Cow genome map
| Conread name: | mE4-MI-P-E4-adc-g-11-1-UM.s1 |
| Conread position: | 2-283 |
| Cow position: | chr6:58460641-58460920 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 205 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 175, 33 |
| Conread position: | 7-271 |
| Cow position: | chr6:6185921-6185656 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 71, 106 |
| Conread position: | 7-283 |
| Cow position: | chr6:8759620-8759897 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 202 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 170, 27 |
| Conread position: | 9-283 |
| Cow position: | chr6:12627372-12627101 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 20 |
| Conread position: | 12-249 |
| Cow position: | chr6:57471338-57471100 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 166, 23 |
| Conread position: | 12-251 |
| Cow position: | chr6:16591628-16591391 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 165, 22 |
| Conread position: | 12-270 |
| Cow position: | chr6:51731751-51731492 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 165, 22 |
| Conread position: | 12-271 |
| Cow position: | chr6:16599290-16599024 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 12-276 |
| Cow position: | chr6:10249937-10250199 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 195 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 164, 23 |
| Conread position: | 12-283 |
| Cow position: | chr6:49935-50205 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 22 |
| Conread position: | 12-283 |
| Cow position: | chr6:183873-184144 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 8 |
| Conread position: | 12-283 |
| Cow position: | chr6:477210-476937 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 199 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 165, 22 |
| Conread position: | 12-283 |
| Cow position: | chr6:1820958-1821228 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 192 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 165, 23 |
| Conread position: | 12-283 |
| Cow position: | chr6:3887847-3888114 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 165, 23 |
| Conread position: | 12-283 |
| Cow position: | chr6:11723528-11723794 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 165, 23 |
| Conread position: | 12-283 |
| Cow position: | chr6:21974339-21974069 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 167, 10 |
| Conread position: | 12-283 |
| Cow position: | chr6:24241074-24240806 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 202 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 165, 8 |
| Conread position: | 12-283 |
| Cow position: | chr6:27528349-27528617 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 165, 23 |
| Conread position: | 12-283 |
| Cow position: | chr6:28104193-28104465 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 156, 22 |
| Conread position: | 12-283 |
| Cow position: | chr6:30273223-30273495 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 23 |
| Conread position: | 12-283 |
| Cow position: | chr6:35875040-35875310 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 200 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 153, 23 |
| Conread position: | 12-283 |
| Cow position: | chr6:39333199-39333475 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 201 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 69, 26 |
| Conread position: | 12-283 |
| Cow position: | chr6:39911002-39910737 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 164, 23 |
| Conread position: | 12-283 |
| Cow position: | chr6:40865656-40865922 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 198 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 167, 22 |
| Conread position: | 12-283 |
| Cow position: | chr6:41229114-41228844 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 199 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 165, 17 |
| Conread position: | 12-283 |
| Cow position: | chr6:47041534-47041809 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 198 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 12-283 |
| Cow position: | chr6:50636541-50636268 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 149, 16 |
| Conread position: | 12-283 |
| Cow position: | chr6:51716203-51715931 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 200 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 165, 23 |
| Conread position: | 12-283 |
| Cow position: | chr6:52694696-52694426 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 195 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 164, 23 |
| Conread position: | 12-283 |
| Cow position: | chr6:64717992-64717719 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 165, 26 |
| Conread position: | 12-283 |
| Cow position: | chr6:65843286-65843014 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 197 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 165, 23 |
| Conread position: | 12-283 |
| Cow position: | chr6:67265554-67265282 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 194 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 153, 17 |
| Conread position: | 16-283 |
| Cow position: | chr6:5948113-5948383 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 198 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 139, 19 |
| Conread position: | 16-283 |
| Cow position: | chr6:15139507-15139775 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 200 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 161, 19 |
| Conread position: | 16-283 |
| Cow position: | chr6:38273239-38272968 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 194 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 150, 252 |
| Conread position: | 20-244 |
| Cow position: | chr6:16672966-16672753 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 26-281 |
| Cow position: | chr6:35418645-35418898 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 193 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 149, 234 |
| Conread position: | 31-275 |
| Cow position: | chr6:10645375-10645122 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 181 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 34-281 |
| Cow position: | chr6:47625714-47625463 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 210 |
| Conread position: | 38-279 |
| Cow position: | chr6:8203838-8203591 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 184 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 38-283 |
| Cow position: | chr6:1409733-1409984 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 38-283 |
| Cow position: | chr6:7139692-7139942 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 38-283 |
| Cow position: | chr6:25215866-25215616 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 185 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 38-283 |
| Cow position: | chr6:34890478-34890724 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 139, 115 |
| Conread position: | 38-283 |
| Cow position: | chr6:43619372-43619122 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 38-283 |
| Cow position: | chr6:65907140-65907389 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 139, 96 |
| Conread position: | 39-283 |
| Cow position: | chr6:55541608-55541857 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 137, 0 |
| Conread position: | 46-283 |
| Cow position: | chr6:3572235-3571993 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 130, 224 |
| Conread position: | 70-254 |
| Cow position: | chr6:17596679-17596868 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 44, 35 |
| Conread position: | 70-282 |
| Cow position: | chr6:2877067-2877284 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 70-282 |
| Cow position: | chr6:11871038-11871255 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 70-283 |
| Cow position: | chr6:329849-330065 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 106, 42 |
| Conread position: | 70-283 |
| Cow position: | chr6:3150852-3150633 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 70-283 |
| Cow position: | chr6:5749541-5749323 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 70-283 |
| Cow position: | chr6:13309762-13309980 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 70-283 |
| Cow position: | chr6:13848683-13848470 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 106, 20 |
| Conread position: | 70-283 |
| Cow position: | chr6:13945527-13945311 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 106, 14 |
| Conread position: | 70-283 |
| Cow position: | chr6:16053726-16053508 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 106, 50 |
| Conread position: | 70-283 |
| Cow position: | chr6:26669246-26669463 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 162 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 107, 85 |
| Conread position: | 70-283 |
| Cow position: | chr6:27171197-27170979 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 70-283 |
| Cow position: | chr6:28703093-28703311 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 165 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 70-283 |
| Cow position: | chr6:40276699-40276482 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 162 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 106, 191 |
| Conread position: | 70-283 |
| Cow position: | chr6:40379014-40379232 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 70-283 |
| Cow position: | chr6:44148932-44149149 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 70-283 |
| Cow position: | chr6:45587564-45587350 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 70-283 |
| Cow position: | chr6:47047564-47047782 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 165 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 72-277 |
| Cow position: | chr6:31199458-31199248 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 74-283 |
| Cow position: | chr6:28489956-28490168 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 102, 126 |
| Conread position: | 77-283 |
| Cow position: | chr6:28134518-28134308 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 82, 170 |
| Conread position: | 79-283 |
| Cow position: | chr6:43791962-43792170 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 93, 6 |
| Conread position: | 84-283 |
| Cow position: | chr6:49523789-49523585 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 104-283 |
| Cow position: | chr6:68028508-68028324 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 115-283 |
| Cow position: | chr6:28187248-28187421 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 121-279 |
| Cow position: | chr6:41553817-41553665 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 66, 11 |
Show alignments to all cow chromosomes.