Cow genome map
| Conread name: | mE4-MI-P-E4-abp-f-06-1-UM.s1 |
| Conread position: | 290-521 |
| Cow position: | chr3:25037758-25037986 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 91, 39 |
| Conread position: | 311-529 |
| Cow position: | chr3:83325435-83325208 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 42, 131 |
| Conread position: | 312-520 |
| Cow position: | chr3:79207491-79207696 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 55, 17 |
| Conread position: | 315-521 |
| Cow position: | chr3:17039833-17039618 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 18, 77 |
| Conread position: | 328-550 |
| Cow position: | chr3:60186362-60186119 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 39, 16 |
| Conread position: | 339-533 |
| Cow position: | chr3:80958309-80958516 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 24, 124 |
| Conread position: | 340-521 |
| Cow position: | chr3:47198928-47199121 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 26, 52 |
| Conread position: | 342-519 |
| Cow position: | chr3:20911219-20911402 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 39, 14 |
| Conread position: | 342-555 |
| Cow position: | chr3:20841684-20841901 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 39, 92 |
| Conread position: | 343-555 |
| Cow position: | chr3:15153882-15153663 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 38, 108 |
| Conread position: | 344-505 |
| Cow position: | chr3:44218950-44218787 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 43, 53 |
| Conread position: | 344-521 |
| Cow position: | chr3:3556741-3556551 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 37, 108 |
| Conread position: | 344-521 |
| Cow position: | chr3:3708786-3708609 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 43, 63 |
| Conread position: | 344-521 |
| Cow position: | chr3:11253969-11254162 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 13, 116 |
| Conread position: | 344-521 |
| Cow position: | chr3:18831612-18831427 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 9, 94 |
| Conread position: | 344-521 |
| Cow position: | chr3:57577879-57577703 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 12, 64 |
| Conread position: | 344-521 |
| Cow position: | chr3:84137621-84137809 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 37, 111 |
| Conread position: | 344-522 |
| Cow position: | chr3:3656709-3656519 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 22, 111 |
| Conread position: | 344-533 |
| Cow position: | chr3:70431616-70431423 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 34, 60 |
| Conread position: | 344-538 |
| Cow position: | chr3:2025395-2025188 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 37, 12 |
| Conread position: | 344-551 |
| Cow position: | chr3:73513870-73514073 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 37, 63 |
| Conread position: | 344-555 |
| Cow position: | chr3:1517322-1517540 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 37, 16 |
| Conread position: | 346-535 |
| Cow position: | chr3:3985508-3985313 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 22, 93 |
| Conread position: | 347-526 |
| Cow position: | chr3:48241796-48241615 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 34, 29 |
| Conread position: | 349-521 |
| Cow position: | chr3:63069173-63069360 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 145 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 33, 110 |
| Conread position: | 349-551 |
| Cow position: | chr3:27246780-27246983 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 32, 12 |
| Conread position: | 350-484 |
| Cow position: | chr3:55972896-55973034 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 31, 99 |
| Conread position: | 350-515 |
| Cow position: | chr3:23804690-23804517 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 14, 44 |
| Conread position: | 350-521 |
| Cow position: | chr3:71231584-71231402 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 31, 11 |
| Conread position: | 350-533 |
| Cow position: | chr3:18687086-18686899 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 31, 10 |
| Conread position: | 351-512 |
| Cow position: | chr3:14211800-14211968 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 30, 100 |
| Conread position: | 351-521 |
| Cow position: | chr3:24596247-24596417 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 30, 73 |
| Conread position: | 351-521 |
| Cow position: | chr3:32376998-32376819 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 30, 102 |
| Conread position: | 351-521 |
| Cow position: | chr3:48468362-48468179 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 30, 101 |
| Conread position: | 351-521 |
| Cow position: | chr3:49482528-49482710 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 351-521 |
| Cow position: | chr3:59317886-59317708 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 31, 129 |
| Conread position: | 351-526 |
| Cow position: | chr3:75777883-75778062 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 138 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 30, 56 |
| Conread position: | 351-555 |
| Cow position: | chr3:48253065-48252857 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 30, 89 |
| Conread position: | 352-521 |
| Cow position: | chr3:55712616-55712446 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 29, 55 |
| Conread position: | 352-521 |
| Cow position: | chr3:79398330-79398148 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 29, 109 |
| Conread position: | 352-526 |
| Cow position: | chr3:30180268-30180086 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 29, 99 |
| Conread position: | 352-527 |
| Cow position: | chr3:58010649-58010830 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 29, 99 |
| Conread position: | 352-534 |
| Cow position: | chr3:11608002-11607815 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 29, 99 |
| Conread position: | 353-512 |
| Cow position: | chr3:40212851-40213019 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 28, 54 |
| Conread position: | 353-520 |
| Cow position: | chr3:59597357-59597185 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 29, 54 |
| Conread position: | 353-521 |
| Cow position: | chr3:26982233-26982064 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 28, 41 |
| Conread position: | 353-525 |
| Cow position: | chr3:59588828-59588640 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 354-512 |
| Cow position: | chr3:36160017-36160178 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 27, 78 |
| Conread position: | 354-533 |
| Cow position: | chr3:15973751-15973561 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 27, 13 |
| Conread position: | 356-515 |
| Cow position: | chr3:51150311-51150140 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 134 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 356-519 |
| Cow position: | chr3:68587200-68587031 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 21, 96 |
| Conread position: | 356-520 |
| Cow position: | chr3:3163934-3164103 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 25, 104 |
| Conread position: | 356-521 |
| Cow position: | chr3:2392788-2392963 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 356-521 |
| Cow position: | chr3:18699927-18700105 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 25, 101 |
| Conread position: | 356-521 |
| Cow position: | chr3:55730285-55730463 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 26, 102 |
| Conread position: | 356-521 |
| Cow position: | chr3:62186339-62186157 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 356-535 |
| Cow position: | chr3:76300955-76300763 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 25, 101 |
| Conread position: | 356-538 |
| Cow position: | chr3:59885712-59885529 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 25, 78 |
| Conread position: | 356-539 |
| Cow position: | chr3:4050363-4050181 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 15, 52 |
| Conread position: | 356-539 |
| Cow position: | chr3:78071611-78071803 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 25, 171 |
| Conread position: | 358-531 |
| Cow position: | chr3:23753663-23753487 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 26, 76 |
| Conread position: | 360-506 |
| Cow position: | chr3:22078255-22078096 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 21, 97 |
| Conread position: | 360-521 |
| Cow position: | chr3:22888837-22889011 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 360-521 |
| Cow position: | chr3:24468207-24468379 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 21, 96 |
| Conread position: | 360-539 |
| Cow position: | chr3:14465538-14465718 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 21, 33 |
| Conread position: | 361-513 |
| Cow position: | chr3:3011321-3011160 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 361-513 |
| Cow position: | chr3:72342424-72342259 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 20, 97 |
| Conread position: | 361-515 |
| Cow position: | chr3:3453758-3453591 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 20, 96 |
| Conread position: | 361-515 |
| Cow position: | chr3:7381656-7381821 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 361-515 |
| Cow position: | chr3:28415933-28415774 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 29, 89 |
| Conread position: | 361-515 |
| Cow position: | chr3:42589275-42589110 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 361-519 |
| Cow position: | chr3:37641502-37641334 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 20, 43 |
| Conread position: | 361-520 |
| Cow position: | chr3:4271541-4271379 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 20, 64 |
| Conread position: | 361-520 |
| Cow position: | chr3:48900154-48900326 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 21, 96 |
| Conread position: | 361-520 |
| Cow position: | chr3:69650722-69650882 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 20, 63 |
| Conread position: | 361-521 |
| Cow position: | chr3:15859206-15859373 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 20, 110 |
| Conread position: | 361-521 |
| Cow position: | chr3:18459361-18459522 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 20, 32 |
| Conread position: | 361-521 |
| Cow position: | chr3:21694403-21694230 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 361-521 |
| Cow position: | chr3:25060491-25060333 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 125, 36 |
| Conread position: | 361-521 |
| Cow position: | chr3:31309178-31309348 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 21, 94 |
| Conread position: | 361-521 |
| Cow position: | chr3:35075048-35074884 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 20, 76 |
| Conread position: | 361-521 |
| Cow position: | chr3:58101851-58101685 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 20, 130 |
| Conread position: | 361-521 |
| Cow position: | chr3:59681731-59681898 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 361-521 |
| Cow position: | chr3:60371160-60370988 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 20, 96 |
| Conread position: | 361-522 |
| Cow position: | chr3:12090853-12090677 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 361-522 |
| Cow position: | chr3:18067306-18067137 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 20, 33 |
| Conread position: | 361-526 |
| Cow position: | chr3:17134507-17134335 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 20, 91 |
| Conread position: | 361-526 |
| Cow position: | chr3:54905782-54905615 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 20, 82 |
| Conread position: | 361-526 |
| Cow position: | chr3:82366305-82366124 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 361-527 |
| Cow position: | chr3:23877170-23877002 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 32, 88 |
| Conread position: | 361-533 |
| Cow position: | chr3:70402814-70402639 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 20, 88 |
| Conread position: | 361-533 |
| Cow position: | chr3:79272400-79272578 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 21, 92 |
| Conread position: | 361-534 |
| Cow position: | chr3:33252716-33252895 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 20, 163 |
| Conread position: | 361-538 |
| Cow position: | chr3:15443550-15443739 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 21, 96 |
| Conread position: | 361-542 |
| Cow position: | chr3:8147347-8147540 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 20, 96 |
| Conread position: | 361-549 |
| Cow position: | chr3:43388949-43389150 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 20, 97 |
| Conread position: | 361-555 |
| Cow position: | chr3:15228665-15228851 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 20, 45 |
| Conread position: | 361-558 |
| Cow position: | chr3:19793073-19792874 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 20, 32 |
| Conread position: | 362-520 |
| Cow position: | chr3:2016607-2016442 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 19, 83 |
| Conread position: | 362-520 |
| Cow position: | chr3:68303493-68303321 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 362-520 |
| Cow position: | chr3:72027814-72027644 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 19, 96 |
| Conread position: | 362-521 |
| Cow position: | chr3:39873533-39873689 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 19, 45 |
| Conread position: | 362-521 |
| Cow position: | chr3:75050448-75050611 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 33, 23 |
| Conread position: | 362-521 |
| Cow position: | chr3:76056113-76056279 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 19, 45 |
| Conread position: | 362-533 |
| Cow position: | chr3:56948921-56949095 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 20, 31 |
| Conread position: | 362-545 |
| Cow position: | chr3:19435283-19435096 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 19, 32 |
| Conread position: | 362-555 |
| Cow position: | chr3:37041591-37041391 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 19, 84 |
| Conread position: | 362-555 |
| Cow position: | chr3:73395290-73395089 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 19, 169 |
| Conread position: | 362-556 |
| Cow position: | chr3:31352709-31352905 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 19, 56 |
| Conread position: | 362-561 |
| Cow position: | chr3:14601537-14601737 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 19, 32 |
| Conread position: | 363-513 |
| Cow position: | chr3:42484101-42483940 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 22, 91 |
| Conread position: | 363-533 |
| Cow position: | chr3:39996720-39996896 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 19, 9 |
| Conread position: | 364-529 |
| Cow position: | chr3:2538410-2538237 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 17, 93 |
| Conread position: | 366-521 |
| Cow position: | chr3:41863793-41863631 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 16, 85 |
| Conread position: | 366-533 |
| Cow position: | chr3:3889406-3889574 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 15, 41 |
| Conread position: | 366-575 |
| Cow position: | chr3:80023144-80023357 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 15, 84 |
| Conread position: | 369-532 |
| Cow position: | chr3:51233936-51234105 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 12, 38 |
| Conread position: | 373-529 |
| Cow position: | chr3:59000599-59000758 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 8, 34 |
| Conread position: | 376-539 |
| Cow position: | chr3:5003793-5003623 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 6, 31 |
| Conread position: | 386-521 |
| Cow position: | chr3:66631204-66631346 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 388-528 |
| Cow position: | chr3:73162248-73162393 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 7, 61 |
| Conread position: | 400-521 |
| Cow position: | chr3:53875638-53875759 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 86, 45 |
| Conread position: | 401-515 |
| Cow position: | chr3:62789827-62789943 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 401-520 |
| Cow position: | chr3:61023897-61024016 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 85, 43 |
| Conread position: | 401-521 |
| Cow position: | chr3:2675155-2675035 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 96 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 85, 43 |
| Conread position: | 401-521 |
| Cow position: | chr3:5703299-5703184 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 99 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 401-521 |
| Cow position: | chr3:11281892-11281772 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 84, 44 |
| Conread position: | 401-521 |
| Cow position: | chr3:11640859-11640739 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 96 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 85, 43 |
| Conread position: | 401-521 |
| Cow position: | chr3:28898096-28898217 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 98 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 401-521 |
| Cow position: | chr3:36375415-36375534 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 83, 21 |
| Conread position: | 401-521 |
| Cow position: | chr3:37851622-37851502 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 81, 10 |
| Conread position: | 401-521 |
| Cow position: | chr3:38783731-38783612 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 100 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 85, 22 |
| Conread position: | 401-521 |
| Cow position: | chr3:48483304-48483184 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 85, 45 |
| Conread position: | 401-521 |
| Cow position: | chr3:67942410-67942530 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 85, 43 |
| Conread position: | 401-521 |
| Cow position: | chr3:70756516-70756636 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 100 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 85, 43 |
| Conread position: | 401-521 |
| Cow position: | chr3:72391211-72391088 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 401-521 |
| Cow position: | chr3:79271586-79271705 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 101 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 85, 10 |
| Conread position: | 401-521 |
| Cow position: | chr3:80910720-80910601 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 85, 36 |
| Conread position: | 401-521 |
| Cow position: | chr3:83199636-83199517 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 85, 42 |
| Conread position: | 401-521 |
| Cow position: | chr3:84807202-84807322 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 85, 43 |
| Conread position: | 401-526 |
| Cow position: | chr3:29234554-29234680 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 103 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 29, 39 |
| Conread position: | 401-526 |
| Cow position: | chr3:53046535-53046662 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 25, 45 |
| Conread position: | 401-527 |
| Cow position: | chr3:210445-210318 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 85, 43 |
| Conread position: | 401-532 |
| Cow position: | chr3:62312921-62312792 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 45, 34 |
| Conread position: | 401-532 |
| Cow position: | chr3:62370180-62370051 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 45, 34 |
| Conread position: | 401-533 |
| Cow position: | chr3:23203106-23203236 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 85, 43 |
| Conread position: | 401-533 |
| Cow position: | chr3:40145590-40145459 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 85, 43 |
| Conread position: | 401-555 |
| Cow position: | chr3:53270956-53270802 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 85, 43 |
| Conread position: | 401-566 |
| Cow position: | chr3:9718126-9718291 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 85, 44 |
| Conread position: | 402-521 |
| Cow position: | chr3:41366585-41366704 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 84, 42 |
| Conread position: | 402-521 |
| Cow position: | chr3:44960067-44959948 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 84, 42 |
| Conread position: | 402-521 |
| Cow position: | chr3:45211426-45211307 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 84, 42 |
| Conread position: | 402-521 |
| Cow position: | chr3:51609062-51609180 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 101 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 83, 43 |
| Conread position: | 402-528 |
| Cow position: | chr3:27976401-27976524 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 84, 10 |
| Conread position: | 402-533 |
| Cow position: | chr3:1011614-1011481 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 39, 54 |
| Conread position: | 402-551 |
| Cow position: | chr3:70319679-70319827 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 84, 125 |
| Conread position: | 403-521 |
| Cow position: | chr3:9663048-9663166 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 97 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 83, 42 |
| Conread position: | 411-521 |
| Cow position: | chr3:5366884-5366775 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 91 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 74, 34 |
| Conread position: | 411-525 |
| Cow position: | chr3:59588629-59588512 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 415-521 |
| Cow position: | chr3:66900621-66900727 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 88 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 72, 29 |
| Conread position: | 415-555 |
| Cow position: | chr3:57877682-57877538 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 22, 111 |
| Conread position: | 418-538 |
| Cow position: | chr3:57760607-57760487 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 68, 26 |
| Conread position: | 419-526 |
| Cow position: | chr3:44534427-44534534 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 66, 91 |
| Conread position: | 438-555 |
| Cow position: | chr3:54100636-54100754 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 95 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 46, 98 |
Show alignments to all cow chromosomes.