Cow genome map
| Conread name: | mE4-MI-P-E4-adc-g-11-1-UM.s1 |
| Conread position: | 5-283 |
| Cow position: | chr2:22079158-22078874 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 166, 35 |
| Conread position: | 6-264 |
| Cow position: | chr2:32640195-32639934 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 171, 32 |
| Conread position: | 6-283 |
| Cow position: | chr2:81258427-81258148 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 205 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 171, 28 |
| Conread position: | 7-283 |
| Cow position: | chr2:13553818-13553539 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 204 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 169, 9 |
| Conread position: | 9-270 |
| Cow position: | chr2:780161-780424 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 54, 20 |
| Conread position: | 10-283 |
| Cow position: | chr2:42361024-42361301 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 203 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 166, 18 |
| Conread position: | 11-283 |
| Cow position: | chr2:44933748-44934015 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 203 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 165, 24 |
| Conread position: | 12-275 |
| Cow position: | chr2:43446203-43445944 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 164, 16 |
| Conread position: | 12-279 |
| Cow position: | chr2:47602021-47602289 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 135, 23 |
| Conread position: | 12-281 |
| Cow position: | chr2:10731618-10731889 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 200 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 50, 13 |
| Conread position: | 12-281 |
| Cow position: | chr2:19012598-19012336 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 185 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 230, 23 |
| Conread position: | 12-283 |
| Cow position: | chr2:905506-905236 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 206 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 77, 22 |
| Conread position: | 12-283 |
| Cow position: | chr2:5903100-5903370 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 200 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 28, 34 |
| Conread position: | 12-283 |
| Cow position: | chr2:8119785-8119515 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 200 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 167, 25 |
| Conread position: | 12-283 |
| Cow position: | chr2:10184983-10185255 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 205 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 69, 26 |
| Conread position: | 12-283 |
| Cow position: | chr2:11157878-11158148 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 202 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 165, 22 |
| Conread position: | 12-283 |
| Cow position: | chr2:12223035-12223306 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 197 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 167, 23 |
| Conread position: | 12-283 |
| Cow position: | chr2:12362739-12363014 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 206 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 164, 16 |
| Conread position: | 12-283 |
| Cow position: | chr2:13044465-13044737 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 201 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 160, 23 |
| Conread position: | 12-283 |
| Cow position: | chr2:14824278-14824016 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 164, 17 |
| Conread position: | 12-283 |
| Cow position: | chr2:24925808-24925540 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 202 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 167, 23 |
| Conread position: | 12-283 |
| Cow position: | chr2:24926657-24926389 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 23 |
| Conread position: | 12-283 |
| Cow position: | chr2:28648366-28648637 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 165, 22 |
| Conread position: | 12-283 |
| Cow position: | chr2:32064795-32065066 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 22 |
| Conread position: | 12-283 |
| Cow position: | chr2:32656877-32656613 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 194 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 173, 23 |
| Conread position: | 12-283 |
| Cow position: | chr2:36981632-36981360 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 24 |
| Conread position: | 12-283 |
| Cow position: | chr2:41688010-41687739 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 164, 23 |
| Conread position: | 12-283 |
| Cow position: | chr2:47812093-47811821 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 165, 17 |
| Conread position: | 12-283 |
| Cow position: | chr2:50981905-50982169 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 160, 23 |
| Conread position: | 12-283 |
| Cow position: | chr2:52064002-52063731 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 202 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 165, 22 |
| Conread position: | 12-283 |
| Cow position: | chr2:53331045-53330765 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 203 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 12-283 |
| Cow position: | chr2:56888980-56888708 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 165, 23 |
| Conread position: | 12-283 |
| Cow position: | chr2:80291520-80291792 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 199 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 165, 23 |
| Conread position: | 15-283 |
| Cow position: | chr2:72187254-72187527 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 15, 152 |
| Conread position: | 16-283 |
| Cow position: | chr2:281448-281713 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 198 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 163, 19 |
| Conread position: | 16-283 |
| Cow position: | chr2:16074301-16074564 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 75, 19 |
| Conread position: | 16-283 |
| Cow position: | chr2:32457817-32458088 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 199 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 63, 133 |
| Conread position: | 20-283 |
| Cow position: | chr2:15575609-15575881 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 202 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 65, 20 |
| Conread position: | 24-252 |
| Cow position: | chr2:44650481-44650248 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 152, 15 |
| Conread position: | 28-279 |
| Cow position: | chr2:12328365-12328105 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 148, 7 |
| Conread position: | 34-274 |
| Cow position: | chr2:16291909-16291667 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 142, 11 |
| Conread position: | 35-281 |
| Cow position: | chr2:24471406-24471658 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 141, 60 |
| Conread position: | 37-235 |
| Cow position: | chr2:18242683-18242885 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 141, 48 |
| Conread position: | 37-270 |
| Cow position: | chr2:34563449-34563679 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 133, 53 |
| Conread position: | 37-283 |
| Cow position: | chr2:34052384-34052129 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 72, 46 |
| Conread position: | 37-283 |
| Cow position: | chr2:45938479-45938725 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 186 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 136, 199 |
| Conread position: | 37-283 |
| Cow position: | chr2:54694159-54693920 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 182 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 140, 83 |
| Conread position: | 38-281 |
| Cow position: | chr2:25887328-25887576 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 181 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 38-283 |
| Cow position: | chr2:2411566-2411811 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 172 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 147, 171 |
| Conread position: | 38-283 |
| Cow position: | chr2:10264189-10264435 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 177 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 139, 223 |
| Conread position: | 38-283 |
| Cow position: | chr2:47037212-47037462 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 41-276 |
| Cow position: | chr2:36029179-36029413 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 135, 163 |
| Conread position: | 41-283 |
| Cow position: | chr2:246670-246912 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 133, 104 |
| Conread position: | 46-236 |
| Cow position: | chr2:19226082-19225883 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 69-281 |
| Cow position: | chr2:9188844-9189054 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 145, 108 |
| Conread position: | 70-281 |
| Cow position: | chr2:10610456-10610672 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 70-283 |
| Cow position: | chr2:363879-364096 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 70-283 |
| Cow position: | chr2:3323376-3323594 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 70-283 |
| Cow position: | chr2:4401962-4402179 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 106, 26 |
| Conread position: | 70-283 |
| Cow position: | chr2:9909103-9908885 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 70-283 |
| Cow position: | chr2:9957884-9958102 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 70-283 |
| Cow position: | chr2:12696280-12696496 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 44, 40 |
| Conread position: | 70-283 |
| Cow position: | chr2:14209634-14209852 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 70-283 |
| Cow position: | chr2:26922616-26922398 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 70-283 |
| Cow position: | chr2:39422814-39422596 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 70-283 |
| Cow position: | chr2:51618452-51618231 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 70-283 |
| Cow position: | chr2:52617664-52617447 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 106, 15 |
| Conread position: | 70-283 |
| Cow position: | chr2:53541124-53540906 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 71-283 |
| Cow position: | chr2:2086981-2087198 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 75-283 |
| Cow position: | chr2:35357178-35356975 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 102, 41 |
| Conread position: | 77-265 |
| Cow position: | chr2:59412533-59412725 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 99, 8 |
| Conread position: | 77-266 |
| Cow position: | chr2:51397790-51397983 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 99, 18 |
| Conread position: | 79-283 |
| Cow position: | chr2:6005668-6005874 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 98, 21 |
| Conread position: | 79-283 |
| Cow position: | chr2:51988608-51988817 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 105-283 |
| Cow position: | chr2:25743692-25743510 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 72, 104 |
| Conread position: | 118-283 |
| Cow position: | chr2:26904614-26904785 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 127-274 |
| Cow position: | chr2:44990169-44990321 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 148-283 |
| Cow position: | chr2:17424970-17424830 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 28, 0 |
Show alignments to all cow chromosomes.