Cow genome map

Conread name: mE4-MI-P-E4-abp-f-06-1-UM.s1

Conread position: 308-515
Cow position: chr20:13876421-13876634 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 154
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 42, 16

Conread position: 325-535
Cow position: chr20:23590474-23590691 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 155
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 56, 34

Conread position: 327-491
Cow position: chr20:29755058-29754879 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 139
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 12, 128

Conread position: 331-500
Cow position: chr20:4944971-4945160 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 146
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 10, 128

Conread position: 339-512
Cow position: chr20:8679398-8679581 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 141
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 42, 17

Conread position: 341-521
Cow position: chr20:7934541-7934356 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 135
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 40, 174

Conread position: 342-521
Cow position: chr20:39016607-39016799 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 140
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 39, 115

Conread position: 343-521
Cow position: chr20:20967575-20967394 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 149
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 52, 32

Conread position: 344-521
Cow position: chr20:10200611-10200419 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 147
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 9, 115

Conread position: 344-521
Cow position: chr20:12782772-12782952 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 129
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 45, 103

Conread position: 344-521
Cow position: chr20:37358120-37357929 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 147
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 22, 108

Conread position: 344-528
Cow position: chr20:1824371-1824561 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 142
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 37, 187

Conread position: 344-529
Cow position: chr20:5365188-5364991 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 149
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 51, 112

Conread position: 344-533
Cow position: chr20:3141835-3141636 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 151
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 37, 107

Conread position: 344-533
Cow position: chr20:14283184-14282980 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 156
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 22, 114

Conread position: 344-555
Cow position: chr20:6054246-6054470 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 171
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 9, 113

Conread position: 344-555
Cow position: chr20:24712101-24711879 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 165
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 9, 110

Conread position: 344-556
Cow position: chr20:17251980-17251756 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 167
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 9, 95

Conread position: 345-542
Cow position: chr20:8442202-8442405 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 144
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 19, 98

Conread position: 348-547
Cow position: chr20:27340569-27340362 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 142
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 349-526
Cow position: chr20:11499261-11499076 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 146
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 18, 95

Conread position: 351-522
Cow position: chr20:30744468-30744649 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 136
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 30, 95

Conread position: 352-521
Cow position: chr20:34097696-34097880 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 146
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 29, 107

Conread position: 356-500
Cow position: chr20:35605451-35605301 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 25, 94

Conread position: 356-521
Cow position: chr20:2316179-2316352 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 356-521
Cow position: chr20:19201782-19201604 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 142
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 25, 96

Conread position: 356-521
Cow position: chr20:28935394-28935566 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 25, 102

Conread position: 356-528
Cow position: chr20:14755595-14755773 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 140
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 26, 96

Conread position: 356-529
Cow position: chr20:2798747-2798927 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 141
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 25, 95

Conread position: 356-533
Cow position: chr20:6473983-6473793 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 142
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 25, 102

Conread position: 356-538
Cow position: chr20:11359391-11359577 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 25, 37

Conread position: 357-521
Cow position: chr20:19834584-19834757 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 357-542
Cow position: chr20:11548481-11548673 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 141
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 24, 94

Conread position: 358-527
Cow position: chr20:38934820-38934989 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 124
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 24, 55

Conread position: 361-502
Cow position: chr20:36741705-36741555 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 120
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 23, 83

Conread position: 361-510
Cow position: chr20:41313623-41313471 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 20, 118

Conread position: 361-520
Cow position: chr20:3035582-3035407 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 20, 0

Conread position: 361-521
Cow position: chr20:5950397-5950570 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 20, 90

Conread position: 361-521
Cow position: chr20:34202885-34202708 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 137
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 20, 103

Conread position: 361-526
Cow position: chr20:12534505-12534677 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 17, 55

Conread position: 361-526
Cow position: chr20:14490485-14490314 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 34, 90

Conread position: 361-528
Cow position: chr20:20099359-20099533 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 20, 169

Conread position: 361-531
Cow position: chr20:35310573-35310385 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 362-506
Cow position: chr20:11661086-11661235 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 19, 87

Conread position: 363-521
Cow position: chr20:5703713-5703544 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 18, 91

Conread position: 363-521
Cow position: chr20:14917512-14917358 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 18, 44

Conread position: 365-526
Cow position: chr20:27315215-27315046 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 16, 0

Conread position: 377-521
Cow position: chr20:20459801-20459665 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 12, 0

Conread position: 377-527
Cow position: chr20:13829472-13829327 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 119
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 64, 12

Conread position: 400-516
Cow position: chr20:30639587-30639705 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 401-516
Cow position: chr20:17524465-17524353 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 85, 38

Conread position: 401-517
Cow position: chr20:16291881-16291765 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 85, 38

Conread position: 401-518
Cow position: chr20:5814759-5814642 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 77, 38

Conread position: 401-520
Cow position: chr20:2742944-2743063 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 30, 38

Conread position: 401-520
Cow position: chr20:22959155-22959273 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 102
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 43, 0

Conread position: 401-521
Cow position: chr20:297814-297934 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 85, 114

Conread position: 401-521
Cow position: chr20:11008363-11008243 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 85, 43

Conread position: 401-521
Cow position: chr20:17544817-17544697 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 85, 43

Conread position: 401-521
Cow position: chr20:25474746-25474626 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 30, 58

Conread position: 401-521
Cow position: chr20:34083911-34083788 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 48, 60

Conread position: 401-522
Cow position: chr20:35741961-35741840 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 85, 49

Conread position: 401-526
Cow position: chr20:354708-354833 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 104
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 85, 43

Conread position: 401-533
Cow position: chr20:24883170-24883303 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 34, 45

Conread position: 401-542
Cow position: chr20:27323459-27323318 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 85, 44

Conread position: 411-515
Cow position: chr20:26680385-26680281 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 75, 34

Conread position: 415-532
Cow position: chr20:9537311-9537195 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 71, 29

Show alignments to all cow chromosomes.