Cow genome map
| Conread name: | mE4-MI-P-E4-ahd-g-01-1-UM.s1 |
| Conread position: | 1-197 |
| Cow position: | chr26:10011343-10011541 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 1-242 |
| Cow position: | chr26:3157336-3157580 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 183 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 74, 68 |
| Conread position: | 1-242 |
| Cow position: | chr26:3199592-3199836 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 182 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 74, 68 |
| Conread position: | 1-262 |
| Cow position: | chr26:3537343-3537607 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 193 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 74, 68 |
| Conread position: | 1-269 |
| Cow position: | chr26:46429-46158 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 25, 16 |
| Conread position: | 1-282 |
| Cow position: | chr26:8084047-8084334 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 68 |
| Conread position: | 1-296 |
| Cow position: | chr26:35423720-35424021 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 215 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 122, 93 |
| Conread position: | 1-297 |
| Cow position: | chr26:17393674-17393374 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 198, 118 |
| Conread position: | 1-297 |
| Cow position: | chr26:21012341-21012639 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 114, 65 |
| Conread position: | 1-297 |
| Cow position: | chr26:34030782-34031071 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 196 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 83, 106 |
| Conread position: | 1-303 |
| Cow position: | chr26:1390203-1390511 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 216 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 104, 120 |
| Conread position: | 1-304 |
| Cow position: | chr26:3230689-3230996 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 215 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 104, 120 |
| Conread position: | 1-304 |
| Cow position: | chr26:7559395-7559086 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 218 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 74, 68 |
| Conread position: | 1-304 |
| Cow position: | chr26:13806806-13806499 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 215 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 117, 225 |
| Conread position: | 1-304 |
| Cow position: | chr26:18857341-18857645 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 117, 169 |
| Conread position: | 1-304 |
| Cow position: | chr26:26286080-26286390 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 214 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 1-304 |
| Cow position: | chr26:28706837-28706533 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 211 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 266, 118 |
| Conread position: | 1-304 |
| Cow position: | chr26:34265185-34265494 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 219 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 74, 68 |
| Conread position: | 1-304 |
| Cow position: | chr26:35122021-35121713 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 217 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 104, 120 |
| Conread position: | 1-305 |
| Cow position: | chr26:17429254-17428945 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 289 |
| Conread position: | 1-307 |
| Cow position: | chr26:8739196-8738880 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 221 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 1-307 |
| Cow position: | chr26:12585317-12585005 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 218 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 74, 68 |
| Conread position: | 1-308 |
| Cow position: | chr26:22831815-22831501 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 224 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 122, 73 |
| Conread position: | 1-313 |
| Cow position: | chr26:8308543-8308215 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 236 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 111, 85 |
| Conread position: | 1-314 |
| Cow position: | chr26:15199249-15199564 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 280 |
| Conread position: | 1-317 |
| Cow position: | chr26:23590916-23591242 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 1-319 |
| Cow position: | chr26:16781395-16781718 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 277 |
| Conread position: | 1-328 |
| Cow position: | chr26:6843999-6843663 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 1-328 |
| Cow position: | chr26:22691611-22691940 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 231 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 117, 182 |
| Conread position: | 1-329 |
| Cow position: | chr26:386901-387242 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 1-329 |
| Cow position: | chr26:3833255-3833596 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 238 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 74, 68 |
| Conread position: | 1-329 |
| Cow position: | chr26:23889633-23889969 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 240 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 117, 179 |
| Conread position: | 1-330 |
| Cow position: | chr26:1343074-1342738 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 68 |
| Conread position: | 1-330 |
| Cow position: | chr26:35560840-35560506 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 68 |
| Conread position: | 3-296 |
| Cow position: | chr26:3700194-3700483 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 208 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 266, 103 |
| Conread position: | 4-264 |
| Cow position: | chr26:30625389-30625127 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 173 |
| Conread position: | 4-298 |
| Cow position: | chr26:1088408-1088699 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 77, 180 |
| Conread position: | 5-316 |
| Cow position: | chr26:25393013-25393332 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 11 |
| Conread position: | 11-304 |
| Cow position: | chr26:13183541-13183840 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 213 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 94, 110 |
| Conread position: | 11-306 |
| Cow position: | chr26:24238932-24239230 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 107 |
| Conread position: | 11-329 |
| Cow position: | chr26:20019332-20019655 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 58 |
| Conread position: | 16-334 |
| Cow position: | chr26:11269458-11269769 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 247 |
| Conread position: | 23-297 |
| Cow position: | chr26:14173306-14173588 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 24-316 |
| Cow position: | chr26:10699254-10698972 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 217 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 98, 69 |
| Conread position: | 25-304 |
| Cow position: | chr26:29433477-29433762 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 203 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 25-330 |
| Cow position: | chr26:26611701-26612013 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 222 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 50, 44 |
| Conread position: | 25-334 |
| Cow position: | chr26:13773296-13773608 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 99 |
Show alignments to all cow chromosomes.