Cow genome map
| Conread name: | mE4-MI-P-E4-adc-g-11-1-UM.s1 |
| Conread position: | 5-274 |
| Cow position: | chr22:5313999-5313725 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 17, 33 |
| Conread position: | 5-283 |
| Cow position: | chr22:6333415-6333143 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 174, 11 |
| Conread position: | 6-283 |
| Cow position: | chr22:34170044-34169769 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 204 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 171, 28 |
| Conread position: | 12-173 |
| Cow position: | chr22:44459358-44459196 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 158, 0 |
| Conread position: | 12-274 |
| Cow position: | chr22:34601289-34601032 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 158, 16 |
| Conread position: | 12-281 |
| Cow position: | chr22:31333347-31333616 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 202 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 50, 23 |
| Conread position: | 12-283 |
| Cow position: | chr22:297152-296876 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 109, 22 |
| Conread position: | 12-283 |
| Cow position: | chr22:538810-538540 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 170, 23 |
| Conread position: | 12-283 |
| Cow position: | chr22:559007-559275 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 205 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 167, 17 |
| Conread position: | 12-283 |
| Cow position: | chr22:1323852-1323582 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 204 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 164, 16 |
| Conread position: | 12-283 |
| Cow position: | chr22:1519331-1519593 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 191 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 165, 22 |
| Conread position: | 12-283 |
| Cow position: | chr22:3803882-3803611 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 22, 45 |
| Conread position: | 12-283 |
| Cow position: | chr22:11807046-11807311 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 17 |
| Conread position: | 12-283 |
| Cow position: | chr22:17326756-17327028 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 200 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 165, 23 |
| Conread position: | 12-283 |
| Cow position: | chr22:21591124-21590852 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 199 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 165, 23 |
| Conread position: | 12-283 |
| Cow position: | chr22:23752007-23752276 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 150, 24 |
| Conread position: | 12-283 |
| Cow position: | chr22:29011573-29011843 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 202 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 164, 22 |
| Conread position: | 12-283 |
| Cow position: | chr22:39467814-39468084 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 203 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 165, 26 |
| Conread position: | 12-283 |
| Cow position: | chr22:46615004-46614733 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 164, 26 |
| Conread position: | 13-283 |
| Cow position: | chr22:3304899-3305168 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 57 |
| Conread position: | 15-283 |
| Cow position: | chr22:23800534-23800787 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 187 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 172, 13 |
| Conread position: | 16-283 |
| Cow position: | chr22:37291980-37292244 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 201 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 161, 19 |
| Conread position: | 17-266 |
| Cow position: | chr22:29037358-29037119 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 153, 11 |
| Conread position: | 20-283 |
| Cow position: | chr22:521695-521963 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 193 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 31, 19 |
| Conread position: | 27-272 |
| Cow position: | chr22:13767048-13766803 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 149, 12 |
| Conread position: | 28-283 |
| Cow position: | chr22:38960795-38960536 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 178 |
| Conread position: | 31-174 |
| Cow position: | chr22:8880784-8880641 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 31-281 |
| Cow position: | chr22:1281048-1281302 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 181 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 142, 233 |
| Conread position: | 31-283 |
| Cow position: | chr22:8736663-8736912 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 191 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 145, 73 |
| Conread position: | 31-283 |
| Cow position: | chr22:15853109-15852853 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 141, 238 |
| Conread position: | 37-283 |
| Cow position: | chr22:21034709-21034960 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 38-283 |
| Cow position: | chr22:36859869-36860118 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 183 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 139, 53 |
| Conread position: | 38-283 |
| Cow position: | chr22:44367802-44368052 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 178 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 38-283 |
| Cow position: | chr22:44398109-44397861 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 186 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 141, 189 |
| Conread position: | 43-281 |
| Cow position: | chr22:15352545-15352305 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 183 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 134, 27 |
| Conread position: | 46-281 |
| Cow position: | chr22:30129252-30129015 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 130, 185 |
| Conread position: | 46-281 |
| Cow position: | chr22:30146901-30146664 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 176 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 130, 185 |
| Conread position: | 46-283 |
| Cow position: | chr22:13774188-13773950 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 130, 140 |
| Conread position: | 55-277 |
| Cow position: | chr22:30654186-30653960 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 32, 81 |
| Conread position: | 55-281 |
| Cow position: | chr22:12730031-12730264 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 57-283 |
| Cow position: | chr22:1268092-1268323 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 173 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 119, 158 |
| Conread position: | 63-270 |
| Cow position: | chr22:35905731-35905944 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 70-281 |
| Cow position: | chr22:3276709-3276925 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 70-283 |
| Cow position: | chr22:695260-695046 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 106, 149 |
| Conread position: | 70-283 |
| Cow position: | chr22:1880452-1880234 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 70-283 |
| Cow position: | chr22:6022300-6022082 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 167 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 70-283 |
| Cow position: | chr22:10908188-10908406 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 167 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 70-283 |
| Cow position: | chr22:16202561-16202343 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 70-283 |
| Cow position: | chr22:20239191-20239407 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 106, 147 |
| Conread position: | 70-283 |
| Cow position: | chr22:21194850-21195068 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 166 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 70-283 |
| Cow position: | chr22:27308130-27308348 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 70-283 |
| Cow position: | chr22:30677066-30677284 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 70-283 |
| Cow position: | chr22:32283034-32283252 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 164 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 70-283 |
| Cow position: | chr22:46580070-46580288 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 71-280 |
| Cow position: | chr22:36277230-36277010 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 71-281 |
| Cow position: | chr22:37268814-37268599 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 72-283 |
| Cow position: | chr22:42992821-42992605 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 164 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 94-283 |
| Cow position: | chr22:24952181-24951987 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 110-276 |
| Cow position: | chr22:44478350-44478179 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 113-254 |
| Cow position: | chr22:23508898-23509044 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 115-283 |
| Cow position: | chr22:18028890-18028718 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 59, 11 |
| Conread position: | 117-283 |
| Cow position: | chr22:18814764-18814935 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 148-282 |
| Cow position: | chr22:44366537-44366676 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 28, 0 |
Show alignments to all cow chromosomes.