Cow genome map

Conread name: mE4-MI-P-E4-abp-f-06-1-UM.s1

Conread position: 302-550
Cow position: chr17:6761552-6761805 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 175
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 29, 150

Conread position: 307-521
Cow position: chr17:20992758-20992971 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 154
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 25, 17

Conread position: 333-521
Cow position: chr17:18708347-18708540 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 142
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 31, 9

Conread position: 334-521
Cow position: chr17:11055902-11056089 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 150
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 47, 22

Conread position: 335-523
Cow position: chr17:26849504-26849701 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 47, 21

Conread position: 339-522
Cow position: chr17:26072495-26072691 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 149
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 27, 35

Conread position: 342-521
Cow position: chr17:35541910-35542099 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 135
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 343-520
Cow position: chr17:6766998-6767189 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 146
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 38, 116

Conread position: 343-521
Cow position: chr17:40673633-40673441 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 147
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 23, 118

Conread position: 344-521
Cow position: chr17:11839982-11839793 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 145
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 9, 154

Conread position: 344-521
Cow position: chr17:11920904-11921094 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 148
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 37, 114

Conread position: 344-521
Cow position: chr17:14004080-14003896 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 140
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 37, 11

Conread position: 344-521
Cow position: chr17:20359363-20359183 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 129
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 43, 0

Conread position: 344-533
Cow position: chr17:25930291-25930479 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 141
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 37, 54

Conread position: 345-520
Cow position: chr17:22128176-22127994 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 144
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 36, 11

Conread position: 347-521
Cow position: chr17:20092872-20093055 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 134
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 15, 109

Conread position: 350-521
Cow position: chr17:20884777-20884594 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 141
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 31, 106

Conread position: 350-522
Cow position: chr17:11618840-11618654 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 141
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 16, 112

Conread position: 351-521
Cow position: chr17:4105740-4105923 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 351-521
Cow position: chr17:17180296-17180114 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 133
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 30, 105

Conread position: 351-521
Cow position: chr17:29472708-29472537 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 15, 5

Conread position: 352-521
Cow position: chr17:1469616-1469450 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 29, 54

Conread position: 352-521
Cow position: chr17:36178800-36178971 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 29, 135

Conread position: 352-533
Cow position: chr17:18720202-18720387 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 29, 99

Conread position: 352-533
Cow position: chr17:24077637-24077463 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 31, 42

Conread position: 354-520
Cow position: chr17:2810863-2810704 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 130
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 132, 13

Conread position: 354-525
Cow position: chr17:21677913-21678091 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 16, 97

Conread position: 355-526
Cow position: chr17:32349310-32349133 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 127
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 355-533
Cow position: chr17:3364836-3364649 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 146
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 27, 85

Conread position: 356-498
Cow position: chr17:18673791-18673946 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 123
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 25, 101

Conread position: 356-506
Cow position: chr17:7865071-7864910 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 25, 99

Conread position: 356-521
Cow position: chr17:15684749-15684581 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 26, 66

Conread position: 356-521
Cow position: chr17:43323296-43323474 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 25, 102

Conread position: 356-533
Cow position: chr17:12289164-12289349 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 143
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 25, 41

Conread position: 360-521
Cow position: chr17:20913350-20913181 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 360-521
Cow position: chr17:28795738-28795912 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 21, 98

Conread position: 361-507
Cow position: chr17:243362-243217 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 20, 46

Conread position: 361-519
Cow position: chr17:36467947-36468118 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 21, 0

Conread position: 361-520
Cow position: chr17:14652543-14652708 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 127
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 20, 0

Conread position: 361-520
Cow position: chr17:30108671-30108511 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 21, 89

Conread position: 361-520
Cow position: chr17:36814606-36814433 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 136
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 20, 0

Conread position: 361-521
Cow position: chr17:8723200-8723363 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 20, 86

Conread position: 361-521
Cow position: chr17:18818803-18818638 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 20, 46

Conread position: 361-521
Cow position: chr17:20234437-20234282 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 127
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 20, 36

Conread position: 361-521
Cow position: chr17:22189672-22189506 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 130
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 21, 46

Conread position: 361-521
Cow position: chr17:24841938-24841766 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 133
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 20, 96

Conread position: 361-521
Cow position: chr17:39964119-39963948 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 136
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 20, 97

Conread position: 361-524
Cow position: chr17:30168996-30169164 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 20, 78

Conread position: 361-529
Cow position: chr17:24987443-24987269 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 20, 149

Conread position: 361-532
Cow position: chr17:41380276-41380450 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 20, 33

Conread position: 361-533
Cow position: chr17:21489393-21489567 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 20, 45

Conread position: 361-539
Cow position: chr17:15883916-15883724 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 147
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 20, 175

Conread position: 361-549
Cow position: chr17:34948878-34948677 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 147
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 21, 96

Conread position: 361-555
Cow position: chr17:21806208-21806416 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 151
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 20, 96

Conread position: 362-502
Cow position: chr17:31985709-31985851 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 19, 75

Conread position: 362-515
Cow position: chr17:41009512-41009349 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 19, 93

Conread position: 362-520
Cow position: chr17:20929484-20929313 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 20, 95

Conread position: 362-521
Cow position: chr17:5038815-5038980 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 19, 0

Conread position: 362-521
Cow position: chr17:21039796-21039628 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 362-521
Cow position: chr17:32332852-32333020 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 19, 77

Conread position: 362-521
Cow position: chr17:32978697-32978862 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 127
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 19, 89

Conread position: 362-571
Cow position: chr17:24030000-24030217 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 158
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 19, 75

Conread position: 364-521
Cow position: chr17:6787178-6787007 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 17, 88

Conread position: 368-521
Cow position: chr17:6317873-6318032 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 13, 81

Conread position: 368-521
Cow position: chr17:10414727-10414569 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 13, 81

Conread position: 371-521
Cow position: chr17:4685786-4685630 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 10, 0

Conread position: 374-545
Cow position: chr17:26789643-26789463 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 135
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 7, 76

Conread position: 376-534
Cow position: chr17:24862681-24862517 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 5, 74

Conread position: 401-520
Cow position: chr17:1463140-1463259 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 83, 43

Conread position: 401-521
Cow position: chr17:1035406-1035526 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 85, 44

Conread position: 401-521
Cow position: chr17:1081396-1081275 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 51, 44

Conread position: 401-521
Cow position: chr17:1492958-1493078 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 85, 44

Conread position: 401-521
Cow position: chr17:3387907-3387788 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 85, 38

Conread position: 401-521
Cow position: chr17:7802984-7803104 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 85, 44

Conread position: 401-521
Cow position: chr17:15355122-15355002 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 85, 44

Conread position: 401-521
Cow position: chr17:17222532-17222411 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 85, 0

Conread position: 401-521
Cow position: chr17:21236713-21236593 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 85, 43

Conread position: 401-521
Cow position: chr17:25095674-25095552 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 77, 44

Conread position: 401-521
Cow position: chr17:26183535-26183415 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 101
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 85, 43

Conread position: 401-522
Cow position: chr17:31754584-31754705 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 23, 44

Conread position: 401-524
Cow position: chr17:25584432-25584309 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 85, 43

Conread position: 401-525
Cow position: chr17:5048121-5047997 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 104
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 85, 43

Conread position: 401-525
Cow position: chr17:28529044-28528920 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 85, 43

Conread position: 401-528
Cow position: chr17:6004988-6004862 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 85, 23

Conread position: 401-532
Cow position: chr17:25702792-25702660 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 85, 44

Conread position: 401-533
Cow position: chr17:7571294-7571163 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 85, 37

Conread position: 401-533
Cow position: chr17:14025719-14025849 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 110
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 84, 43

Conread position: 401-533
Cow position: chr17:15303785-15303918 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 102
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 83, 44

Conread position: 401-535
Cow position: chr17:25467173-25467038 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 109
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 84, 43

Conread position: 401-542
Cow position: chr17:21777916-21777775 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 122, 43

Conread position: 401-542
Cow position: chr17:27795843-27795705 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 85, 37

Conread position: 401-551
Cow position: chr17:1466226-1466375 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 85, 38

Conread position: 401-555
Cow position: chr17:5012029-5011874 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 85, 43

Conread position: 401-558
Cow position: chr17:5898336-5898494 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 85, 44

Conread position: 402-521
Cow position: chr17:13414178-13414297 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 84, 42

Conread position: 402-521
Cow position: chr17:40355448-40355329 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 101
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 84, 42

Conread position: 403-521
Cow position: chr17:43957849-43957731 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 100
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 83, 41

Conread position: 403-535
Cow position: chr17:10803064-10802932 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 83, 13

Conread position: 403-555
Cow position: chr17:5012886-5013039 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 74, 41

Conread position: 415-533
Cow position: chr17:25193350-25193467 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 71, 29

Conread position: 415-534
Cow position: chr17:26231131-26231013 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 71, 29

Conread position: 422-522
Cow position: chr17:42346849-42346949 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 64, 22

Conread position: 430-521
Cow position: chr17:34836333-34836242 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 81
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 56, 14

Show alignments to all cow chromosomes.