Cow genome map
| Conread name: | mE4-MI-P-E4-abp-f-06-1-UM.s1 |
| Conread position: | 306-526 |
| Cow position: | chrX:15146919-15147145 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 14, 34 |
| Conread position: | 315-521 |
| Cow position: | chrX:27171009-27170796 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 7, 47 |
| Conread position: | 327-521 |
| Cow position: | chrX:46588081-46587879 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 39, 14 |
| Conread position: | 331-521 |
| Cow position: | chrX:30133066-30133261 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 50, 25 |
| Conread position: | 338-526 |
| Cow position: | chrX:35269108-35268913 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 43, 113 |
| Conread position: | 343-527 |
| Cow position: | chrX:24170478-24170679 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 344-502 |
| Cow position: | chrX:42506700-42506873 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 344-520 |
| Cow position: | chrX:42492275-42492465 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 37, 109 |
| Conread position: | 344-521 |
| Cow position: | chrX:8759870-8759683 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 144 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 22, 109 |
| Conread position: | 344-521 |
| Cow position: | chrX:20977268-20977452 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 37, 17 |
| Conread position: | 344-521 |
| Cow position: | chrX:26979545-26979732 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 37, 106 |
| Conread position: | 344-521 |
| Cow position: | chrX:27705834-27705643 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 9, 114 |
| Conread position: | 344-521 |
| Cow position: | chrX:32877132-32877318 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 24, 51 |
| Conread position: | 344-521 |
| Cow position: | chrX:42461381-42461561 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 37, 98 |
| Conread position: | 344-522 |
| Cow position: | chrX:27175249-27175054 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 12, 117 |
| Conread position: | 344-532 |
| Cow position: | chrX:41878690-41878890 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 9, 110 |
| Conread position: | 344-533 |
| Cow position: | chrX:34222944-34222762 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 344-551 |
| Cow position: | chrX:24633928-24633720 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 37, 16 |
| Conread position: | 345-521 |
| Cow position: | chrX:33654600-33654787 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 36, 15 |
| Conread position: | 345-521 |
| Cow position: | chrX:37751866-37752049 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 36, 83 |
| Conread position: | 345-521 |
| Cow position: | chrX:42836416-42836238 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 23, 60 |
| Conread position: | 345-526 |
| Cow position: | chrX:28850956-28850775 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 66, 15 |
| Conread position: | 350-522 |
| Cow position: | chrX:16575339-16575168 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 31, 44 |
| Conread position: | 351-515 |
| Cow position: | chrX:29327989-29327825 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 135, 93 |
| Conread position: | 352-521 |
| Cow position: | chrX:12290956-12290776 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 352-521 |
| Cow position: | chrX:15100216-15100040 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 352-521 |
| Cow position: | chrX:30962636-30962820 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 14, 101 |
| Conread position: | 352-521 |
| Cow position: | chrX:44123487-44123312 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 29, 92 |
| Conread position: | 352-521 |
| Cow position: | chrX:46910046-46909872 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 29, 45 |
| Conread position: | 352-527 |
| Cow position: | chrX:34441215-34441404 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 29, 106 |
| Conread position: | 352-555 |
| Cow position: | chrX:11656316-11656104 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 29, 179 |
| Conread position: | 353-521 |
| Cow position: | chrX:597241-597417 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 27, 105 |
| Conread position: | 353-521 |
| Cow position: | chrX:25035144-25035325 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 28, 97 |
| Conread position: | 353-521 |
| Cow position: | chrX:39180009-39180176 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 29, 50 |
| Conread position: | 353-555 |
| Cow position: | chrX:20339658-20339869 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 28, 102 |
| Conread position: | 354-533 |
| Cow position: | chrX:27415351-27415536 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 15, 95 |
| Conread position: | 354-533 |
| Cow position: | chrX:48822108-48822296 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 27, 7 |
| Conread position: | 354-535 |
| Cow position: | chrX:19356702-19356506 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 7, 105 |
| Conread position: | 356-516 |
| Cow position: | chrX:19717745-19717582 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 30, 37 |
| Conread position: | 356-521 |
| Cow position: | chrX:13177250-13177419 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 25, 37 |
| Conread position: | 356-521 |
| Cow position: | chrX:24332011-24331833 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 25, 102 |
| Conread position: | 356-521 |
| Cow position: | chrX:25925422-25925585 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 25, 50 |
| Conread position: | 356-521 |
| Cow position: | chrX:35885498-35885670 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 25, 95 |
| Conread position: | 356-527 |
| Cow position: | chrX:41790193-41790379 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 26, 51 |
| Conread position: | 356-527 |
| Cow position: | chrX:46068528-46068709 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 8, 52 |
| Conread position: | 357-519 |
| Cow position: | chrX:11602253-11602424 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 7, 92 |
| Conread position: | 360-521 |
| Cow position: | chrX:16763700-16763868 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 21, 92 |
| Conread position: | 361-512 |
| Cow position: | chrX:9451570-9451411 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 20, 93 |
| Conread position: | 361-515 |
| Cow position: | chrX:16801038-16801200 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 20, 95 |
| Conread position: | 361-516 |
| Cow position: | chrX:11589138-11589305 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 361-519 |
| Cow position: | chrX:13122173-13121997 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 20, 97 |
| Conread position: | 361-520 |
| Cow position: | chrX:4092151-4091982 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 20, 94 |
| Conread position: | 361-520 |
| Cow position: | chrX:24054890-24054735 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 21, 53 |
| Conread position: | 361-521 |
| Cow position: | chrX:12095542-12095715 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 20, 97 |
| Conread position: | 361-521 |
| Cow position: | chrX:17966553-17966398 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 20, 33 |
| Conread position: | 361-521 |
| Cow position: | chrX:26205229-26205391 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 20, 15 |
| Conread position: | 361-521 |
| Cow position: | chrX:27668733-27668901 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 20, 91 |
| Conread position: | 361-521 |
| Cow position: | chrX:31729666-31729499 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 20, 93 |
| Conread position: | 361-521 |
| Cow position: | chrX:37956074-37955904 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 20, 94 |
| Conread position: | 361-521 |
| Cow position: | chrX:40337140-40336968 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 20, 97 |
| Conread position: | 361-521 |
| Cow position: | chrX:41941852-41941680 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 21, 95 |
| Conread position: | 361-524 |
| Cow position: | chrX:6541508-6541680 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 22, 36 |
| Conread position: | 361-525 |
| Cow position: | chrX:14925502-14925325 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 24, 96 |
| Conread position: | 361-526 |
| Cow position: | chrX:35392076-35392246 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 22, 41 |
| Conread position: | 361-526 |
| Cow position: | chrX:38094297-38094468 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 20, 38 |
| Conread position: | 361-532 |
| Cow position: | chrX:18964605-18964783 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 20, 45 |
| Conread position: | 361-533 |
| Cow position: | chrX:4632625-4632812 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 20, 97 |
| Conread position: | 361-533 |
| Cow position: | chrX:6278282-6278454 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 46, 12 |
| Conread position: | 361-533 |
| Cow position: | chrX:9425533-9425709 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 20, 46 |
| Conread position: | 361-533 |
| Cow position: | chrX:16762997-16762817 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 21, 46 |
| Conread position: | 361-533 |
| Cow position: | chrX:27270598-27270421 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 20, 76 |
| Conread position: | 361-541 |
| Cow position: | chrX:47100365-47100560 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 20, 178 |
| Conread position: | 361-548 |
| Cow position: | chrX:33466851-33466652 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 20, 86 |
| Conread position: | 361-555 |
| Cow position: | chrX:35285403-35285196 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 20, 96 |
| Conread position: | 361-555 |
| Cow position: | chrX:36283569-36283361 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 20, 97 |
| Conread position: | 361-555 |
| Cow position: | chrX:42246952-42247159 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 20, 96 |
| Conread position: | 362-519 |
| Cow position: | chrX:40680843-40680673 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 19, 95 |
| Conread position: | 362-521 |
| Cow position: | chrX:25815671-25815844 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 19, 97 |
| Conread position: | 362-521 |
| Cow position: | chrX:38964325-38964165 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 19, 60 |
| Conread position: | 362-521 |
| Cow position: | chrX:41199450-41199281 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 19, 90 |
| Conread position: | 362-521 |
| Cow position: | chrX:42875437-42875269 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 19, 45 |
| Conread position: | 362-526 |
| Cow position: | chrX:7351529-7351348 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 362-535 |
| Cow position: | chrX:51674-51859 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 19, 87 |
| Conread position: | 362-538 |
| Cow position: | chrX:34753954-34754138 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 20, 91 |
| Conread position: | 362-538 |
| Cow position: | chrX:42894150-42893966 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 19, 168 |
| Conread position: | 362-539 |
| Cow position: | chrX:27446911-27446725 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 19, 45 |
| Conread position: | 362-542 |
| Cow position: | chrX:35409980-35409788 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 19, 96 |
| Conread position: | 362-555 |
| Cow position: | chrX:161628-161435 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 19, 31 |
| Conread position: | 363-521 |
| Cow position: | chrX:20887422-20887584 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 18, 25 |
| Conread position: | 363-555 |
| Cow position: | chrX:13924088-13923887 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 18, 91 |
| Conread position: | 364-521 |
| Cow position: | chrX:27508798-27508965 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 17, 116 |
| Conread position: | 365-521 |
| Cow position: | chrX:10516479-10516310 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 16, 87 |
| Conread position: | 365-521 |
| Cow position: | chrX:19761974-19761811 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 21, 42 |
| Conread position: | 366-542 |
| Cow position: | chrX:11653991-11653807 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 15, 87 |
| Conread position: | 374-521 |
| Cow position: | chrX:38208338-38208488 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 11, 73 |
| Conread position: | 374-521 |
| Cow position: | chrX:41809959-41810111 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 8, 75 |
| Conread position: | 400-522 |
| Cow position: | chrX:4109362-4109240 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 86, 45 |
| Conread position: | 400-527 |
| Cow position: | chrX:8731271-8731144 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 86, 39 |
| Conread position: | 401-515 |
| Cow position: | chrX:28107022-28106910 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 93 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 86, 28 |
| Conread position: | 401-516 |
| Cow position: | chrX:6480419-6480534 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 92 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 85, 44 |
| Conread position: | 401-516 |
| Cow position: | chrX:22552802-22552917 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 92 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 85, 44 |
| Conread position: | 401-516 |
| Cow position: | chrX:33678294-33678412 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 401-517 |
| Cow position: | chrX:44995676-44995559 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 95 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 85, 44 |
| Conread position: | 401-519 |
| Cow position: | chrX:26881903-26882021 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 85, 43 |
| Conread position: | 401-520 |
| Cow position: | chrX:32330347-32330224 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 77, 43 |
| Conread position: | 401-520 |
| Cow position: | chrX:42760429-42760310 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 96 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 85, 37 |
| Conread position: | 401-521 |
| Cow position: | chrX:2314442-2314562 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 101 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 85, 43 |
| Conread position: | 401-521 |
| Cow position: | chrX:6407720-6407601 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 85, 41 |
| Conread position: | 401-521 |
| Cow position: | chrX:8642221-8642103 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 96 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 401-521 |
| Cow position: | chrX:27261367-27261248 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 85, 26 |
| Conread position: | 401-521 |
| Cow position: | chrX:29451369-29451494 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 401-521 |
| Cow position: | chrX:32420387-32420269 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 85, 42 |
| Conread position: | 401-521 |
| Cow position: | chrX:32574492-32574374 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 86, 8 |
| Conread position: | 401-521 |
| Cow position: | chrX:34420912-34420791 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 21, 44 |
| Conread position: | 401-521 |
| Cow position: | chrX:34543961-34543841 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 85, 43 |
| Conread position: | 401-521 |
| Cow position: | chrX:35276162-35276042 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 85, 43 |
| Conread position: | 401-521 |
| Cow position: | chrX:35681743-35681624 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 85, 37 |
| Conread position: | 401-521 |
| Cow position: | chrX:36866349-36866230 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 85, 45 |
| Conread position: | 401-521 |
| Cow position: | chrX:42087004-42086885 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 85, 38 |
| Conread position: | 401-521 |
| Cow position: | chrX:42449837-42449957 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 85, 43 |
| Conread position: | 401-522 |
| Cow position: | chrX:12309209-12309330 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 85, 44 |
| Conread position: | 401-526 |
| Cow position: | chrX:1122370-1122495 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 85, 43 |
| Conread position: | 401-531 |
| Cow position: | chrX:5063414-5063292 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 401-533 |
| Cow position: | chrX:27228305-27228172 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 30, 44 |
| Conread position: | 401-533 |
| Cow position: | chrX:46533128-46533261 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 85, 43 |
| Conread position: | 401-534 |
| Cow position: | chrX:23335799-23335934 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 85, 44 |
| Conread position: | 401-534 |
| Cow position: | chrX:37867609-37867476 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 85, 38 |
| Conread position: | 401-538 |
| Cow position: | chrX:31250565-31250428 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 85, 44 |
| Conread position: | 401-542 |
| Cow position: | chrX:21672738-21672597 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 85, 132 |
| Conread position: | 401-551 |
| Cow position: | chrX:4515864-4515721 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 60, 27 |
| Conread position: | 401-555 |
| Cow position: | chrX:46532314-46532472 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 34, 125 |
| Conread position: | 402-519 |
| Cow position: | chrX:10237738-10237854 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 84, 42 |
| Conread position: | 402-519 |
| Cow position: | chrX:31489696-31489579 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 84, 41 |
| Conread position: | 402-521 |
| Cow position: | chrX:29478897-29478781 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 84, 27 |
| Conread position: | 402-521 |
| Cow position: | chrX:36976127-36976008 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 94 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 84, 42 |
| Conread position: | 402-521 |
| Cow position: | chrX:43008785-43008666 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 95 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 84, 42 |
| Conread position: | 403-515 |
| Cow position: | chrX:34554898-34554786 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 92 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 83, 42 |
| Conread position: | 403-521 |
| Cow position: | chrX:37867428-37867310 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 83, 41 |
| Conread position: | 403-521 |
| Cow position: | chrX:41027334-41027216 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 103 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 83, 41 |
| Conread position: | 404-555 |
| Cow position: | chrX:21328087-21327934 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 82, 40 |
| Conread position: | 406-526 |
| Cow position: | chrX:14599704-14599585 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 81, 39 |
| Conread position: | 411-522 |
| Cow position: | chrX:20345617-20345506 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 91 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 75, 33 |
| Conread position: | 415-521 |
| Cow position: | chrX:20743768-20743661 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 88 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 415-533 |
| Cow position: | chrX:37129432-37129315 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 71, 30 |
| Conread position: | 418-521 |
| Cow position: | chrX:31373696-31373593 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 87 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 68, 26 |
| Conread position: | 430-551 |
| Cow position: | chrX:38728882-38728761 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 56, 8 |
Show alignments to all cow chromosomes.