Cow genome map
| Conread name: | mE4-MI-P-E4-adc-g-11-1-UM.s1 |
| Conread position: | 1-283 |
| Cow position: | chr4:14819464-14819741 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 201 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 145, 27 |
| Conread position: | 6-283 |
| Cow position: | chr4:17924523-17924803 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 199 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 171, 32 |
| Conread position: | 12-274 |
| Cow position: | chr4:46200301-46200561 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 134, 23 |
| Conread position: | 12-279 |
| Cow position: | chr4:33494985-33494717 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 196 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 165, 23 |
| Conread position: | 12-283 |
| Cow position: | chr4:605060-604788 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 193 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 164, 17 |
| Conread position: | 12-283 |
| Cow position: | chr4:1048834-1049101 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 193 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 165, 23 |
| Conread position: | 12-283 |
| Cow position: | chr4:3356504-3356775 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 202 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 165, 8 |
| Conread position: | 12-283 |
| Cow position: | chr4:4417482-4417215 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 190 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 22, 45 |
| Conread position: | 12-283 |
| Cow position: | chr4:6865078-6865349 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 190 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 162, 23 |
| Conread position: | 12-283 |
| Cow position: | chr4:16640040-16639768 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 14 |
| Conread position: | 12-283 |
| Cow position: | chr4:26876358-26876623 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 194 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 167, 23 |
| Conread position: | 12-283 |
| Cow position: | chr4:27335369-27335089 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 164, 26 |
| Conread position: | 12-283 |
| Cow position: | chr4:43318206-43318477 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 203 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 165, 23 |
| Conread position: | 12-283 |
| Cow position: | chr4:43882535-43882268 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 206 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 167, 23 |
| Conread position: | 12-283 |
| Cow position: | chr4:44727008-44726736 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 23 |
| Conread position: | 12-283 |
| Cow position: | chr4:44779791-44780062 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 193 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 164, 26 |
| Conread position: | 12-283 |
| Cow position: | chr4:47522779-47522516 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 187 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 161, 24 |
| Conread position: | 12-283 |
| Cow position: | chr4:57985421-57985150 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 201 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 160, 23 |
| Conread position: | 13-283 |
| Cow position: | chr4:12588758-12588490 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 202 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 164, 25 |
| Conread position: | 16-283 |
| Cow position: | chr4:10882974-10882712 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 200 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 162, 19 |
| Conread position: | 20-283 |
| Cow position: | chr4:33071417-33071676 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 191 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 124, 19 |
| Conread position: | 20-283 |
| Cow position: | chr4:67682621-67682355 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 198 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 157, 18 |
| Conread position: | 26-252 |
| Cow position: | chr4:14139791-14139564 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 139, 58 |
| Conread position: | 26-283 |
| Cow position: | chr4:20067307-20067565 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 239 |
| Conread position: | 31-268 |
| Cow position: | chr4:60262752-60262989 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 141, 14 |
| Conread position: | 31-283 |
| Cow position: | chr4:14755256-14755512 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 203 |
| Conread position: | 31-283 |
| Cow position: | chr4:28833129-28832878 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 192 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 141, 14 |
| Conread position: | 38-251 |
| Cow position: | chr4:6488958-6489176 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 38-254 |
| Cow position: | chr4:48028265-48028048 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 139, 43 |
| Conread position: | 38-274 |
| Cow position: | chr4:16361329-16361088 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 57, 61 |
| Conread position: | 38-283 |
| Cow position: | chr4:12239816-12240062 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 141, 223 |
| Conread position: | 38-283 |
| Cow position: | chr4:36897784-36897534 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 187 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 123, 82 |
| Conread position: | 38-283 |
| Cow position: | chr4:42406023-42405770 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 40-283 |
| Cow position: | chr4:9846801-9847049 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 183 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 46-283 |
| Cow position: | chr4:25598085-25598327 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 182 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 55-283 |
| Cow position: | chr4:41978006-41978237 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 122, 20 |
| Conread position: | 60-283 |
| Cow position: | chr4:45106853-45106624 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 69-278 |
| Cow position: | chr4:33022260-33022475 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 69-283 |
| Cow position: | chr4:1929265-1929477 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 145, 110 |
| Conread position: | 69-283 |
| Cow position: | chr4:41960276-41960058 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 167 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 107, 44 |
| Conread position: | 70-283 |
| Cow position: | chr4:5443449-5443667 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 70-283 |
| Cow position: | chr4:16060654-16060437 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 164 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 70-283 |
| Cow position: | chr4:17092487-17092704 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 106, 35 |
| Conread position: | 70-283 |
| Cow position: | chr4:17501955-17502173 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 70-283 |
| Cow position: | chr4:18423145-18423358 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 105, 130 |
| Conread position: | 70-283 |
| Cow position: | chr4:30472589-30472371 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 70-283 |
| Cow position: | chr4:32213548-32213327 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 70-283 |
| Cow position: | chr4:41956139-41955921 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 70-283 |
| Cow position: | chr4:54970082-54969874 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 159 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 70-283 |
| Cow position: | chr4:65665036-65665236 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 71-283 |
| Cow position: | chr4:5881530-5881317 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 106, 158 |
| Conread position: | 72-271 |
| Cow position: | chr4:51041918-51042118 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 158 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 104, 73 |
| Conread position: | 77-283 |
| Cow position: | chr4:14387189-14386979 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 99, 8 |
| Conread position: | 79-281 |
| Cow position: | chr4:1952200-1952407 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 79-283 |
| Cow position: | chr4:6567746-6567537 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 79-283 |
| Cow position: | chr4:18338221-18338012 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 118-281 |
| Cow position: | chr4:31563955-31564123 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 59, 0 |
Show alignments to all cow chromosomes.