Cow genome map
| Conread name: | mE4-MI-P-E4-ahe-h-07-1-UM.s1 |
| Conread position: | 17-508 |
| Cow position: | chr3:53568676-53568191 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 317 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 44, 12 |
| Conread position: | 37-551 |
| Cow position: | chr3:64646948-64646432 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 339 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 191, 7 |
| Conread position: | 38-428 |
| Cow position: | chr3:36727892-36727498 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 262 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 24, 212 |
| Conread position: | 38-535 |
| Cow position: | chr3:72390775-72390282 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 322 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 41, 71 |
| Conread position: | 38-564 |
| Cow position: | chr3:14051395-14050882 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 341 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 21, 56 |
| Conread position: | 39-480 |
| Cow position: | chr3:59465875-59465429 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 291 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 20, 167 |
| Conread position: | 39-486 |
| Cow position: | chr3:29328074-29328519 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 284 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 20, 94 |
| Conread position: | 39-558 |
| Cow position: | chr3:49604588-49605098 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 50 |
| Conread position: | 39-558 |
| Cow position: | chr3:68888713-68889229 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 334 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 20, 94 |
| Conread position: | 40-400 |
| Cow position: | chr3:28947029-28947388 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 28, 157 |
| Conread position: | 40-510 |
| Cow position: | chr3:21652853-21652380 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 306 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 26, 161 |
| Conread position: | 51-543 |
| Cow position: | chr3:66133982-66134469 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 148 |
| Conread position: | 51-546 |
| Cow position: | chr3:66409419-66409895 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 336 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 10, 144 |
| Conread position: | 59-514 |
| Cow position: | chr3:62911027-62911482 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 291 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 171, 142 |
| Conread position: | 61-508 |
| Cow position: | chr3:30004146-30003710 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 308 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 174, 104 |
| Conread position: | 63-485 |
| Cow position: | chr3:71225458-71225870 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 274 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 266, 116 |
| Conread position: | 65-538 |
| Cow position: | chr3:13470919-13471392 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 307 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 301, 129 |
| Conread position: | 65-557 |
| Cow position: | chr3:56493828-56494335 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 318 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 201, 123 |
| Conread position: | 71-405 |
| Cow position: | chr3:80631362-80631693 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 129, 79 |
| Conread position: | 72-471 |
| Cow position: | chr3:72872152-72871750 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 263 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 227, 111 |
| Conread position: | 83-388 |
| Cow position: | chr3:58105082-58104770 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 17, 123 |
| Conread position: | 88-537 |
| Cow position: | chr3:58013432-58012989 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 302 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 178, 110 |
| Conread position: | 93-487 |
| Cow position: | chr3:73944944-73945353 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 282 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 65, 7 |
| Conread position: | 93-538 |
| Cow position: | chr3:43483594-43483145 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 304 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 107, 42 |
| Conread position: | 104-389 |
| Cow position: | chr3:67451939-67451655 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 199 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 45, 50 |
| Conread position: | 110-480 |
| Cow position: | chr3:11543140-11542772 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 258 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 90, 97 |
| Conread position: | 122-625 |
| Cow position: | chr3:12768388-12767882 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 326 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 74, 146 |
| Conread position: | 155-538 |
| Cow position: | chr3:22867229-22867605 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 42, 53 |
Show alignments to all cow chromosomes.