Cow genome map

Conread name: mE4-MI-P-E4-adc-g-11-1-UM.s1

Conread position: 1-283
Cow position: chr10:38544103-38544387 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 202
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 19, 66

Conread position: 5-283
Cow position: chr10:22103016-22102740 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 205
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 13, 31

Conread position: 6-283
Cow position: chr10:21488739-21488461 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 205
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 171, 32

Conread position: 6-283
Cow position: chr10:62406999-62407274 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 199
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 173, 32

Conread position: 10-283
Cow position: chr10:7280328-7280607 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 204
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 162, 25

Conread position: 12-274
Cow position: chr10:55025351-55025095 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 188
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 41, 17

Conread position: 12-277
Cow position: chr10:32702531-32702265 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 195
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 165, 23

Conread position: 12-278
Cow position: chr10:23409475-23409731 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 193
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 23, 0

Conread position: 12-281
Cow position: chr10:8325337-8325597 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 198
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 14, 0

Conread position: 12-283
Cow position: chr10:1379271-1378999 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 199
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 165, 17

Conread position: 12-283
Cow position: chr10:8291818-8291550 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 200
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 167, 23

Conread position: 12-283
Cow position: chr10:14334071-14334331 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 188
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 116, 23

Conread position: 12-283
Cow position: chr10:22346734-22346462 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 197
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 164, 22

Conread position: 12-283
Cow position: chr10:22644773-22644504 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 201
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 147, 16

Conread position: 12-283
Cow position: chr10:29109210-29109483 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 16

Conread position: 12-283
Cow position: chr10:30683716-30683989 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 201
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 68, 23

Conread position: 12-283
Cow position: chr10:37771659-37771388 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 200
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 165, 23

Conread position: 12-283
Cow position: chr10:39439927-39439655 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 197
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 165, 23

Conread position: 12-283
Cow position: chr10:55095040-55094769 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 197
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 164, 22

Conread position: 13-277
Cow position: chr10:16927446-16927178 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 196
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 164, 13

Conread position: 13-278
Cow position: chr10:19705852-19706123 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 198
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 105, 15

Conread position: 14-261
Cow position: chr10:31539903-31539656 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 180
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 163, 22

Conread position: 15-266
Cow position: chr10:20369336-20369584 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 185
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 34, 20

Conread position: 16-253
Cow position: chr10:41150960-41151201 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 178
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 160, 82

Conread position: 16-283
Cow position: chr10:57988225-57988491 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 18

Conread position: 16-283
Cow position: chr10:58376543-58376802 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 191
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 55, 13

Conread position: 25-282
Cow position: chr10:22908701-22908959 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 194
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 25, 201

Conread position: 26-175
Cow position: chr10:20374800-20374949 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 108
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 29-283
Cow position: chr10:46196803-46196561 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 181
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 147, 95

Conread position: 31-252
Cow position: chr10:25339856-25339631 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 167
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 145, 204

Conread position: 35-274
Cow position: chr10:47908690-47908451 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 172
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 20, 43

Conread position: 37-283
Cow position: chr10:10583875-10583625 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 183
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 140, 53

Conread position: 41-283
Cow position: chr10:19841429-19841182 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 177
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 135, 0

Conread position: 55-283
Cow position: chr10:17434103-17433870 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 168
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 12, 131

Conread position: 69-283
Cow position: chr10:14805568-14805349 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 165
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 107, 0

Conread position: 70-281
Cow position: chr10:41159134-41158918 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 161
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 106, 0

Conread position: 70-283
Cow position: chr10:7896760-7896979 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 164
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 106, 0

Conread position: 70-283
Cow position: chr10:10172456-10172238 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 161
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 106, 0

Conread position: 70-283
Cow position: chr10:25651708-25651926 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 166
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 106, 0

Conread position: 70-283
Cow position: chr10:28255687-28255913 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 165
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 44, 35

Conread position: 70-283
Cow position: chr10:39814678-39814895 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 164
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 106, 35

Conread position: 70-283
Cow position: chr10:41568822-41568604 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 159
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 106, 0

Conread position: 70-283
Cow position: chr10:41878645-41878427 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 162
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 106, 0

Conread position: 70-283
Cow position: chr10:68159916-68160134 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 164
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 108, 0

Conread position: 71-243
Cow position: chr10:14863511-14863344 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 96, 0

Conread position: 72-283
Cow position: chr10:57555616-57555832 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 163
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 104, 0

Conread position: 79-283
Cow position: chr10:21739045-21739252 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 153
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 97, 33

Conread position: 79-283
Cow position: chr10:39181508-39181299 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 151
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 97, 0

Conread position: 81-283
Cow position: chr10:31525445-31525239 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 155
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 80, 14

Conread position: 91-283
Cow position: chr10:44707912-44708108 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 151
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 85, 99

Conread position: 113-283
Cow position: chr10:5256387-5256562 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 63, 0

Conread position: 121-283
Cow position: chr10:55285612-55285444 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 129
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 52, 114

Show alignments to all cow chromosomes.