Cow genome map

Conread name: mE4-MI-P-E4-ahe-h-07-1-UM.s1

Conread position: 1-253
Cow position: chr10:54890767-54891019 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 18

Conread position: 3-499
Cow position: chr10:27173679-27174173 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 321
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 16, 200

Conread position: 4-651
Cow position: chr10:23542783-23543446 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 428
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 13, 102

Conread position: 17-534
Cow position: chr10:51213612-51213109 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 342
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 45, 11

Conread position: 38-538
Cow position: chr10:30547959-30548446 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 329
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 80, 163

Conread position: 39-207
Cow position: chr10:66745992-66746160 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 119
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 10, 146

Conread position: 39-508
Cow position: chr10:34663773-34664240 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 311
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 20, 95

Conread position: 39-514
Cow position: chr10:25923097-25922624 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 315
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 20, 170

Conread position: 39-518
Cow position: chr10:26588849-26588374 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 303
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 22, 47

Conread position: 39-533
Cow position: chr10:59274536-59274041 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 349
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 22, 175

Conread position: 39-535
Cow position: chr10:65810162-65810655 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 94

Conread position: 39-538
Cow position: chr10:10859540-10860035 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 70

Conread position: 39-545
Cow position: chr10:28718322-28717821 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 331
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 22, 164

Conread position: 39-546
Cow position: chr10:33344561-33344051 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 10

Conread position: 39-552
Cow position: chr10:6349004-6348501 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 345
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 18, 6

Conread position: 39-558
Cow position: chr10:2738197-2737673 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 345
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 25, 156

Conread position: 40-558
Cow position: chr10:277353-277867 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 328
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 19, 93

Conread position: 40-558
Cow position: chr10:23413046-23412537 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 343
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 19, 73

Conread position: 41-504
Cow position: chr10:56736401-56735957 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 309
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 18, 100

Conread position: 51-537
Cow position: chr10:8517943-8518418 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 321
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 36, 151

Conread position: 51-540
Cow position: chr10:42430513-42431003 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 328
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 148, 37

Conread position: 59-477
Cow position: chr10:47700039-47699635 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 270
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 207, 101

Conread position: 59-539
Cow position: chr10:18389472-18389943 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 321
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 64, 77

Conread position: 62-474
Cow position: chr10:50961935-50961522 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 271
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 17, 75

Conread position: 63-284
Cow position: chr10:46256124-46255907 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 148
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 75, 0

Conread position: 63-480
Cow position: chr10:2187892-2188302 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 268
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 203, 56

Conread position: 63-544
Cow position: chr10:31047787-31047325 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 313
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 88, 19

Conread position: 66-551
Cow position: chr10:7501192-7500718 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 136

Conread position: 66-557
Cow position: chr10:24337008-24336541 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 316
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 161, 136

Conread position: 88-507
Cow position: chr10:53210708-53211122 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 281
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 140, 37

Conread position: 89-557
Cow position: chr10:14902262-14901797 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 114

Conread position: 90-469
Cow position: chr10:53204127-53203750 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 240
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 110, 131

Conread position: 101-428
Cow position: chr10:63850266-63849951 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 220
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 65, 60

Conread position: 111-551
Cow position: chr10:20125281-20124848 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 300
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 122, 89

Conread position: 119-538
Cow position: chr10:54159706-54159297 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 274
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 122, 142

Conread position: 119-543
Cow position: chr10:61882580-61882158 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 276
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 81, 89

Conread position: 120-491
Cow position: chr10:50980962-50980596 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 246
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 110, 79

Conread position: 121-551
Cow position: chr10:53794160-53794577 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 289
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 107, 80

Conread position: 163-496
Cow position: chr10:31182293-31182629 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 231
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 35, 45

Conread position: 525-668
Cow position: chr10:54891649-54891789 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 118
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 52, 73

Show alignments to all cow chromosomes.