Cow genome map
| Conread name: | mE4-MI-P-E4-adc-g-11-1-UM.s1 |
| Conread position: | 6-283 |
| Cow position: | chr21:10568579-10568304 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 171, 32 |
| Conread position: | 12-281 |
| Cow position: | chr21:9893841-9893576 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 16 |
| Conread position: | 12-283 |
| Cow position: | chr21:2879953-2880220 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 165, 23 |
| Conread position: | 12-283 |
| Cow position: | chr21:5019015-5018741 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 8 |
| Conread position: | 12-283 |
| Cow position: | chr21:13298464-13298196 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 205 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 164, 23 |
| Conread position: | 12-283 |
| Cow position: | chr21:26837063-26836788 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 22, 45 |
| Conread position: | 12-283 |
| Cow position: | chr21:31514443-31514713 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 22 |
| Conread position: | 12-283 |
| Cow position: | chr21:33254054-33253784 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 200 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 68, 24 |
| Conread position: | 12-283 |
| Cow position: | chr21:33711022-33710750 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 165, 13 |
| Conread position: | 12-283 |
| Cow position: | chr21:47647205-47646936 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 201 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 67, 23 |
| Conread position: | 13-283 |
| Cow position: | chr21:28257293-28257031 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 163, 21 |
| Conread position: | 15-283 |
| Cow position: | chr21:147795-147525 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 194 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 162, 239 |
| Conread position: | 16-224 |
| Cow position: | chr21:7591529-7591318 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 150, 29 |
| Conread position: | 16-283 |
| Cow position: | chr21:10851950-10851679 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 196 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 161, 263 |
| Conread position: | 16-283 |
| Cow position: | chr21:30597602-30597867 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 201 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 161, 19 |
| Conread position: | 26-283 |
| Cow position: | chr21:6626395-6626130 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 36-283 |
| Cow position: | chr21:4588162-4588402 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 25, 36 |
| Conread position: | 37-274 |
| Cow position: | chr21:2539226-2539469 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 38-236 |
| Cow position: | chr21:36980161-36979959 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 133, 24 |
| Conread position: | 38-283 |
| Cow position: | chr21:40269821-40270071 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 39-283 |
| Cow position: | chr21:3780623-3780375 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 180 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 140, 161 |
| Conread position: | 41-251 |
| Cow position: | chr21:1688321-1688536 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 44-272 |
| Cow position: | chr21:18816410-18816642 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 128, 34 |
| Conread position: | 57-271 |
| Cow position: | chr21:30871-30654 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 119, 170 |
| Conread position: | 70-283 |
| Cow position: | chr21:5011897-5012110 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 107, 14 |
| Conread position: | 70-283 |
| Cow position: | chr21:6414205-6414423 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 70-283 |
| Cow position: | chr21:11507433-11507215 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 70-283 |
| Cow position: | chr21:19612579-19612361 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 166 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 70-283 |
| Cow position: | chr21:26635338-26635556 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 70-283 |
| Cow position: | chr21:37373045-37372836 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 70-283 |
| Cow position: | chr21:38802256-38802038 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 164 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 81-283 |
| Cow position: | chr21:30563479-30563275 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 7, 181 |
| Conread position: | 91-283 |
| Cow position: | chr21:28614126-28613929 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 113-283 |
| Cow position: | chr21:34822434-34822609 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 127-283 |
| Cow position: | chr21:5839426-5839585 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 50, 95 |
| Conread position: | 134-283 |
| Cow position: | chr21:12054262-12054416 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 146-283 |
| Cow position: | chr21:35145487-35145352 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 31, 112 |
Show alignments to all cow chromosomes.