Cow genome map

Conread name: mE4-MI-P-E4-ahd-g-01-1-UM.s1

Conread position: 1-194
Cow position: chr2:46303227-46303033 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 136
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 117, 136

Conread position: 1-200
Cow position: chr2:38375896-38376100 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 144
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 106, 182

Conread position: 1-201
Cow position: chr2:41763985-41764188 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 146
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 74, 68

Conread position: 1-219
Cow position: chr2:25961538-25961318 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 151
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 110, 158

Conread position: 1-219
Cow position: chr2:58565032-58564809 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 162
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 118, 0

Conread position: 1-239
Cow position: chr2:34502487-34502724 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 171
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 202, 118

Conread position: 1-243
Cow position: chr2:15241436-15241191 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 181
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 74, 68

Conread position: 1-250
Cow position: chr2:62502296-62502042 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 189
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 25, 39

Conread position: 1-251
Cow position: chr2:39119328-39119581 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 181
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 104, 120

Conread position: 1-259
Cow position: chr2:30816007-30815747 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 192
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 25, 17

Conread position: 1-266
Cow position: chr2:4340084-4340352 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 190
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 74, 68

Conread position: 1-266
Cow position: chr2:16327198-16326931 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 191
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 117, 159

Conread position: 1-266
Cow position: chr2:53332529-53332798 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 189
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 111, 0

Conread position: 1-268
Cow position: chr2:20977765-20978032 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 68

Conread position: 1-275
Cow position: chr2:6004110-6003834 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 186
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 117, 267

Conread position: 1-278
Cow position: chr2:68489602-68489319 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 138

Conread position: 1-281
Cow position: chr2:10123323-10123037 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 68

Conread position: 1-281
Cow position: chr2:14208119-14207839 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 202
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 117, 148

Conread position: 1-290
Cow position: chr2:4923307-4923011 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 0

Conread position: 1-297
Cow position: chr2:13067279-13066979 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 68

Conread position: 1-297
Cow position: chr2:16718177-16717873 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 0

Conread position: 1-297
Cow position: chr2:25885823-25885520 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 217
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 117, 179

Conread position: 1-297
Cow position: chr2:32417895-32417603 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 117

Conread position: 1-297
Cow position: chr2:42329671-42329380 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 202
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 263, 71

Conread position: 1-297
Cow position: chr2:45918046-45917740 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 0

Conread position: 1-298
Cow position: chr2:38659800-38659508 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 221
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 23, 18

Conread position: 1-300
Cow position: chr2:32432636-32432344 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 54

Conread position: 1-302
Cow position: chr2:16301647-16301950 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 216
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 109, 231

Conread position: 1-303
Cow position: chr2:3668786-3669094 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 213
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 117, 0

Conread position: 1-303
Cow position: chr2:12221566-12221261 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 216
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 117, 234

Conread position: 1-304
Cow position: chr2:5116674-5116973 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 207
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 266, 118

Conread position: 1-304
Cow position: chr2:10882161-10882470 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 68

Conread position: 1-304
Cow position: chr2:11726103-11726409 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 216
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 74, 68

Conread position: 1-304
Cow position: chr2:17265707-17265400 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 221

Conread position: 1-304
Cow position: chr2:21606267-21606577 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 217
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 103, 254

Conread position: 1-304
Cow position: chr2:44094093-44094400 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 59

Conread position: 1-304
Cow position: chr2:50431918-50431613 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 68

Conread position: 1-304
Cow position: chr2:52621501-52621810 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 0

Conread position: 1-304
Cow position: chr2:55876371-55876675 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 68

Conread position: 1-304
Cow position: chr2:58466400-58466705 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 220
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 74, 68

Conread position: 1-304
Cow position: chr2:81147257-81146944 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 220
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 69, 124

Conread position: 1-305
Cow position: chr2:209380-209071 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 216
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 117, 290

Conread position: 1-305
Cow position: chr2:981726-982035 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 289

Conread position: 1-305
Cow position: chr2:4805013-4804703 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 212
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 117, 0

Conread position: 1-305
Cow position: chr2:9714396-9714699 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 220
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 117, 148

Conread position: 1-305
Cow position: chr2:24876467-24876168 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 210
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 104, 142

Conread position: 1-305
Cow position: chr2:24928109-24928418 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 289

Conread position: 1-307
Cow position: chr2:6064760-6064451 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 59

Conread position: 1-307
Cow position: chr2:20856868-20856555 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 146

Conread position: 1-307
Cow position: chr2:77468469-77468171 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 225
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 16, 26

Conread position: 1-308
Cow position: chr2:21982030-21981714 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 0

Conread position: 1-308
Cow position: chr2:44476762-44476446 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 18

Conread position: 1-308
Cow position: chr2:67682510-67682827 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 217
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 104, 120

Conread position: 1-308
Cow position: chr2:78301669-78301360 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 204

Conread position: 1-312
Cow position: chr2:3623247-3623564 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 217
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 117, 0

Conread position: 1-312
Cow position: chr2:10609062-10608753 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 226
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 117, 165

Conread position: 1-312
Cow position: chr2:39424654-39424969 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 180
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 117, 290

Conread position: 1-312
Cow position: chr2:72940028-72939711 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 220
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 104, 120

Conread position: 1-313
Cow position: chr2:37324612-37324926 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 225
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 117, 157

Conread position: 1-313
Cow position: chr2:40772640-40772964 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 218
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 110, 0

Conread position: 1-313
Cow position: chr2:77859050-77859364 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 216
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 266, 118

Conread position: 1-314
Cow position: chr2:36997098-36997412 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 225
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 69, 145

Conread position: 1-317
Cow position: chr2:279518-279197 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 180

Conread position: 1-317
Cow position: chr2:8121422-8121750 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 230
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 117, 156

Conread position: 1-317
Cow position: chr2:9700250-9700576 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 0

Conread position: 1-317
Cow position: chr2:10262682-10262358 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 0

Conread position: 1-317
Cow position: chr2:11153255-11152929 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 0

Conread position: 1-317
Cow position: chr2:21169074-21169393 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 230
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 153, 194

Conread position: 1-317
Cow position: chr2:36983378-36983704 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 0

Conread position: 1-317
Cow position: chr2:53003478-53003158 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 93

Conread position: 1-318
Cow position: chr2:46182809-46182483 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 205

Conread position: 1-319
Cow position: chr2:24688406-24688722 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 68

Conread position: 1-319
Cow position: chr2:53556891-53557218 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 182

Conread position: 1-319
Cow position: chr2:57338681-57339002 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 215
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 121, 276

Conread position: 1-320
Cow position: chr2:13006037-13006353 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 25

Conread position: 1-320
Cow position: chr2:33251904-33251577 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 227
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 110, 83

Conread position: 1-321
Cow position: chr2:31410155-31409845 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 228
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 117, 182

Conread position: 1-322
Cow position: chr2:72757273-72757588 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 228
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 55, 48

Conread position: 1-323
Cow position: chr2:34501858-34502187 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 68

Conread position: 1-324
Cow position: chr2:28646900-28646566 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 0

Conread position: 1-328
Cow position: chr2:4833592-4833259 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 227
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 104, 68

Conread position: 1-328
Cow position: chr2:11792030-11792362 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 68

Conread position: 1-328
Cow position: chr2:48850516-48850182 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 229
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 117, 0

Conread position: 1-328
Cow position: chr2:49474627-49474961 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 234
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 74, 68

Conread position: 1-328
Cow position: chr2:84101944-84101606 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 232
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 117, 0

Conread position: 1-330
Cow position: chr2:2558598-2558264 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 68

Conread position: 1-330
Cow position: chr2:4742091-4742426 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 226
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 74, 68

Conread position: 1-330
Cow position: chr2:6528554-6528890 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 235
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 74, 67

Conread position: 1-330
Cow position: chr2:12752553-12752217 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 68

Conread position: 1-330
Cow position: chr2:17119352-17119016 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 0

Conread position: 1-330
Cow position: chr2:18350672-18350336 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 238
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 74, 68

Conread position: 1-330
Cow position: chr2:18521088-18520760 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 228
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 74, 68

Conread position: 1-330
Cow position: chr2:19049143-19048808 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 68

Conread position: 1-330
Cow position: chr2:26130143-26129807 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 68

Conread position: 1-330
Cow position: chr2:26905973-26906305 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 231
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 103, 246

Conread position: 1-330
Cow position: chr2:31047591-31047927 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 68

Conread position: 1-330
Cow position: chr2:31407619-31407283 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 232
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 74, 68

Conread position: 1-330
Cow position: chr2:38487102-38487438 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 68

Conread position: 1-330
Cow position: chr2:41156905-41157244 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 68

Conread position: 1-330
Cow position: chr2:43047044-43046708 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 68

Conread position: 1-330
Cow position: chr2:49461145-49461481 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 68

Conread position: 1-330
Cow position: chr2:49827812-49827476 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 68

Conread position: 1-330
Cow position: chr2:53542665-53543001 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 231
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 117, 0

Conread position: 1-330
Cow position: chr2:57587357-57587021 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 233
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 74, 68

Conread position: 1-330
Cow position: chr2:63707424-63707088 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 120

Conread position: 1-330
Cow position: chr2:72016541-72016877 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 68

Conread position: 1-334
Cow position: chr2:47182024-47181686 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 234
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 104, 120

Conread position: 1-334
Cow position: chr2:55481493-55481163 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 118

Conread position: 1-334
Cow position: chr2:62683391-62683728 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 17

Conread position: 1-334
Cow position: chr2:68422279-68422614 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 235
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 117, 158

Conread position: 1-344
Cow position: chr2:49301295-49300953 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 118

Conread position: 2-177
Cow position: chr2:53030818-53030997 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 128
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 83, 0

Conread position: 2-256
Cow position: chr2:36074113-36073870 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 186
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 101, 58

Conread position: 2-297
Cow position: chr2:27146381-27146078 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 218
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 113, 181

Conread position: 2-297
Cow position: chr2:41183746-41184046 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 288

Conread position: 2-298
Cow position: chr2:30909227-30909525 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 289

Conread position: 2-305
Cow position: chr2:105016-104709 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 218
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 116, 288

Conread position: 2-305
Cow position: chr2:63070562-63070254 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 217
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 116, 205

Conread position: 2-307
Cow position: chr2:35883742-35883427 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 221
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 109, 0

Conread position: 2-336
Cow position: chr2:28796573-28796911 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 237
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 109, 181

Conread position: 3-197
Cow position: chr2:56265682-56265875 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 141
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 115, 71

Conread position: 3-303
Cow position: chr2:56054477-56054775 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 32

Conread position: 4-307
Cow position: chr2:362796-362485 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 220
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 114, 166

Conread position: 4-344
Cow position: chr2:4917340-4916994 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 0

Conread position: 4-376
Cow position: chr2:43209868-43210240 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 261
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 264, 90

Conread position: 5-304
Cow position: chr2:2208936-2208632 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 213
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 113, 0

Conread position: 5-304
Cow position: chr2:2212760-2212456 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 0

Conread position: 5-304
Cow position: chr2:74469263-74468958 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 214
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 113, 0

Conread position: 5-312
Cow position: chr2:2181541-2181231 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 217
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 114, 170

Conread position: 5-326
Cow position: chr2:41009696-41009371 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 289

Conread position: 5-330
Cow position: chr2:57938125-57938461 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 0

Conread position: 11-290
Cow position: chr2:46940248-46939976 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 75

Conread position: 11-304
Cow position: chr2:29967599-29967300 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 58

Conread position: 11-304
Cow position: chr2:86496391-86496686 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 210
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 111, 58

Conread position: 11-307
Cow position: chr2:50060260-50059955 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 58

Conread position: 11-312
Cow position: chr2:36910408-36910101 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 58

Conread position: 11-330
Cow position: chr2:5606138-5606464 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 58

Conread position: 11-330
Cow position: chr2:19540695-19540369 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 58

Conread position: 11-330
Cow position: chr2:41300545-41300871 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 58

Conread position: 11-330
Cow position: chr2:64531026-64531352 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 58

Conread position: 16-312
Cow position: chr2:38207282-38206980 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 191

Conread position: 24-227
Cow position: chr2:48360696-48360902 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 156
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 59, 70

Conread position: 25-266
Cow position: chr2:2410091-2409852 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 176
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 78, 154

Conread position: 25-303
Cow position: chr2:74761636-74761915 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 199
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 93, 252

Conread position: 25-317
Cow position: chr2:17941301-17941004 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 265

Conread position: 26-316
Cow position: chr2:12238260-12237980 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 209
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 57, 68

Conread position: 28-302
Cow position: chr2:12199999-12199709 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 214
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 55, 224

Show alignments to all cow chromosomes.