Cow genome map
| Conread name: | mE4-MI-P-E4-ahi-a-10-1-UM.s1 |
| Conread position: | 275-629 |
| Cow position: | chrX:17200217-17200583 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 270 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 21, 81 |
| Conread position: | 280-596 |
| Cow position: | chrX:25163215-25163544 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 16, 76 |
| Conread position: | 365-598 |
| Cow position: | chrX:14908523-14908765 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 370-598 |
| Cow position: | chrX:31385234-31385468 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 66, 120 |
| Conread position: | 372-533 |
| Cow position: | chrX:17158309-17158147 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 372-598 |
| Cow position: | chrX:35223821-35224051 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 80, 137 |
| Conread position: | 372-599 |
| Cow position: | chrX:13785864-13785628 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 180 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 65, 122 |
| Conread position: | 372-607 |
| Cow position: | chrX:33631673-33631918 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 372-608 |
| Cow position: | chrX:22538435-22538195 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 80, 128 |
| Conread position: | 372-608 |
| Cow position: | chrX:22888177-22888417 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 176 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 80, 134 |
| Conread position: | 372-608 |
| Cow position: | chrX:35680864-35681094 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 80, 59 |
| Conread position: | 372-615 |
| Cow position: | chrX:13058078-13058330 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 191 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 81, 89 |
| Conread position: | 372-620 |
| Cow position: | chrX:4630181-4629920 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 373-612 |
| Cow position: | chrX:22115764-22115519 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 77, 21 |
| Conread position: | 374-615 |
| Cow position: | chrX:25575480-25575728 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 78, 160 |
| Conread position: | 374-615 |
| Cow position: | chrX:41122591-41122838 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 54, 124 |
| Conread position: | 374-620 |
| Cow position: | chrX:30180405-30180155 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 78, 126 |
| Conread position: | 375-615 |
| Cow position: | chrX:37066792-37067040 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 77, 205 |
| Conread position: | 377-608 |
| Cow position: | chrX:17265527-17265287 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 76, 31 |
| Conread position: | 384-608 |
| Cow position: | chrX:19228550-19228313 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 183 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 431-598 |
| Cow position: | chrX:41682933-41683110 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 441-608 |
| Cow position: | chrX:6277873-6277697 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 9, 0 |
Show alignments to all cow chromosomes.