Cow genome map
Conread name: | mE4-MI-P-E4-adc-g-11-1-UM.s1 |
Conread position: | 11-276 |
Cow position: | chr24:6323561-6323834 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 192 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 159, 18 |
Conread position: | 12-276 |
Cow position: | chr24:12149502-12149772 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 192 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 22, 39 |
Conread position: | 12-283 |
Cow position: | chr24:146822-147096 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 207 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 167, 26 |
Conread position: | 12-283 |
Cow position: | chr24:4413768-4414027 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 198 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 165, 21 |
Conread position: | 12-283 |
Cow position: | chr24:9545843-9545570 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 199 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 165, 22 |
Conread position: | 12-283 |
Cow position: | chr24:12127324-12127592 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 192 |
Alignm E-value: | 8e-30 |
Alignm gaps (pig, cow): | 67, 10 |
Conread position: | 12-283 |
Cow position: | chr24:12239078-12238800 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 198 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 23, 35 |
Conread position: | 12-283 |
Cow position: | chr24:12333951-12334215 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 188 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 25, 0 |
Conread position: | 12-283 |
Cow position: | chr24:13179234-13179504 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 190 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 50, 23 |
Conread position: | 12-283 |
Cow position: | chr24:16560523-16560798 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 201 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 105, 23 |
Conread position: | 12-283 |
Cow position: | chr24:19835194-19834920 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 206 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 165, 23 |
Conread position: | 12-283 |
Cow position: | chr24:41004273-41004002 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 196 |
Alignm E-value: | 6e-38 |
Alignm gaps (pig, cow): | 164, 22 |
Conread position: | 13-283 |
Cow position: | chr24:12087988-12087715 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 197 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 67, 25 |
Conread position: | 16-174 |
Cow position: | chr24:25438389-25438231 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 121 |
Alignm E-value: | 9e-31 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 16-243 |
Cow position: | chr24:17410246-17410011 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 161 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 102, 0 |
Conread position: | 16-272 |
Cow position: | chr24:19468821-19469073 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 184 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 160, 141 |
Conread position: | 16-283 |
Cow position: | chr24:6338169-6337899 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 202 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 154, 262 |
Conread position: | 16-283 |
Cow position: | chr24:12204557-12204825 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 187 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 153, 25 |
Conread position: | 19-282 |
Cow position: | chr24:6130593-6130328 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 198 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 158, 194 |
Conread position: | 20-283 |
Cow position: | chr24:22972845-22972579 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 201 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 159, 14 |
Conread position: | 21-283 |
Cow position: | chr24:8606603-8606332 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 206 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 52 |
Conread position: | 28-283 |
Cow position: | chr24:12569793-12569540 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 181 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 149, 162 |
Conread position: | 29-166 |
Cow position: | chr24:39679085-39678948 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 107 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 35-283 |
Cow position: | chr24:36723596-36723339 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 189 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 103, 237 |
Conread position: | 38-281 |
Cow position: | chr24:29189052-29188808 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 180 |
Alignm E-value: | 6e-38 |
Alignm gaps (pig, cow): | 139, 220 |
Conread position: | 38-281 |
Cow position: | chr24:33935153-33934902 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 177 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 138, 0 |
Conread position: | 38-283 |
Cow position: | chr24:6036754-6036505 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 181 |
Alignm E-value: | 8e-40 |
Alignm gaps (pig, cow): | 138, 233 |
Conread position: | 38-283 |
Cow position: | chr24:7089234-7089485 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 197 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 41, 48 |
Conread position: | 38-283 |
Cow position: | chr24:14755764-14755514 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 181 |
Alignm E-value: | 8.99998e-41 |
Alignm gaps (pig, cow): | 138, 0 |
Conread position: | 41-271 |
Cow position: | chr24:38639281-38639049 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 182 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 143, 0 |
Conread position: | 42-283 |
Cow position: | chr24:42584009-42584244 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 166 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 66, 0 |
Conread position: | 69-283 |
Cow position: | chr24:7063275-7063058 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 166 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 107, 0 |
Conread position: | 70-281 |
Cow position: | chr24:36557837-36558033 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 156 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 39, 0 |
Conread position: | 70-283 |
Cow position: | chr24:310601-310383 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 166 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 106, 0 |
Conread position: | 70-283 |
Cow position: | chr24:5991492-5991710 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 162 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 104, 0 |
Conread position: | 70-283 |
Cow position: | chr24:6023354-6023572 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 157 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 106, 0 |
Conread position: | 70-283 |
Cow position: | chr24:6963017-6963235 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 161 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 106, 0 |
Conread position: | 70-283 |
Cow position: | chr24:13043894-13044112 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 164 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 105, 0 |
Conread position: | 70-283 |
Cow position: | chr24:13233982-13233774 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 154 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 102, 0 |
Conread position: | 70-283 |
Cow position: | chr24:19703220-19703009 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 151 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 135, 91 |
Conread position: | 70-283 |
Cow position: | chr24:23504126-23504344 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 165 |
Alignm E-value: | 8.99998e-41 |
Alignm gaps (pig, cow): | 106, 0 |
Conread position: | 70-283 |
Cow position: | chr24:44019242-44019024 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 166 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 107, 0 |
Conread position: | 72-275 |
Cow position: | chr24:6658763-6658961 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 148 |
Alignm E-value: | 8e-30 |
Alignm gaps (pig, cow): | 104, 112 |
Conread position: | 72-283 |
Cow position: | chr24:6407764-6407550 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 165 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 9, 15 |
Conread position: | 72-283 |
Cow position: | chr24:14382897-14383112 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 164 |
Alignm E-value: | 8e-40 |
Alignm gaps (pig, cow): | 104, 172 |
Conread position: | 91-283 |
Cow position: | chr24:6142778-6142588 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 151 |
Alignm E-value: | 9e-31 |
Alignm gaps (pig, cow): | 84, 10 |
Conread position: | 97-283 |
Cow position: | chr24:6436190-6435999 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 141 |
Alignm E-value: | 9e-31 |
Alignm gaps (pig, cow): | 79, 0 |
Conread position: | 101-283 |
Cow position: | chr24:16083077-16083265 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 139 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 120-283 |
Cow position: | chr24:11151553-11151721 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 129 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 132-283 |
Cow position: | chr24:12699152-12699308 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 118 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 44, 0 |
Conread position: | 132-283 |
Cow position: | chr24:14388873-14389022 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 119 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 44, 82 |
Show alignments to all cow chromosomes.