Cow genome map


           Conread name:
           mE4-MI-P-E4-ahi-a-10-1-UM.s1
        

               Conread position:
               274-612
               

               Cow position:
               chr5:23683659-23683323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               236
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               22, 82
               

               Conread position:
               372-615
               

               Cow position:
               chr5:6670637-6670391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               79, 36
               

               Conread position:
               372-620
               

               Cow position:
               chr5:38286612-38286872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               374-558
               

               Cow position:
               chr5:27903942-27904128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               376-624
               

               Cow position:
               chr5:51293214-51292957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               76, 14
               

               Conread position:
               378-627
               

               Cow position:
               chr5:59505884-59505627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               74, 114
               

               Conread position:
               396-606
               

               Cow position:
               chr5:7585008-7584789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               56, 16
               
Show alignments to all cow chromosomes.