Cow genome map


           Conread name:
           mE4-MI-P-E4-ahi-a-10-1-UM.s1
        

               Conread position:
               365-598
               

               Cow position:
               chr6:19443125-19443363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               365-620
               

               Cow position:
               chr6:27477527-27477787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               87, 135
               

               Conread position:
               371-576
               

               Cow position:
               chr6:17456401-17456609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               84, 127
               

               Conread position:
               372-538
               

               Cow position:
               chr6:208684-208847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               80, 43
               

               Conread position:
               372-617
               

               Cow position:
               chr6:1077583-1077324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               372-620
               

               Cow position:
               chr6:2012555-2012803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               80, 100
               

               Conread position:
               372-630
               

               Cow position:
               chr6:10332576-10332312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               81, 117
               

               Conread position:
               373-620
               

               Cow position:
               chr6:47876-47621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               19, 131
               

               Conread position:
               376-612
               

               Cow position:
               chr6:66751422-66751651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               149, 53
               

               Conread position:
               379-607
               

               Cow position:
               chr6:38440502-38440740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               73, 110
               

               Conread position:
               400-598
               

               Cow position:
               chr6:33895694-33895491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               50, 40
               

               Conread position:
               431-608
               

               Cow position:
               chr6:24327550-24327363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               21, 0
               
Show alignments to all cow chromosomes.