Conread position: 403-521
Cow position: chr15:16644845-16644727 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 100
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 83, 41

Conread position: 403-521
Cow position: chr15:41624953-41624835 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 83, 41

Conread position: 406-521
Cow position: chr15:18437952-18438067 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 80, 38

Conread position: 415-519
Cow position: chr15:39316891-39316785 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 415-521
Cow position: chr15:33976742-33976636 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 90
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 71, 29

Conread position: 415-521
Cow position: chr15:39621291-39621397 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 90
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 71, 29

Show alignments to all cow chromosomes.