Cow genome map
| Conread name: | mE4-MI-P-E4-abp-f-06-1-UM.s1 |
| Conread position: | 306-532 |
| Cow position: | chr24:21606443-21606684 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 26, 153 |
| Conread position: | 313-508 |
| Cow position: | chr24:27719305-27719508 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 24, 139 |
| Conread position: | 317-521 |
| Cow position: | chr24:5152747-5152529 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 51, 12 |
| Conread position: | 321-521 |
| Cow position: | chr24:34742965-34742759 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 47, 11 |
| Conread position: | 340-515 |
| Cow position: | chr24:10309835-10309652 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 342-526 |
| Cow position: | chr24:31383303-31383117 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 39, 80 |
| Conread position: | 344-506 |
| Cow position: | chr24:16303491-16303656 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 37, 49 |
| Conread position: | 344-522 |
| Cow position: | chr24:40055319-40055506 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 37, 113 |
| Conread position: | 344-542 |
| Cow position: | chr24:6007988-6008185 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 145 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 34, 57 |
| Conread position: | 344-566 |
| Cow position: | chr24:13114938-13114716 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 9, 70 |
| Conread position: | 345-521 |
| Cow position: | chr24:29587192-29587006 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 35, 106 |
| Conread position: | 351-521 |
| Cow position: | chr24:15557157-15557336 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 15, 102 |
| Conread position: | 351-521 |
| Cow position: | chr24:17689425-17689605 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 30, 120 |
| Conread position: | 351-521 |
| Cow position: | chr24:36554515-36554692 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 32, 56 |
| Conread position: | 351-521 |
| Cow position: | chr24:39910846-39911027 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 30, 5 |
| Conread position: | 352-502 |
| Cow position: | chr24:27791559-27791710 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 29, 68 |
| Conread position: | 352-521 |
| Cow position: | chr24:17308956-17309131 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 29, 55 |
| Conread position: | 352-526 |
| Cow position: | chr24:17104387-17104568 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 29, 91 |
| Conread position: | 354-521 |
| Cow position: | chr24:6677818-6677652 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 27, 53 |
| Conread position: | 354-521 |
| Cow position: | chr24:32978992-32979162 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 28, 57 |
| Conread position: | 356-492 |
| Cow position: | chr24:30483763-30483906 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 25, 95 |
| Conread position: | 356-512 |
| Cow position: | chr24:11035331-11035491 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 25, 96 |
| Conread position: | 356-516 |
| Cow position: | chr24:26588401-26588231 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 356-521 |
| Cow position: | chr24:18750891-18750713 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 25, 104 |
| Conread position: | 356-526 |
| Cow position: | chr24:19187113-19186937 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 25, 94 |
| Conread position: | 356-526 |
| Cow position: | chr24:34390453-34390278 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 12, 90 |
| Conread position: | 361-512 |
| Cow position: | chr24:6102999-6102842 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 34, 17 |
| Conread position: | 361-515 |
| Cow position: | chr24:19801015-19800859 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 21, 90 |
| Conread position: | 361-515 |
| Cow position: | chr24:38006536-38006707 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 361-516 |
| Cow position: | chr24:37252333-37252168 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 361-521 |
| Cow position: | chr24:390276-390109 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 20, 91 |
| Conread position: | 361-521 |
| Cow position: | chr24:2402201-2402362 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 20, 72 |
| Conread position: | 361-521 |
| Cow position: | chr24:16510147-16509983 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 34, 87 |
| Conread position: | 361-521 |
| Cow position: | chr24:25947683-25947856 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 24, 96 |
| Conread position: | 361-521 |
| Cow position: | chr24:27066406-27066236 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 20, 96 |
| Conread position: | 361-521 |
| Cow position: | chr24:27906614-27906444 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 20, 88 |
| Conread position: | 361-521 |
| Cow position: | chr24:28722053-28721894 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 20, 46 |
| Conread position: | 361-521 |
| Cow position: | chr24:32890870-32891038 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 361-521 |
| Cow position: | chr24:34272995-34272816 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 361-522 |
| Cow position: | chr24:27149558-27149388 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 20, 36 |
| Conread position: | 361-524 |
| Cow position: | chr24:27810325-27810160 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 20, 36 |
| Conread position: | 361-527 |
| Cow position: | chr24:27279679-27279515 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 20, 36 |
| Conread position: | 361-551 |
| Cow position: | chr24:41406070-41405870 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 20, 33 |
| Conread position: | 361-555 |
| Cow position: | chr24:11840360-11840159 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 20, 168 |
| Conread position: | 362-521 |
| Cow position: | chr24:16995053-16994887 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 19, 90 |
| Conread position: | 362-533 |
| Cow position: | chr24:39523275-39523456 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 363-514 |
| Cow position: | chr24:18874646-18874808 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 18, 95 |
| Conread position: | 365-500 |
| Cow position: | chr24:3193099-3193246 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 16, 91 |
| Conread position: | 366-521 |
| Cow position: | chr24:17832658-17832815 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 15, 71 |
| Conread position: | 366-537 |
| Cow position: | chr24:39218381-39218562 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 13, 162 |
| Conread position: | 370-521 |
| Cow position: | chr24:36303156-36303311 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 378-521 |
| Cow position: | chr24:35249961-35250106 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 5, 63 |
| Conread position: | 394-556 |
| Cow position: | chr24:7276011-7275850 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 92, 35 |
| Conread position: | 400-521 |
| Cow position: | chr24:352480-352600 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 86, 45 |
| Conread position: | 401-507 |
| Cow position: | chr24:38427987-38428093 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 85, 44 |
| Conread position: | 401-519 |
| Cow position: | chr24:10300203-10300084 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 95 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 18, 44 |
| Conread position: | 401-521 |
| Cow position: | chr24:162129-162009 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 85, 44 |
| Conread position: | 401-521 |
| Cow position: | chr24:2261793-2261673 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 83, 43 |
| Conread position: | 401-521 |
| Cow position: | chr24:20017302-20017422 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 85, 44 |
| Conread position: | 401-521 |
| Cow position: | chr24:22420086-22419966 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 85, 38 |
| Conread position: | 401-521 |
| Cow position: | chr24:32230381-32230500 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 85, 7 |
| Conread position: | 401-521 |
| Cow position: | chr24:44987249-44987369 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 85, 43 |
| Conread position: | 401-522 |
| Cow position: | chr24:9300753-9300632 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 86, 62 |
| Conread position: | 401-527 |
| Cow position: | chr24:27271052-27270925 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 101 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 83, 38 |
| Conread position: | 401-533 |
| Cow position: | chr24:16641036-16640904 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 85, 44 |
| Conread position: | 401-533 |
| Cow position: | chr24:29677787-29677921 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 43, 124 |
| Conread position: | 402-512 |
| Cow position: | chr24:42862747-42862637 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 92 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 84, 37 |
| Conread position: | 402-521 |
| Cow position: | chr24:17294073-17294191 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 95 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 84, 46 |
| Conread position: | 402-521 |
| Cow position: | chr24:18810956-18810837 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 95 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 84, 43 |
| Conread position: | 402-522 |
| Cow position: | chr24:26880877-26880758 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 84, 37 |
| Conread position: | 403-548 |
| Cow position: | chr24:18405158-18405302 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 83, 26 |
| Conread position: | 404-562 |
| Cow position: | chr24:250415-250571 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 82, 40 |
| Conread position: | 415-526 |
| Cow position: | chr24:7390225-7390336 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 90 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 71, 30 |
| Conread position: | 421-520 |
| Cow position: | chr24:41412191-41412290 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 84 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 64, 23 |
Show alignments to all cow chromosomes.