Cow genome map

Conread name: mE4-MI-P-E4-adc-g-11-1-UM.s1

Conread position: 9-283
Cow position: chr15:35751947-35752222 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 203
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 48, 26

Conread position: 9-283
Cow position: chr15:53410265-53409997 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 193
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 167, 31

Conread position: 11-279
Cow position: chr15:24288119-24288383 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 179
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 174, 26

Conread position: 12-263
Cow position: chr15:368298-368544 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 176
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 175, 16

Conread position: 12-270
Cow position: chr15:1765671-1765414 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 188
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 165, 17

Conread position: 12-271
Cow position: chr15:6590760-6591020 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 195
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 164, 26

Conread position: 12-275
Cow position: chr15:53339578-53339312 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 192
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 100, 25

Conread position: 12-278
Cow position: chr15:32067254-32067520 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 198
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 164, 22

Conread position: 12-279
Cow position: chr15:6479735-6479477 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 187
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 165, 10

Conread position: 12-280
Cow position: chr15:4687085-4686815 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 196
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 164, 22

Conread position: 12-283
Cow position: chr15:1299175-1299464 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 203
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 76, 17

Conread position: 12-283
Cow position: chr15:1833284-1833555 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 200
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 22, 45

Conread position: 12-283
Cow position: chr15:2013917-2013642 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 191
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 102, 22

Conread position: 12-283
Cow position: chr15:2900905-2901178 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 197
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 165, 23

Conread position: 12-283
Cow position: chr15:4387112-4386839 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 201
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 165, 24

Conread position: 12-283
Cow position: chr15:4726557-4726285 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 202
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 160, 23

Conread position: 12-283
Cow position: chr15:4916529-4916257 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 200
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 84, 22

Conread position: 12-283
Cow position: chr15:6154571-6154843 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 23

Conread position: 12-283
Cow position: chr15:6382806-6383068 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 183
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 23, 0

Conread position: 12-283
Cow position: chr15:7564353-7564080 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 196
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 164, 22

Conread position: 12-283
Cow position: chr15:7838624-7838352 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 202
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 167, 23

Conread position: 12-283
Cow position: chr15:10478171-10478442 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 31

Conread position: 12-283
Cow position: chr15:15345753-15346024 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 197
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 168, 22

Conread position: 12-283
Cow position: chr15:17077208-17077479 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 199
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 22, 45

Conread position: 12-283
Cow position: chr15:18331477-18331750 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 24

Conread position: 12-283
Cow position: chr15:18578070-18577801 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 197
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 165, 26

Conread position: 12-283
Cow position: chr15:20411951-20411681 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 23

Conread position: 12-283
Cow position: chr15:24296442-24296174 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 195
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 165, 23

Conread position: 12-283
Cow position: chr15:32492528-32492800 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 202
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 43, 23

Conread position: 13-281
Cow position: chr15:4672789-4672519 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 196
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 164, 25

Conread position: 16-253
Cow position: chr15:8698583-8698813 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 175
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 177, 12

Conread position: 16-271
Cow position: chr15:36669055-36668805 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 191
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 163, 12

Conread position: 16-279
Cow position: chr15:20355243-20355503 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 179
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 41, 48

Conread position: 16-283
Cow position: chr15:19736706-19736972 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 197
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 163, 19

Conread position: 16-283
Cow position: chr15:24718675-24718414 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 195
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 71, 25

Conread position: 29-281
Cow position: chr15:44071939-44071686 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 188
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 148, 11

Conread position: 29-283
Cow position: chr15:25653725-25653983 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 190
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 137, 37

Conread position: 31-283
Cow position: chr15:35646344-35646595 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 159

Conread position: 32-273
Cow position: chr15:32479257-32479503 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 172
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 112, 204

Conread position: 38-282
Cow position: chr15:3259989-3260236 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 174
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 138, 0

Conread position: 38-283
Cow position: chr15:33122711-33122461 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 176
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 138, 0

Conread position: 41-281
Cow position: chr15:580747-580513 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 180
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 168, 36

Conread position: 46-283
Cow position: chr15:2646328-2646566 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 173
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 141, 0

Conread position: 66-277
Cow position: chr15:4951405-4951189 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 159
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 79, 125

Conread position: 69-283
Cow position: chr15:2588145-2588365 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 156
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 107, 0

Conread position: 70-243
Cow position: chr15:1238986-1238808 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 102, 130

Conread position: 70-252
Cow position: chr15:7235626-7235438 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 106, 169

Conread position: 70-254
Cow position: chr15:8100762-8100573 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 105, 0

Conread position: 70-274
Cow position: chr15:32712538-32712329 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 148
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 106, 0

Conread position: 70-282
Cow position: chr15:4141436-4141650 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 160
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 109, 0

Conread position: 70-283
Cow position: chr15:58953-58738 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 154
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 106, 121

Conread position: 70-283
Cow position: chr15:107302-107084 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 166
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 44, 35

Conread position: 70-283
Cow position: chr15:1773801-1773587 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 165
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 106, 134

Conread position: 70-283
Cow position: chr15:3008543-3008759 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 160
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 105, 120

Conread position: 70-283
Cow position: chr15:4197768-4197550 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 161
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 107, 0

Conread position: 70-283
Cow position: chr15:5010330-5010548 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 167
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 106, 0

Conread position: 70-283
Cow position: chr15:6114879-6114674 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 148
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 72, 0

Conread position: 70-283
Cow position: chr15:6561888-6561670 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 165
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 107, 0

Conread position: 70-283
Cow position: chr15:6614023-6613805 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 162
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 106, 0

Conread position: 70-283
Cow position: chr15:9911931-9912148 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 159
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 98, 0

Conread position: 70-283
Cow position: chr15:25205705-25205921 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 163
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 106, 156

Conread position: 70-283
Cow position: chr15:28488852-28489066 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 153
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 114, 130

Conread position: 70-283
Cow position: chr15:35737097-35736880 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 164
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 106, 199

Conread position: 70-283
Cow position: chr15:35898475-35898693 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 166
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 107, 0

Conread position: 70-283
Cow position: chr15:41659469-41659251 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 166
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 107, 0

Conread position: 71-279
Cow position: chr15:611003-611206 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 147
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 6, 27

Conread position: 72-274
Cow position: chr15:17294349-17294146 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 153
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 8, 14

Conread position: 72-276
Cow position: chr15:8751695-8751487 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 153
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 103, 197

Conread position: 72-283
Cow position: chr15:7261899-7261688 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 159
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 104, 12

Conread position: 72-283
Cow position: chr15:7892048-7892264 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 163
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 104, 0

Conread position: 77-283
Cow position: chr15:4766485-4766275 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 157
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 99, 192

Conread position: 79-281
Cow position: chr15:42531206-42531005 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 154
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 88, 6

Conread position: 89-283
Cow position: chr15:50148370-50148164 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 149
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 87, 0

Conread position: 95-283
Cow position: chr15:18266501-18266692 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 137
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 74, 37

Show alignments to all cow chromosomes.